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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  3. Transcript 'KH2012:KH.C1.650.v2....' > 
  4. Transcript 'Boleac.CG.SB_v3.S13....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S13.g02155.01.t

Possible name(s)

YTHDF1; YTHDF2; YTHDF3

Gene model

Boleac.CG.SB_v3.S13.g02155

Location

S13 [304,891 / 312,687]

Sequences

Amino acid sequence

Length: 799

>Boleac.CG.SB_v3.S13.g02155.01.p
MSDVTSHQGGEAPQNGFGGKDGMQEEFSSYIQPSSQQPNYGFAPSESYIPNFYGQMPFPS
YMGGEWSTAGESMSYMPHGYGNIGNGEPHRSFVQEPMFXQQSNAIGNGQAYFNTPVFQQQ
TNDFNAWTSPSSHTGLDVGVGHQSGPSNYNGDFYHQILPTMPQDYLERNEYVSNSNAIGS
GHGQPAEFMSSVFSGGDGINKMSATTSSMHTLEHGIQNLMTNAGTVNEPPSNIAQPSINS
GSQLPDTPNQQVDYTNSQVPVKLNSVNSNVQPATPNKPISWAAIASKPAKPQAKPKPKVA
VGLPPPVKHSVDSANWDGNKPMARGMSGSQAAARNFGWNGAKMPNQPLEDGEEEDSRTDK
DESKSGNAAGSQPAHPVLDKLKLQNEYNPKRLTMDLRNSRFFVIKSYSEDDIHRSIKYNI
WCSTEHGNKRLDTTFRAQKNRGPVILLYSVNGSGHFCGVAEMKTCVDYSGRPGVWSQDKW
KGQFQVKWIYVKDVPNTVLRHIRLENNDNKPVTNSRDTQEVPAEKGRQVLKIIANYKHQT
SIFDDFGHYERRQQEEEDMKTRATQAVSNREKKTTDSHTPYAVRNTTSYSSTRRESKLLV
SFSDRYLSIFVTFCVFTLSSAAGSSTVSYPAGSAEVSAKCYRSQRKNDPPYLLTRTVKSI
DDSVDITRHWSCAAGIDVYCNHAAGLLYFMAHCKKMNFTPTLPDEISCTSMREQWSVPRG
KKIGNEEIQHVKVKKIQPRMQLMTERKEREEEEILAVKSQIICDGMCVWTLKFEAFVIFR
PQAPFNVGGTRILTILSHP

Nucleotide sequence

Length: 3,316

>Boleac.CG.SB_v3.S13.g02155.01.t
TTGAATTCAAGTGCTAGGCACTAAGCAGTTTAACCAGTAGTAATTATATGCATCGATCTG
GTAATTACTTGTGATAGTAATGTCTGATGTAACATCTCATCAAGGTGGTGAAGCCCCACA
GAATGGTTTTGGTGGAAAAGACGGAATGCAAGAAGAATTTTCTAGTTACATCCAACCGTC
GTCACAGCAGCCCAATTATGGATTTGCACCGAGCGAGTCCTACATACCGAACTTTTATGG
ACAAATGCCTTTTCCATCCTACATGGGTGGTGAATGGTCGACAGCTGGAGAATCCATGTC
CTATATGCCTCATGGTTACGGCAACATAGGAAATGGAGAACCACATCGAAGTTTTGTTCA
AGAGCCAATGTTTAANCAACAAAGCAATGCTATTGGCAATGGACAAGCATATTTTAACAC
TCCAGTTTTCCAGCAGCAAACTAATGACTTTAATGCATGGACTTCACCATCGAGCCACAC
TGGCTTGGATGTCGGCGTGGGACATCAGAGCGGACCTAGCAACTACAACGGTGACTTTTA
TCACCAGATTTTGCCAACCATGCCCCAAGATTACCTTGAAAGAAATGAGTATGTTAGCAA
TTCAAATGCTATTGGTTCTGGACATGGACAACCTGCTGAATTCATGTCTAGCGTATTTTC
TGGTGGGGATGGTATCAATAAGATGTCAGCAACTACGAGTTCAATGCATACTTTAGAGCA
TGGTATCCAAAATCTCATGACCAATGCTGGAACGGTGAACGAACCTCCCAGCAATATTGC
TCAACCAAGCATTAATAGCGGTTCTCAACTACCTGATACGCCGAATCAGCAGGTGGATTA
TACCAATTCCCAGGTACCTGTCAAGTTGAACTCTGTTAATAGTAATGTTCAACCGGCAAC
TCCAAATAAACCCATATCATGGGCGGCGATTGCCTCAAAACCTGCTAAACCGCAAGCAAA
ACCCAAACCCAAGGTGGCTGTTGGGTTACCACCACCTGTCAAGCATAGTGTGGACTCTGC
TAATTGGGACGGTAATAAACCTATGGCAAGAGGTATGTCTGGATCGCAGGCTGCTGCTAG
AAACTTTGGATGGAATGGTGCAAAGATGCCTAATCAACCTTTGGAAGATGGTGAAGAAGA
AGATTCCAGAACAGATAAAGATGAATCAAAGTCTGGCAATGCTGCNGGATCTCAACCTGC
CCATCCTGTCCTCGACAAGCTGAAACTGCAGAACGAATACAACCCAAAGCGCCTGACTAT
GGACTTGCGCAATTCACGATTTTTCGTTATCAAGTCCTATTCTGAGGATGACATTCACCG
TTCTATCAAGTATAATATCTGGTGTTCAACAGAACATGGGAATAAACGATTGGATACAAC
ATTCCGTGCTCAAAAGAACCGTGGACCTGTGATCTTGCTCTATTCTGTTAACGGCTCTGG
ACATTTCTGTGGTGTTGCAGAAATGAAAACATGCGTGGATTACAGCGGTCGCCCTGGAGT
TTGGTCGCAGGATAAGTGGAAGGGACAGTTTCAAGTGAAGTGGATCTATGTTAAGGATGT
CCCGAACACTGTACTCCGGCATATCCGACTTGAAAATAACGATAATAAACCCGTTACTAA
TTCCCGTGACACACAAGAAGTGCCGGCTGAGAAAGGCCGCCAAGTGTTGAAGATAATCGC
AAATTACAAACACCAAACCAGCATTTTTGATGACTTTGGTCACTATGAACGTAGGCAGCA
AGAGGAAGAGGACATGAAGACCAGGGCTACTCAAGCAGTTTCAAATCGCGAAAAAAAGAC
TACAGATTCTCACACGCCATATGCTGTAAGGAACACCACATCGTATTCGTCAACGCGACG
TGAATCTAAACTACTAGTCTCGTTCTCTGACAGATATTTGAGTATTTTTGTAACGTTTTG
TGTTTTCACCTTGTCATCTGCCGCTGGTTCAAGTACAGTATCCTATCCAGCCGGGTCTGC
TGAAGTGTCTGCAAAATGCTACAGATCTCAAAGAAAGAATGATCCACCGTACCTACTCAC
ACGGACCGTGAAATCTATCGATGATTCAGTTGATATTACTAGACATTGGTCTTGTGCTGC
AGGCATTGATGTCTATTGCAATCATGCAGCCGGACTATTATACTTTATGGCCCATTGCAA
GAAAATGAACTTTACGCCTACTCTGCCAGATGAAATATCTTGCACAAGTATGAGAGAACA
GTGGAGTGTCCCCAGGGGAAAGAAAATTGGTAACGAGGAAATTCAACATGTTAAAGTGAA
GAAAATACAACCAAGGATGCAGTTGATGACTGAAAGGAAAGAAAGAGAAGAAGAAGAAAT
TCTGGCTGTGAAGTCTCAGATTATCTGCGATGGAATGTGTGTGTGGACACTAAAGTTTGA
GGCCTTTGTCATCTTTCGACCACAGGCCCCCTTTAATGTAGGGGGTACTCGAATACTCAC
AATCCTTTCACACCCTTGAATTAAGTCTCCCGTAGTACAATATGGAAAAAGTGGCAGGAA
GTTGCAGAAAAGGCTATTAGCAAGAAAACGAAGATGGAAGAGGATTGCGGGAGGGGAGGG
GGCAAAATGGAACGGGGGCTACAGTACTGTGCAAATTGTAGGATCGTCGACCCAAAGGGA
TACTTAGCACCTCTGGTGTTGGAAGGAAGGCTCATTTGGCCAATCAAGTTTTGGCAAAGA
TGGAAAAAGGGATATTACAATCATTGCAAGAAAGACAAAAATGGAATGCCACATTGTATA
GAGATTTGAAGGTCAATGATATTATATTTGTGGGAGATGACAATTTGCTGCTGGAGATTA
GTCAGAGTGGAACAAGTCTATCCGAATGAAGATGTTTGTGTCAGAAAAGCTCTGTTGTAT
TGGGACTCGACATTGGATGGTAGAGGAAGACGTACCCAGCAAGTGTTGCTTTTTGGAAGG
TCCAATACAAAAACTCATACTGCTGATGAAAGCAGAAGAACCACAACCAGGGTAATANCC
AACGAGGAGCCCTGTGTTGTTTGTTGATTTCGTTGAATTGTTTGNTGTTTAGAGATGCAC
TCATTTCTAGGGTAGCCTTGTGCCAATGCCGCAGTGCTATCGTCAGTTTTTAGTTGTGTA
TACGTGCACCTTGACTATTTCNAAGTATCTCTCGTACCACCATTTCACAGTTGCCGCCAA
CTCGTTTGAGTTTAGCCACCGTTCGTATATTAATTTCTCAATCCTACCTGGCTGTAGATT
ATGATTAGAGCATGTTACGACTGCAATTACAAATATACAACTACTTATCTTGATGCCGAG
ATAATCGGAAAGATGT

InterProScan

ProSiteProfiles
YTH_domain (IPR007275) - T[399-533] 45.667
Pfam
YTH_domain (IPR007275) - T[399-533] 1.0E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
YTHD1_HUMAN 41.391 % 344 3.57E-109
YTHD2_HUMAN 70.352 % 313 3.69E-97
YTHD3_HUMAN 74.719 % 300 4.33E-92