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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Clone 'AHC0AAA100YG03' > 
  3. Transcript 'Boleac.CG.SB_v3.S146...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S146.g02848.01.t

Possible name(s)

NPC1; PTCHD3

Gene model

Boleac.CG.SB_v3.S146.g02848

Location

S146 [94,836 / 107,313]

Sequences

Amino acid sequence

Length: 1,183

>Boleac.CG.SB_v3.S146.g02848.01.p
MAEANSANGVGIVPSDRKVGKVSNMTVIFQSKKWKFTAATTFSAMNISALIVTLSLAVTV
VGIGGSSGSETLATYTYSLKHVQHWIVGIAGITFLVNGIALLASMVNNRNFRLVALGLVV
INIILIISLAIWASADGEGRKGFFQYVWDKMDSDTKYLFQSYYSCCGFESIAEWQTTVLP
VDDSCYARLSTTESNITWPDGCYDRITSTYLNAVDIVDGSSTSTFGEPKVNPFYASFVFC
FVLLTIMQTTVLVMFAVSVHSTPSTSHSEVDNNELTIRNLHTISGEDKSMTNGVGVVENG
ANGAAITPDMNREEFTRTDGNATKKKWWTRLADIIARAYADAFYWVGIRVAEHPKMTILF
SIIFVASLSIGMVQRYESPTGSGVGFLSENSQIITETTLRRSVFYITERDQFMLVEADSD
VLSTANFRTVLGIDQSVKSQATSDGATLSTICLQLNGVCKQRSLYELWSFDDAMLNALTN
TDILSKVNENNLVSPVFGDTYDVSHVIGGLQRDSANEITEARAHLLHYVTRTLDQDWEDL
FIKIAQQQYSGINVYGLASNSRRQESSGSFTNDLPLFFVGFVFIFIYILLMTGKFSLIEH
RVYIALLGVAAAGLSMAAGIGLTSCVGLPWTNLHLIVPFLVLGIGVDDMFVLLQAFDAVQ
NDVNCKHLTLQQKAGKALQNAGASITVTSVTDLVAFAVGATSELAGFASFSVFVAVCIII
LFFLECTFFLACVVLDERRKENRYDACLACCYQHDENYKPSKCGQRQILQIVFEDGLGRI
VTNIPFAIFAICTTLAVTGLMAWGFYKLEVRYDPNWYIPSTSYVVEYGNKYDEYYTVGND
ASVYVINADFYNERQKLADLFQSLQSNGNLNPNYGASWFEAYTTWKTSSFDVFGGSSYAD
AAEFYTDVQTFLKNVAGRKYIYDVGFRDGVIIGSKFHIRHRDAANQVENVDIIASIRQNC
EDAGFSNGASVFPFGNLYYIYEITRIIRQEVYRNIGITMLCVFLMVMPMLASVQMGFWVA
LCVAFTTVNVAGTMHFAGLSIETSTIITLLLSIGLAVDYAAHIGHKFLSITGTRKMRARV
AVGQIGLAVFNGGFSTFLALVMLSLSDTYTYKVFFTVFVCVVVYGLWTGXVFLPCVLAII
GPSPHANAEEARLSSRHYEKNGKVKASDSTSSAPSTPTITSRH

Nucleotide sequence

Length: 4,516

>Boleac.CG.SB_v3.S146.g02848.01.t
TCTTTTTGGTATAGCAATGGCGGAAGCAAACTCGGCAAATGGGGTTGGGATTGTGCCTAG
TGATAGAAAAGTAGGAAAAGTCTCAAATATGACCGTCATATTCCAATCCAAGAAATGGAA
ATTCACTGCAGCCACCACATTTTCTGCGATGAACATTTCTGCTTTGATAGTTACGCTTTC
GTTAGCTGTTACTGTCGTTGGAATCGGTGGAAGCTCTGGATCAGAGACTTTGGCAACTTA
TACATACTCCTTGAAGCATGTTCAACATTGGATCGTAGGAATCGCTGGAATAACATTTTT
GGTTAATGGCATTGCATTGTTGGCGTCTATGGTGAATAATCGTAATTTCCGGCTGGTGGC
ACTTGGACTTGTTGTCATAAATATCATCTTGATAATAAGTTTGGCCATTTGGGCTTCTGC
GGATGGAGAAGGGAGGAAAGGCTTTTTCCAATACGTCTGGGACAAAATGGACTCTGACAC
AAAGTACCTATTTCAAAGTTACTATTCCTGTTGTGGATTTGAAAGCATCGCAGAGTGGCA
AACTACTGTGTTACCAGTTGACGACTCATGTTACGCAAGGTTATCGACAACGGAATCAAA
CATTACCTGGCCCGACGGATGCTACGACCGTATCACTAGCACTTACCTCAACGCCGTTGA
TATAGTCGATGGATCAAGCACTTCAACGTTTGGCGAGCCCAAAGTTAATCCCTTTTACGC
TTCATTCGTATTCTGCTTCGTGTTGTTAACTATAATGCAAACGACAGTTCTTGTTATGTT
CGCCGTATCCGTCCATTCCACTCCTAGCACAAGTCACAGTGAAGTGGATAACAACGAACT
AACGATAAGAAATCTCCACACAATCTCGGGTGAGGACAAGTCCATGACGAATGGAGTCGG
GGTTGTGGAAAATGGAGCTAACGGCGCTGCGATCACACCTGATATGAACAGGGAAGAATT
TACGCGAACGGATGGCAATGCTACTAAAAAGAAGTGGTGGACGCGATTAGCAGATATAAT
TGCCCGTGCATATGCCGACGCGTTCTATTGGGTTGGAATACGTGTAGCGGAGCACCCTAA
GATGACTATACTGTTTTCTATTATTTTTGTCGCGAGTCTATCGATTGGGATGGTTCAACG
CTACGAATCCCCTACCGGTTCCGGAGTAGGATTTCTTTCAGAAAACAGCCAAATCATTAC
AGAAACGACGCTTAGACGTTCGGTATTTTACATTACTGAGAGAGATCAATTCATGCTCGT
CGAGGCTGATTCGGACGTCTTGTCTACCGCCAATTTCAGGACAGTACTGGGCATTGATCA
GAGCGTGAAGAGCCAAGCAACCAGTGACGGCGCTACGCTTTCCACAATTTGTCTACAGTT
GAACGGTGTTTGCAAGCAGAGATCTCTCTATGAATTGTGGAGTTTTGACGATGCCATGCT
TAACGCTTTAACGAACACCGACATTTTGTCGAAAGTGAATGAAAACAACCTCGTCAGTCC
CGTATTTGGGGATACATACGATGTTTCTCATGTCATTGGTGGTTTGCAACGAGATTCTGC
AAATGAGATTACAGAAGCTAGAGCGCATTTATTGCATTACGTCACCAGAACGCTTGATCA
AGACTGGGAAGATTTGTTCATAAAAATAGCACAACAACAATATAGTGGGATCAACGTGTA
CGGCTTAGCCAGCAACAGCCGGCGCCAGGAGTCATCAGGCAGCTTCACTAATGATCTTCC
CTTATTTTTCGTGGGCTTCGTATTCATATTCATTTATATTTTATTGATGACTGGAAAGTT
CTCTTTGATAGAACACAGAGTGTACATCGCTTTGTTGGGTGTCGCAGCCGCAGGATTGTC
AATGGCTGCTGGAATCGGTTTAACATCTTGCGTTGGTCTGCCGTGGACGAATCTCCATCT
AATCGTCCCATTTTTGGTACTCGGTATCGGAGTTGACGACATGTTCGTGCTTTTACAAGC
TTTTGACGCAGTACAGAACGATGTAAATTGTAAACATTTAACGCTGCAACAAAAAGCAGG
AAAAGCCCTTCAGAACGCTGGAGCGTCCATCACTGTGACGTCAGTAACAGATCTGGTGGC
ATTTGCGGTCGGCGCGACGAGCGAGCTCGCGGGATTTGCATCCTTCAGTGTGTTTGTAGC
GGTTTGCATCATTATTTTGTTTTTTCTTGAGTGCACTTTCTTCCTTGCATGCGTCGTTCT
GGACGAGCGAAGAAAAGAGAATAGGTACGATGCCTGCTTGGCATGTTGCTACCAACACGA
TGAGAATTACAAGCCGTCAAAATGTGGGCAGCGGCAGATCTTGCAAATTGTTTTTGAAGA
TGGTTTAGGACGAATCGTGACAAATATTCCATTTGCAATATTCGCCATATGCACAACTCT
AGCCGTTACAGGATTGATGGCGTGGGGATTTTACAAGCTAGAAGTACGATATGATCCCAA
TTGGTACATCCCGTCGACGAGCTACGTAGTTGAATACGGGAATAAATATGACGAGTACTA
CACTGTCGGGAACGATGCGAGCGTTTACGTGATAAACGCTGACTTTTACAATGAACGGCA
GAAGCTTGCAGATCTATTTCAAAGTCTCCAAAGCAATGGAAATCTGAATCCTAATTACGG
CGCAAGCTGGTTTGAAGCATATACAACTTGGAAAACGTCGTCATTTGACGTATTTGGCGG
TAGTTCGTATGCAGACGCTGCTGAGTTTTACACTGATGTGCAAACGTTCTTAAAGAACGT
GGCTGGAAGAAAGTACATCTATGATGTGGGATTTCGAGACGGCGTCATAATCGGGTCAAA
ATTCCACATCCGTCATCGGGACGCAGCAAATCAAGTCGAGAATGTTGATATAATTGCTAG
CATCCGACAAAACTGTGAAGACGCCGGCTTCAGCAATGGTGCAAGCGTTTTCCCGTTTGG
AAACTTGTATTACATTTACGAGATAACCAGGATAATCAGACAAGAAGTATACCGAAACAT
TGGTATTACGATGCTTTGCGTCTTTTTGATGGTTATGCCAATGTTAGCAAGCGTGCAAAT
GGGATTTTGGGTGGCACTCTGCGTTGCATTCACAACAGTGAACGTTGCTGGCACCATGCA
TTTCGCCGGACTTTCTATCGAGACAAGCACGATTATAACGTTGCTGTTATCGATCGGTTT
GGCGGTGGATTATGCTGCACACATAGGTCATAAGTTTCTGTCTATCACGGGAACAAGAAA
AATGCGTGCCAGAGTAGCAGTGGGGCAAATAGGATTGGCTGTCTTCAACGGTGGATTTAG
CACTTTTCTAGCCTTGGTAATGCTGTCGTTGTCTGATACGTACACATACAAAGTATTCTT
CACGGTTTTTGTTTGTGTTGTTGTGTACGGTCTTTGGACTGGCNTGGTTTTCCTGCCGTG
TGTCCTGGCGATTATCGGGCCTTCACCGCATGCGAACGCTGAGGAAGCTCGTTTATCCAG
TAGACACTACGAAAAGAACGGAAAAGTGAAAGCAAGCGATTCCACAAGTTCCGCACCGTC
GACCCCAACCATAACATCGAGACATTGATGTAGGCATAACGGCAAAAACTCTTTACCTGT
AGCATATGTTACGTAATATCCAGCTAGTGCGCGTTGCTGGACTATTCATTGATTTNCTAG
TTCACGACCAGAAATCCTATAAGACGAAATTCGGGCAATTANGTCNAATAGCCTGCCACC
AGCTCACATGNGCAATTTGTGATGTGAACAGGCCGACCTCAGGTTTGCTGATTCCTGACC
CGAGTATTTATGTTATNTTCGGCAGCGTCACGTCGGCAGGCCACTACATAAAGAACGAAA
TGAAAGCCACCAATAATAGCTATCTACCTNTTTTGGGCTGTTGCATATTCACCTCTGACC
CTCGTTAGGCCTATGGCTGGATTAGTCCGCTTTGTTAGGGAGCATTATCACTTCTTTTAC
CATTGCCGTCACCTAGGGGTTGCAATAATGTAACAACGTCTGTAGGTTTGGAATCGGGCG
CAACCCCAATCTCGTTATATNGCCTTGACGGCCGAAGACGCAATTTCTTGAGCACATTTG
ACACTTGTCAGAGTTTGAGTTACATAGCCGTTGCACAGAGTGTGTGCACTTGTTTGCCTA
GCACTCATTTTGTAAGAAGGGCCTATAGGCCTACTCTTCTGTTCTGTCCTCTCGTCAGTA
TTATTTGATGCACAAGGTTTATTTTGCACTTCTTTTGTTTTGTAGCGTCTTGGGTCTGTT
ATATACTGTTTAACGAGTTCACTTATATAAACAAACTGCGTTTTTCATATTTTTACAGTT
GGATATTGCGATCGTAGGTCATGAATTTGTTCGGCACTGACCTCTTACATTGCTGTCTTA
TTACTTTGAAAAAAGGTTTATATTAGAGATACATAAACATTTAAATAGGCCTGAACCTAT
TAGGCCTTCGTTCTCCAAATAATGTGGGAAATAACATTTTGAGAAGTGTGAGAGTTGTAT
TTCGAATAAAAATTAC

InterProScan

SUPERFAMILY
Tetraspanin_EC2_sf (IPR008952) - T[144-208] 6.41E-6
Pfam
Ptc/Disp (IPR003392) - T[418-1140] 2.2E-83
ProSiteProfiles
SSD (IPR000731) - T[573-735] 31.755

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NPC1_HUMAN 24.473 % 178 2.69E-45
NPCL1_HUMAN 25.382 % 98.2 1.42E-20
PTHD3_HUMAN 21.488 % 103 2.37E-22