Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S1412.g02710.01.t

Possible name(s)

TAF6; TAF6L

Gene model

Boleac.CG.SB_v3.S1412.g02710

Location

S1412 [15 / 1,488]

Sequences

Amino acid sequence

Length: 490

>Boleac.CG.SB_v3.S1412.g02710.01.p
LSDDIVGALADDASYRLREVVCISAQFMKRSRRSCLRSSDVTKALELLNIPPVLGVDQGD
QPQFHSLEDDTGSYVHYIPEDTVKLANRKSELTIKPHSVEPTISSEWIYVDGEESHQRKL
GNERIVSAQLQDYFSNVVNAIVGGDKVARNEALLDLCKNSKINPLMPYFVNFAMNVKAVS
HDIDQLFVLXQTVHAVVRNHNLALLGYLKPLASSVLYCVLEPLTASINPNNDHWRLRDYG
SXIISLLVRNXRVRNVDXDXYISESISNILLDPTRPLCSHYGAIVTVTALGIDAITSILV
PNVLKYYHTSLKALVEENNNIDNNTLKEDAYKVIGLLLHALHKLFTXVWRXPNFXXTHXI
KLSXFYDQMTELFGDSXALRLPXFTKRDENDNHGKYAGLQLQPVFAKVPLHGNHFRSSXR
SXLFPXXQLRKRNISISVRRYRSSPSHHRVEYTHSPYFSLNLKLAYIGKSQSKFMKRVGN
GHIDLCDVIL

Nucleotide sequence

Length: 1,473

>Boleac.CG.SB_v3.S1412.g02710.01.t
TTGTCAGATGATATCGTCGGGGCTCTTGCTGATGATGCATCTTATCGGTTGAGAGAAGTT
GTATGCATATCTGCTCAGTTTATGAAAAGAAGCCGACGTAGCTGTCTCCGGTCATCAGAC
GTGACCAAGGCGTTGGAATTACTCAATATACCACCAGTTTTAGGGGTTGATCAAGGTGAT
CAGCCACAATTCCACAGTCTCGAAGATGACACAGGAAGTTATGTTCATTATATACCTGAA
GATACTGTCAAACTTGCCAACAGAAAGTCAGAGCTAACAATCAAGCCCCATTCCGTCGAG
CCTACAATTTCATCAGAATGGATCTATGTTGACGGAGAAGAGTCGCATCAAAGGAAGCTG
GGCAATGAAAGAATAGTTTCAGCACAACTACAAGACTATTTTTCTAATGTTGTTAACGCC
ATTGTGGGGGGAGACAAAGTTGCCAGAAATGAAGCGCTCCTCGATCTTTGCAAGAACAGT
AAAATTAATCCTTTGATGCCTTATTTTGTTAATTTTGCCATGAATGTTAAAGCTGTTAGT
CATGACATTGATCAGTTGTTTGTGCTATTNCAAACTGTGCACGCAGTAGTAAGAAATCAT
AATCTTGCTTTGTTAGGTTACTTGAAGCCTCTTGCTTCATCAGTACTTTACTGTGTATTG
GAACCCCTTACTGCCTCTATCAATCCCAATAACGACCATTGGAGACTGAGAGACTACGGA
AGCNGGATCATATCATTATTGGTCAGAAACNATAGAGTTAGGAATGTGGATTTNGATCNN
TATATAAGTGAATCTATATCGAATATTCTTCTTGATCCTACTAGACCGCTTTGCTCNCAT
TATGGTGCAATTGTGACGGTGACTGCNTTAGGTATTGATGCTATCACATCAATTTTGGTT
CCTAACGTATTGAAGTACTACCATACGTCATTGAAGGCTTTGGTGGAAGAAAACAATAAT
ATTGACAACAATACCCTAAAGGAGGATGCATATAAAGTTATTGGACTATTGCTTCATGCT
TTGCATAAATTATTCACACANGTATGGAGANATCCTAATTTTCNATNCACACATNGTATA
AAACTTTCAANTTTTTATGATCAAATGACAGAACTTTTCGGNGATTCANTAGCTTTACGC
CTGCCANCGTTTACAAAACGGGATGAAAATGACAATCATGGAAAATATGCTGGCTTACAA
CTGCAACCTGTATTTGCCAAAGTACCTTTACATGGAAATCATTTCCGTTCATCGCNAAGA
TCTTTNTTATTCCCAANTNCGCAGCTACGAAAGAGAAATATCTCGATATCAGTTAGAAGG
TATCGCAGTAGTCCATCACATCATCGTGTAGAATATACTCACTCTCCGTATTTTTCTTTA
AACTTGAAACTTGCTTACATTGGCAAAAGCCAATCAAAATTCATGAAGCGAGTTGGCAAT
GGGCATATTGATCTGTGTGATGTCATACTGTGA

InterProScan

Gene3D	Histone-fold (IPR009072) - T[1-46] 3.7E-11
SMART	TAF_TATA-bd (IPR004823) - T[1-46] 8.9E-4
Pfam	TAF_TATA-bd (IPR004823) - T[1-45] 3.7E-9
PANTHER	TAF6 (IPR037796) - T[1-365] 2.4E-79
Pfam	TAF6_C (IPR011442) - T[215-303] 8.1E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TAF6L_HUMAN	37.536 %	201	1.49E-57