- Transcript 'KH2012:KH.C5.61.v1.A...' >
- Transcript 'Boleac.CG.SB_v3.S129...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S129.g02101.01.t
Possible name(s)
DDX10; DDX18; DDX55
Gene model
Location
S129 [170,443 / 177,074]
Amino acid sequence
Length: 769
>Boleac.CG.SB_v3.S129.g02101.01.p
MSEDIASFEKWKQKKKSHKGNKKNDFVKKRKWVTEQKQIQEVIAKYSEFDVSKAQSFKDY
PLSSKTKMGLEKAGYSKPTAIQQASFTPAIQGRDVLGAAKTGSGKTLAFLIPVLECLYRE
RWSSIAGPGALIISPTRELAYQTFEVLKKIGQFHDFSAGLIIGGKDVKPEASRMTKTNIL
ICTPGRLLQHMDETVHFDMATLQILVLDEADRILDMGFKATLNAIIENLPHEKQTLLFSA
TQTKSVKDLARLSLKDPAYVAVHEKSKTSTPSGLIQNYISCKLEDKLNILYSFVKTHLKS
KTLVFLMSCKQVQYVYAAFCKLRPGVPTMMLHGQMKQMRRMAVYDEFCRKKFALLFCTDI
VARGLDFPAINWVVQFDCPEDAETYIHRAGRTARYHGQGHALLFLLESETESMLQQLEER
KVPITKTEINTEKITNIGPRLESFCAAELELKQKAQRCFVSYLRSVNLMKNKSVFSVQSL
PLAPYSASLGLAVTPRVRFLQRQRGKIVEKANLGTEEKSNIESEDHQSFDVGESGGEVAD
MFSVKSKNVFNEKDQDSDEEDKKTQKRSADMAITKVGAIKKLLKKKYKFNQKIVFDEEGE
LAEAWPPVDPKAYEEGMKEAEENLPGLDIERAKAEMKERDKIDMRQHKLKVKQRHQESRW
KEKESRREQQAVKEGRSREKTEDEAVAYLGSESEGDGDSDDNFDQISGDADRIYSESGDD
NSESEMPAKRLKRAPSPNKAEETFTQLMDDDDGHSLKDDEKLALYLLQR
Nucleotide sequence
Length: 2,652
>Boleac.CG.SB_v3.S129.g02101.01.t
CTCTTATATAAGCCTATGAGCTTGTCTTTGATAATTTGCCAGTAAAGCTCTGTGGTCAAG
CCGTTGATATGAGTGAAGATATTGCAAGCTTTGAAAAGTGGAAACAGAAAAAGAAGTCAC
ATAAAGGAAATAAGAAAAATGATTTTGTGAAGAAGCGCAAATGGGTTACAGAACAGAAGC
AAATCCAAGAGGTTATAGCAAAATACAGCGAGTTTGATGTATCAAAAGCGCAGTCTTTCA
AAGATTATCCATTATCGTCTAAGACAAAAATGGGTCTGGAAAAAGCTGGATATTCAAAGC
CAACTGCTATTCAACAAGCTTCCTTCACCCCAGCTATCCAGGGAAGAGATGTATTAGGTG
CTGCAAAAACGGGTTCGGGAAAAACGTTAGCTTTTCTAATCCCGGTGCTCGAGTGTCTTT
ACAGGGAGCGCTGGAGCTCAATTGCGGGACCTGGTGCTCTCATCATTTCTCCAACGCGAG
AGCTCGCTTATCAAACCTTTGAAGTGTTGAAAAAGATTGGTCAATTCCATGATTTCTCAG
CTGGTTTGATAATTGGTGGAAAAGATGTGAAGCCTGAGGCATCTAGAATGACAAAAACTA
ACATTCTTATTTGTACCCCTGGTAGATTGTTACAACACATGGACGAAACTGTTCACTTCG
ATATGGCTACTCTACAGATTTTAGTGCTTGATGAAGCAGATAGGATCTTGGATATGGGAT
TTAAAGCCACTCTAAATGCAATCATTGAAAATCTTCCTCATGAAAAGCAGACACTTCTAT
TTTCTGCAACACAAACAAAATCTGTCAAAGACCTGGCAAGATTGAGTTTGAAAGATCCTG
CGTATGTTGCTGTGCATGAAAAATCCAAAACAAGCACGCCTTCTGGATTGATCCAAAATT
ATATTTCATGCAAATTGGAGGACAAATTGAATATTTTGTATTCATTCGTGAAAACTCATC
TCAAATCAAAAACCTTGGTGTTTCTGATGTCGTGTAAACAAGTGCAGTATGTGTACGCTG
CTTTTTGCAAGTTACGTCCCGGTGTTCCAACTATGATGCTCCATGGCCAAATGAAGCAAA
TGCGAAGGATGGCAGTATATGATGAGTTTTGTAGGAAGAAGTTTGCCTTATTGTTCTGCA
CCGATATTGTCGCCAGAGGATTAGATTTTCCCGCAATCAACTGGGTTGTGCAGTTTGATT
GTCCAGAAGATGCGGAAACATATATTCACCGAGCAGGCCGAACGGCTCGCTATCATGGCC
AGGGCCATGCTCTCTTATTCCTACTTGAATCAGAAACAGAAAGCATGCTTCAACAATTGG
AGGAAAGAAAGGTTCCAATTACCAAAACTGAAATCAACACAGAAAAAATCACTAACATTG
GACCAAGACTTGAATCGTTTTGTGCTGCTGAGTTGGAATTGAAGCAGAAAGCACAGAGAT
GTTTCGTGTCGTATTTGAGATCAGTAAATTTGATGAAGAACAAATCGGTATTCTCAGTGC
AATCTCTTCCACTCGCTCCTTATTCAGCTTCTCTTGGACTTGCAGTTACCCCAAGAGTGA
GGTTTCTACAGCGACAAAGGGGTAAAATAGTGGAGAAAGCTAATCTTGGGACAGAGGAAA
AGTCCAATATTGAAAGTGAAGATCACCAGTCTTTTGACGTTGGCGAATCTGGTGGCGAGG
TTGCAGACATGTTTTCTGTGAAAAGTAAGAATGTTTTCAACGAGAAGGATCAAGATTCTG
ATGAAGAGGACAAAAAGACGCAGAAACGCTCGGCTGATATGGCGATCACGAAAGTGGGAG
CGATTAAAAAGTTGTTGAAAAAGAAGTATAAGTTTAACCAGAAGATTGTGTTTGATGAGG
AGGGAGAGCTTGCTGAAGCATGGCCTCCTGTTGATCCAAAGGCTTATGAAGAAGGAATGA
AGGAGGCTGAAGAAAATCTTCCCGGTCTTGACATTGAACGAGCAAAGGCCGAAATGAAAG
AACGAGACAAGATCGATATGAGGCAACATAAATTGAAAGTGAAACAACGGCATCAAGAAA
GCAGATGGAAGGAAAAGGAGTCACGGCGAGAGCAGCAGGCTGTGAAAGAAGGGCGCTCAC
GTGAAAAGACAGAAGACGAGGCTGTGGCGTATCTTGGGTCGGAAAGTGAAGGTGATGGTG
ACAGCGATGACAACTTTGACCAAATATCAGGTGATGCAGACAGGATTTATTCTGAGTCAG
GCGATGATAATTCTGAGAGTGAAATGCCTGCAAAGCGTTTGAAACGGGCCCCGTCCCCTA
ATAAGGCGGAAGAAACATTCACACAGTTAATGGATGATGATGATGGGCATTCGTTGAAGG
ATGATGAAAAATTAGCATTGTATTTATTGCAACGGTAGCATCTGGTGCATGAAAATAGTT
ATCAATGTCACACAGCATCGCGTCTAATATCCGGGGTCTGATACAGGGATGTCTCGACAT
CCCTGGGCTGATAATAGAGAAGATTTTTGTGCTCGTAGACGCGCAGAATATCTGACCCAG
AAATGAAGACGTGGCGCTCCGATTTTCCCTTAATATCTCGTGAAATATACATGCATATTG
AGCTGACACCACTGCCACCTGGTTTATTGGCTGTTGAGATTGCAGAGACGGGCTACTGTA
AATGTGCGGTCT
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[55-83] 10.345 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[74-277] 4.1E-54 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[79-249] 2.3E-47 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[86-260] 31.213 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[127-415] 1.59E-64 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[206-214] . |
| CDD |
Helicase_C (IPR001650) - T[274-404] 1.11267E-31 |
| Pfam |
Helicase_C (IPR001650) - T[285-395] 1.1E-23 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[286-435] 19.99 |
| SMART |
Helicase_C (IPR001650) - T[314-396] 8.6E-26 |
| SMART |
DUF4217 (IPR025313) - T[436-499] 1.8E-20 |
| Pfam |
DUF4217 (IPR025313) - T[439-497] 1.4E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX10_HUMAN | 62.874 % | 660 | 0 |
| DDX18_HUMAN | 43.508 % | 369 | 1.24E-117 |
| DDX55_HUMAN | 39.207 % | 293 | 2.07E-89 |