Aniseed - Transcript Card

Clone 'cien132333' >
Transcript 'Boleac.CG.SB_v3.S131...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S1311.g02255.01.t

Possible name(s)

TNR; TNXB

Gene model

Boleac.CG.SB_v3.S1311.g02255

Location

S1311 [1,637 / 7,750]

Sequences

Amino acid sequence

Length: 268

>Boleac.CG.SB_v3.S1311.g02255.01.p
MSSQINIVRRDWCVENGLPRENVKCLAECMLKFQSFPNQEHRNVVRGIEKKANANKITTS
CRGVNLASAKSRNETGGVFDIAIPGVGTKEVYCNTEIDGGGWIVFQRRMDGSVEFYRNWN
EYVSGFGNPRGEYGLGLDAIHRLTKSGGVELRIDMIDLNGISIMPSTGFDLSSRSMQFPN
RTFFSQLQTDRLGIDRFLFHTSAPFSTKDRDNDPSPLQCAHFHNGGWWYDDCAESNLNGV
YGRTDHSGFWWYGKTNMRFTEMLLRKEV

Nucleotide sequence

Length: 807

>Boleac.CG.SB_v3.S1311.g02255.01.t
ATGTCATCACAGATAAATATTGTTCGAAGAGATTGGTGCGTGGAAAATGGGTTGCCACGG
GAAAATGTGAAGTGTCTCGCGGAATGCATGTTAAAATTTCAAAGTTTTCCCAATCAGGAG
CACAGAAATGTCGTTCGTGGAATTGAAAAGAAAGCGAATGCGAATAAAATTACCACCAGT
TGTCGTGGCGTCAACCTCGCATCAGCGAAATCCCGAAACGAGACAGGAGGGGTGTTTGAT
ATCGCAATTCCCGGAGTAGGAACGAAGGAAGTTTACTGCAACACTGAGATTGATGGAGGA
GGTTGGATCGTTTTTCAACGAAGAATGGACGGAAGCGTCGAATTTTACCGGAATTGGAAT
GAATACGTCTCTGGATTCGGAAATCCGAGAGGAGAATATGGGCTCGGATTGGATGCAATC
CACCGACTGACAAAGAGCGGCGGCGTTGAACTGAGAATCGACATGATTGATCTAAACGGA
ATTTCTATTATGCCAAGTACAGGTTTCGACTTATCGTCACGATCAATGCAATTTCCAAAT
CGGACCTTCTTCAGCCAACTACAGACTGACCGTCTGGGGATAGACCGATTTTTATTTCAT
ACTAGTGCGCCGTTCTCGACAAAAGACCGCGACAACGATCCTTCACCCCTGCAATGCGCT
CATTTCCATAACGGAGGTTGGTGGTACGACGACTGTGCCGAAAGCAATCTGAATGGTGTT
TACGGAAGGACGGATCATAGTGGATTTTGGTGGTACGGAAAAACCAACATGAGATTCACT
GAGATGTTATTGAGAAAGGAAGTGTGA

InterProScan

Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[24-169] 2.4E-34
ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[52-268] 36.159
SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[61-267] 1.4E-44
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[67-265] 3.93E-54
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[88-265] 3.4E-43
Gene3D	Fibrinogen_a/b/g_C_2 (IPR014715) - T[195-260] 2.1E-17
ProSitePatterns	Fibrinogen_CS (IPR020837) - T[227-239] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TENR_HUMAN	40.609 %	140	1.58E-37
TENX_HUMAN	38.889 %	138	8.65E-37
FBCD1_HUMAN	41.711 %	134	2.04E-36