- Transcript 'Boleac.CG.SB_v3.S146...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S146.g02842.01.t
Possible name(s)
AC011530.1; DMWD; WDR20
Gene model
Location
S146 [47,572 / 57,584]
Amino acid sequence
Length: 700
>Boleac.CG.SB_v3.S146.g02842.01.p
MAASGGGNNMEVKTHFTTREGVYRNHPQAEFCRMNRVPYSPQLGQTTIAPVKGSFVDIED
DEMNLTRVVFVVGKDLFYYDYEGIAQHVDYSHPLDKRVYKGVMPTCHDINKHTATLTNVS
VAVGFGAGQVQIIDVGSRQSLQIFNEERTVEKASATCVQWVPKTENLLMSSHTNGIIYTY
DTSQKNMNVVPVFHDKPKKTCGDISIFTLKTKNYYNQTGVPLGVLKNPLNKWVVTQDNSA
VHEFRFSPDGKTVAIVSQDGYLRLVDFATLEKKGAMKSYFGGLLCCCWSPDGRYIVXGGE
DDLVTVWSFYGSFVLARGYGHRSWVSHVAFDNFLCFVPEEDDVLSWYGXDSPLLIRTNTR
SKXASNHFEXEPTXVXGSKKDLKSPVTKXQDMARRHRTDSTVSRKSNISIAESMDAPPRI
CYRFGSVGQDAQLCLWEITDDVLFPRRRTVSMLRSHGCXHFIRPKTDVQPMTNGTLLQRE
SYHSDSSMVTNSLTQLNSVDGKGKHAKSNGSPSAAKESTPSHSRGFTLFSSKDSHKDRNS
NVTEGKFATLAGGESAEKKEHAKEHKRNLSMPYFGSKNSHKNQTSVNGSVKTEHGKVSKP
PTLGTALCPRLHETAMLDPLVCKTIARSRLTWMSFRKDSFITACQDGCLQIWARPQKLST
QIQQTSPLNELPHRPLNSPTPTPKLSPSKSQXEDESNRQR
Nucleotide sequence
Length: 3,233
>Boleac.CG.SB_v3.S146.g02842.01.t
CCGGACTCGGATTTAGCGAAAAAGACAAAACGCGAACAGGCGGAGCATAATTTACTGAAT
TTGCTCACTGCTCTCCGTCTTAGATCTTAACAGTGGTAGAATAGTACATCGGGTACCGTA
ACTCTTTTGGTACATCAGTACCGGTAACTGGTATAGTTTGCATTGACCTGGCGCATGGTA
TCATGGCTGCAAGTGGTGGAGGAAATAATATGGAAGTCAAAACGCACTTTACTACGAGGG
AAGGGGTGTACAGAAATCATCCACAGGCCGAATTCTGCCGAATGAATAGAGTTCCGTATT
CTCCTCAACTGGGGCAAACAACCATAGCTCCAGTCAAGGGCAGTTTCGTTGATATTGAAG
ATGATGAAATGAATTTGACAAGAGTCGTTTTTGTCGTTGGAAAGGATCTTTTTTATTATG
ATTATGAAGGAATAGCCCAGCATGTTGACTACTCCCATCCTTTGGACAAACGGGTGTACA
AAGGTGTAATGCCAACCTGCCATGACATTAACAAGCATACAGCCACTCTCACAAATGTCA
GTGTGGCTGTGGGTTTTGGTGCAGGCCAAGTTCAAATCATTGATGTGGGAAGTAGACAAA
GCTTACAGATTTTTAATGAAGAGCGAACGGTCGAAAAAGCATCGGCAACATGTGTCCAAT
GGGTTCCAAAGACCGAAAACCTACTCATGTCATCTCATACAAATGGAATTATTTATACAT
ATGACACTTCTCAGAAAAATATGAATGTTGTTCCAGTATTCCATGACAAGCCGAAGAAGA
CATGCGGTGACATTTCAATATTTACCCTGAAAACCAAGAACTATTACAATCAAACTGGAG
TTCCTCTCGGAGTATTGAAAAATCCTCTGAATAAATGGGTTGTAACTCAAGATAATTCTG
CAGTGCATGAGTTCCGCTTTTCTCCAGATGGAAAGACAGTCGCTATCGTATCTCAGGATG
GGTATTTACGGCTGGTGGATTTTGCAACATTAGAGAAGAAGGGTGCAATGAAGAGTTATT
TTGGTGGCTTGTTATGCTGCTGTTGGAGTCCAGATGGTCGTTACATAGTCNCAGGAGGGG
AGGATGATCTTGTCACTGTTTGGTCGTTCTATGGATCTTTTGTCTTAGCTAGGGGTTACG
GACACAGGTCTTGGGTCAGCCATGTCGCCTTTGATAATTTTTTATGCTTTGTGCCTGAGG
AGGACGATGTATTAAGCTGGTATGGTAGNGATTCTCCATTGTTAATTCGTACCAATACCA
GGTCTAAAATNGCTAGCAACCATTTTGAACANGAGCCAACCAANGTACNNGGTAGCAAAA
AAGACTTGAAATCACCTGTCACCAAATTNCAAGATATGGCTAGGCGTCATCGAACTGATA
GCACTGTGTCTAGAAAATCAAATATTAGTATTGCCGAATCGATGGATGCACCTCCTAGAA
TATGTTATAGATTTGGTTCGGTTGGTCAAGATGCGCAACTGTGCCTATGGGAAATAACAG
ACGATGTTCTGTTCCCGAGACGTAGGACTGTATCTATGCTGAGGAGCCATGGCTGCTNGC
ACTTCATCAGACCAAAGACCGATGTTCAACCGATGACAAATGGAACTCTACTGCAAAGAG
AAAGTTATCATTCCGATTCGAGTATGGTGACAAATTCACTAACACAGCTGAACTCTGTGG
ACGGGAAAGGAAAACATGCCAAGTCTAATGGTTCACCATCTGCAGCTAAGGAATCAACTC
CGAGCCATTCGCGTGGATTTACACTCTTTTCTTCAAAGGACTCGCACAAGGATCGCAATT
CAAATGTGACGGAAGGAAAATTTGCGACACTGGCTGGTGGAGAAAGTGCAGAGAAAAAAG
AACATGCTAAGGAACATAAGCGTAACTTGAGTATGCCGTACTTTGGCTCCAAAAATTCTC
ATAAAAATCAAACATCTGTGAATGGGTCTGTGAAAACTGAGCATGGCAAAGTGTCCAAGC
CTCCGACACTTGGGACTGCTCTATGCCCACGTCTACATGAAACNGCGATGCTTGATCCAC
TTGTGTGCAAAACTATTGCTCGGAGTCGCCTCACATGGATGAGTTTTCGAAAAGACAGTT
TTATAACTGCTTGCCAAGATGGATGCTTGCAGATCTGGGCTAGGCCGCAGAAATTATCGA
CTCAAATACAGCAAACCTCTCCACTGAATGAGCTCCCTCATAGACCTTTGAATTCTCCAA
CTCCNACTCCNAAGCTGTCACCTTCTAAGAGTCAANCTGAAGATGAGTCAAATCGACAGC
GGTAATGATTNGCAAGGCATATGTATCGTCAACACTTGTGAGGTGCAATAGATTAATTTT
TCGATAACTTAAAATGTTTACGAGTCCAATCCGTGCGTTTATTCTTGTTACTGCTTGCAA
TTGTTTTCGATTCCCTTCTATTTTCAATACCTATATTAATAACATTCTTGATCTCTAGTA
GGGCCTTTTCAGCGTTGTTAAAGACCTATCACTTCATCAATGATCTTTATATTTTCGTAT
NNAAGTTCTAGCAGCTTCGAATCACTTTGAATCTGTTAGAAATAATTATCACTGATAACA
CTGTCCCATTGTTTTTTGCTGAAGACCTCTATCTCTGTTCTTTGACTAGATGATATTTTA
TGACTATACACCAAGCGTCAAACCTCAGATGCCAATTGATGATATCGGTCGTCCACGTCC
TCACACGATAAAATTGATTGTCATGTAGAAATGGGTGTAGTTTTTATCAAAATAATGAAC
TTTGAGGCTGCAGACAGAGTGAGCAATGAGTACCACCTCCCTCCAATTTCTGGACATTGG
TTATTGGGTTATTAAATGGGTGTTATTGTGCATTCNCGTGATCTATGTGAGATCCCTTGT
CGTCGATTAACTTTATTCACTATGTCTAAAACCTATAAGTGTACCTGTCAGAAGAGAGTT
ACCAGTCGGGTGGATATTGAACCTCGGTACATTGTCAAAAGTCTATATTGNTAGGGCGCT
AAGTAGTTCAATTTTGCATGGAAATGCACAATAACATTCAGTTATAACGACCTGTGGAAG
CGTCATGTACACGNACTTACTTGGGCAGATGGGGGAGTTGGCCGGGGCCTCGAAGTAATA
GGCCCCTTAGTCAAGTGGGGGCAATGCCGTGATTACTGGCTGCTGTACGGAAGGACGAAA
CCATCTGTCTATGTTGACAGTCGCGAAATCTGCCCTTAACCCCGNCCACCAGG
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[120-335] 6.23E-29 |
| SMART |
WD40_repeat (IPR001680) - T[137-181] 6.6 - T[225-266] 0.63 - T[269-308] 0.0021 - T[618-653] 45.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[234-317] 13.527 |
| Pfam |
PD40 (IPR011659) - T[242-260] 0.015 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[276-308] 9.372 |
| Pfam |
WD40_repeat (IPR001680) - T[283-308] 0.02 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR20_HUMAN | 40.419 % | 447 | 8.2E-150 |
| DMWD_HUMAN | 45.185 % | 255 | 2.85E-75 |