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TRANSCRIPT CARD

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  1. Clone 'cien196285' > 
  2. Clone 'AHC0AAA233YP02' > 
  3. Clone 'AHC0AAA222YP10' > 
  4. Clone 'AHC0AAA228YF13' > 
  5. Transcript 'Boleac.CG.SB_v3.S141...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S1418.g02718.01.t

Possible name(s)

NLE1; RRP9; WDR55

Gene model

Boleac.CG.SB_v3.S1418.g02718

Location

S1418 [310 / 5,273]

Sequences

Amino acid sequence

Length: 384

>Boleac.CG.SB_v3.S1418.g02718.01.p
MSTGSSDSDNEALSDNEDEKAALRPSNISLDSDISDFAIHPTQNGRISITDMDGYLNLYK
FDVEAPSECLLRKRLSKQPLRCLSYTKDGDGIFVAGKKGSLRLFDVTEEKCSLVLMCSDS
PCYCMCVINKNLLAIGDDDGALKVWDIRKGKTPIMVEERCHDFISCLAIDSNGKYLFATS
GDGTMSTFNIKRRKFMVQSENAEHDMSCVSVVKKNKKVTVGTSEGILLFYNWEQFAAPSD
RFPGHQSPIECIVPINEDIICTGSMDGIIRAVHVLPNRFLGIVGEHPGMSVSKIDVTTDN
KFIASSSHDSLIKFWSIEHLHGTEIDGKAKSVRSLRTKKLVKSGVSGDKISFLSDLGKDV
NVPVVDTSEEEESDSDDDDDAGET

Nucleotide sequence

Length: 2,890

>Boleac.CG.SB_v3.S1418.g02718.01.t
TCTTTCATACATGATAATCATGATTTGTTCCATCTTGATAAGACAACATCTGTCNCTTGT
AAATGTGGTGCCCCTTATAAATGTTCGCTCAGTCTGAGTTTGAGATACCGATAGTTAAAA
GTTGCCTAGAAGTCTTGTGCTCTCTGGATGACATGCTTTGGCACACTCCTGTTCAGGAAT
TGCATGTCCATACAACAACTGCAGATATTGTAAAACATGTTTTATGACTGTGGCTAAATG
TTGTGCTCAACTGTAATTTGTTTTGTGATTTTTGACAAATCCATTTGATTGCTTATCAAC
TCTGAATGGGTCACCTCGTGATCAAGCAACAAATGCAATTATATTGCAAATTAATTTTTG
CAAAATAATCACATCTCACAGACGACAAAACAACAGTTTTTACAATTTGTTCTGGCCGAT
ACTCCACATGCAGTTTTGAGCTTTTCAAATGAATTTACATATATTGTGTCTTTCCATTTT
CATGAATTTGGGCTGTAGTAAAATTTGTTACAATATCTAAGTGCTCATGATATTTATCAA
GCGTCATTTCCACCACTTGTACGGTACGATTACAAGCAATTTACACCGAATGAAAACTCA
TTTCTTTGGCCTTCAGTGGCGATAACCTGTTACGCAGTAGTTGAATGCAGAAATCGTTTG
CTACGTAAAGAGCCATTTACTACATTTTCATAATCAAAATGATTGTTATTGCCTAAAGTT
CCCGTAGCAGCCATGACCTGAAATTTTGTGTCTACCAGTAAGTTCTCATGTTACATCAAC
AAGTCTCTCAGTATCAGTTCATTGTGAAACGTTTTCCATATATGTGCCTCTTTGGCAGTG
TTGTGCCATTTTGAAATACTACCTTATAGGCCTAATTCCATTTCGGGCACAATTTCTACT
AATACGGCTACTGTCTATGGTTTTGCCATAAAAACACAATTTTCCGAACAATCATTTCTG
CATTGTAGAATACGCGTTATATTATAGAGCGGAATAAGCGAAAGGCGTTGATTCTGAGAC
ATTGTGGATCAGTGTTGTCGTTCCATCCTGCCTGTACAATGCTCATGTAATTGTAATCTT
CATTGTCTACTAATCAGTGATTAGGCCTAGCTTTATTTGCTCTGTATGAAGGCAACCATG
TTTGCGCTCCAATACATAATCAGCATTTTCTTGATCAGTTCCCTCCNTAATTATCTGATT
GGATAATGACTCTCTAATTAATATTACCGATATCNCAATGTGATGTTCTCAGGAAACAGG
AACCATTTCTTGATATGTCGAATACTATGCTGACGTCTGTATGGTTGTCATCATTGTTTG
TATGTTTTTGTATGAGATTTCCAGCACCTCTCGTCATATGCTGCCATCATTTGACATTTA
ATGACTCATCCACCACAGTTGTAGCATTTTCTTCAATTGTTGATGTACAGTAGGTTTCAC
AAATCACTTGAGTTGCCAATTATCTGCAGTTGNAATCGTTTCTGGTTTTGTGCTCATATT
TCACCCTTTACACAATTGAAAGGATCTTGGCTTTTTGTTGCAAGACTTATTTTTGCATTG
CCCGCTTACTCAAAATCCTGGCCTTGTGATCTCTGTTCAAGAATGGTGACACATCCTAAG
GCTCCAAAGAGATATTGCGACTAAACTGAGTTGACTCTTGCAACTGGACAATTGTGTCTG
TGTACATTTCATACGTGTGTCTCTTTTCAGATTACTACCATTTACTGCTTACATAATGAG
TACCGGTAGCTCTGATAGTGACAATGAAGCCTTGTCTGATAATGAAGATGAAAAAGCTGC
ATTGCGGCCTTCAAACATCTCGTTAGATTCTGATATATCAGATTTCGCGATACATCCGAC
ACAAAATGGACGGATCTCCATAACAGATATGGACGGATATTTGAATCTATACAAATTTGA
TGTTGAAGCTCCTTCAGAGTGTCTGTTAAGAAAGAGGTTGAGCAAGCAACCTCTTCGTTG
TTTATCTTACACTAAAGATGGTGATGGTATCTTTGTTGCTGGGAAGAAAGGAAGCCTTAG
ATTATTCGATGTCACTGAAGAAAAGTGTTCACTCGTTTTGATGTGTAGTGATAGCCCTTG
CTATTGCATGTGCGTCATTAACAAGAATTTACTTGCAATTGGAGATGATGATGGTGCTTT
AAAGGTTTGGGATATTCGGAAAGGCAAGACGCCAATTATGGTGGAAGAGCGTTGCCATGA
CTTCATAAGTTGCCTGGCGATTGATTCGAATGGAAAATATCTATTTGCCACGAGTGGTGA
TGGAACAATGTCTACCTTTAACATTAAAAGAAGAAAATTCATGGTTCAATCGGAGAACGC
TGAGCATGACATGAGCTGTGTGTCTGTAGTGAAGAAAAATAAGAAAGTGACAGTCGGTAC
TAGCGAAGGCATCTTGTTATTTTACAATTGGGAACAATTCGCCGCTCCTTCAGATAGATT
TCCAGGACATCAATCTCCTATTGAGTGCATTGTACCAATTAATGAAGATATCATTTGTAC
TGGCTCAATGGACGGAATAATAAGGGCAGTCCATGTTCTACCGAACCGTTTTCTTGGAAT
TGTTGGCGAACACCCGGGAATGTCTGTTAGTAAGATCGACGTCACAACTGATAACAAATT
CATAGCAAGCTCATCTCACGATTCTTTGATCAAGTTTTGGAGCATTGAGCATCTTCATGG
TACTGAAATTGATGGAAAAGCAAAATCGGTACGAAGCCTGCGAACAAAAAAACTTGTAAA
GTCTGGAGTTTCTGGCGACAAAATATCATTCTTGTCTGACCTTGGAAAAGATGTCAACGT
CCCAGTTGTTGATACATCTGAAGAAGAGGAAAGTGATAGCGATGACGATGATGATGCTGG
TGAAACATGA

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[29-232] 4.6E-29 - T[233-377] 5.2E-10
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[31-318] 1.25E-45
SMART
WD40_repeat (IPR001680) - T[66-105] 1.2 - T[108-146] 0.0012 - T[150-189] 1.5 - T[235-273] 4.9 - T[276-316] 0.047
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[73-325] 17.113
ProSiteProfiles
WD40_repeat (IPR001680) - T[129-155] 8.804
ProSitePatterns
WD40_repeat_CS (IPR019775) - T[133-147] .
Pfam
WD40_repeat (IPR001680) - T[159-184] 0.084 - T[242-270] 0.23 - T[282-316] 0.09

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WDR55_HUMAN 32.418 % 212 3.32E-65