- Transcript 'KH2012:KH.C8.506.v1....' >
- Transcript 'Boleac.CG.SB_v3.S147...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S147.g02878.01.t
Possible name(s)
GATA3; GATA4; GATA6
Gene model
Location
S147 [63,825 / 73,620]
Amino acid sequence
Length: 721
>Boleac.CG.SB_v3.S147.g02878.01.p
MTPWHWSWSPPIRSEFTKEGEFEDYFATKNFFSALSVRLESQEGLDQSLYSQRSGGGTGS
PTSPGSCDNLSDNHESPSMTSSSRLPRGLLMSHYSPSTVDRESSCNQHYGASSGRYSEES
ASAEVVQGFPNSEPPESTGTSPITDSGVEEDRGPDVTCNTRTRIGSGIASNVCFIQCCEM
KCTYLLPRGLLMSHYSPSTVDRESSCNQHYGASSGRYSEESASAEVVQGFPNSEPPESTG
TSPITDSGVEEDRGPDVTCNTRTRIGSGIASNGNAEQIPPYEINSASGANAVSMSYQSSR
FSPMASVSSTPISEDAIYSYNSEMARRVGNSHSTLTHSSAXARXNPYHNFYASGYPVSSS
LPGRGATHPTTPLNPYQLSIPSYPGTQSAVSNGILHSHDHPEVTNLAHTGTYPGSASEGW
NGHPSHGYTGIEYSRLPMTLPGSIAYPXQDGRHCANCGASTSSFFYDWRHDGTYQYVCSS
CAPYRGVGPMRMSQKPRGKLNACRRQVCSNCKTTVTTLWRRSPDGSPVCNACGLYQKLHR
TPRPATMKKDSIQTRKRKPKGQGKNKKVSRRQTVSTESHQSEGYSAATPTATTESPPSAS
ESIRHSNTETTSGNSSSVSYFESHSSSLRYQRDSTQHSTDAGTGLTESSATTSSGVDHNM
TDVSNRSPRCQQSACAIDNIASNQTNEMKPMVSAITHSSVADSFSPTAGYTSSAHNGSYD
S
Nucleotide sequence
Length: 2,163
>Boleac.CG.SB_v3.S147.g02878.01.t
ATGACGCCATGGCATTGGTCTTGGTCTCCTCCCATTAGGTCTGAATTTACGAAAGAAGGA
GAATTCGAAGACTATTTTGCTACCAAAAATTTCTTTAGTGCATTATCTGTACGGTTAGAA
AGTCAAGAAGGATTGGATCAAAGTTTGTATTCACAGCGATCTGGTGGAGGAACGGGGTCT
CCAACATCTCCAGGAAGTTGCGACAATTTAAGTGATAACCACGAATCTCCATCAATGACT
TCATCGAGCAGACTTCCTCGCGGCTTGCTGATGTCTCACTACAGTCCATCTACGGTTGAC
AGAGAGTCATCGTGCAATCAACATTACGGAGCATCATCGGGTCGTTATTCTGAGGAATCG
GCCTCCGCAGAAGTGGTACAGGGATTCCCGAATTCTGAGCCACCAGAATCTACTGGTACA
AGCCCTATTACAGACTCGGGCGTGGAAGAAGACAGAGGACCGGATGTTACTTGCAATACT
CGAACTAGAATCGGTAGTGGAATCGCAAGCAATGTTTGCTTTATTCAATGCTGCGAAATG
AAATGTACCTATCTACTTCCTCGCGGCTTGCTGATGTCTCACTACAGTCCATCTACGGTT
GACAGAGAGTCATCGTGCAATCAACATTACGGAGCATCATCGGGTCGTTATTCTGAGGAA
TCGGCCTCCGCAGAAGTGGTACAGGGATTCCCGAATTCTGAGCCACCAGAATCTACTGGT
ACAAGCCCTATTACAGACTCGGGCGTGGAAGAAGACAGAGGACCGGATGTTACTTGCAAT
ACTCGAACTAGAATCGGTAGTGGAATCGCAAGCAATGGCAATGCCGAGCAAATACCACCA
TACGAGATCAATTCGGCAAGCGGTGCAAATGCAGTTTCCATGTCATATCAGTCGTCAAGA
TTCTCTCCGATGGCGAGCGTTTCATCGACACCAATTTCTGAAGATGCTATTTATTCCTAC
AATTCNGAAATGGCCAGACGTGTGGGAAATAGTCACTCTACATTAACACATTCNTCCGCC
CANGCTCGAGANAACCCGTACCATAATTTCTACGCATCTGGATACCCTGTTTCATCCTCT
TTACCCGGACGCGGAGCAACTCACCCCACAACTCCATTAAATCCTTACCAACTCTCGATA
CCATCTTATCCCGGAACTCAGTCGGCTGTTTCCAACGGCATTTTACACTCGCACGATCAT
CCGGAAGTCACAAATTTAGCCCACACTGGAACATACCCAGGATCGGCATCTGAAGGATGG
AACGGACACCCAAGTCATGGCTACACGGGCATCGAATACTCAAGACTTCCGATGACCCTA
CCAGGATCGATTGCTTATCCTTANCAAGATGGGCGACATTGTGCAAATTGTGGAGCAAGT
ACTTCTTCCTTTTTCTATGACTGGCGACATGATGGTACTTATCAATATGTATGCAGCTCT
TGCGCGCCATACCGGGGGGTAGGACCAATGCGTATGTCTCAAAAACCAAGAGGAAAACTG
AATGCTTGCCGTCGCCAAGTATGCAGTAATTGTAAAACGACAGTGACGACGCTGTGGCGA
AGAAGTCCCGATGGCAGCCCAGTTTGTAACGCTTGCGGCCTTTATCAAAAACTACACAGA
ACTCCCAGACCTGCAACGATGAAAAAAGACAGCATACAAACCAGAAAAAGAAAGCCAAAA
GGACAAGGAAAAAACAAAAAAGTNTCAAGACGNCAAACAGTATCCACGGAGTCACATCAA
TCGGAGGGGTATTCCGCTGCAACGCCTACGGCCACAACCGAATCCCCTCCATCTGCGTCC
GAGTCAATCCGCCACAGTAACACAGAGACCACAAGCGGAAATTCGTCAAGCGTATCGTAT
TTTGAAAGTCACAGTAGCAGTCTTAGATATCAACGTGACTCTACTCAACATAGTACCGAT
GCCGGTACTGGACTTACCGAGTCGTCAGCTACTACATCTTCTGGAGTAGATCACAATATG
ACTGACGTATCAAACAGATCTCCACGATGTCAACAGTCTGCTTGTGCGATTGATAACATC
GCTTCCAATCAAACGAATGAGATGAAGCCAATGGTTTCTGCGATCACGCACTCATCTGTA
GCGGACAGTTTCAGTCCAACCGCTGGATACACATCTTCAGCTCATAATGGATCATACGAT
TCA
| ProSiteProfiles |
Znf_GATA (IPR000679) - T[448-484] 10.079 - T[508-555] 25.348 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[499-558] 2.1E-25 |
| SMART |
Znf_GATA (IPR000679) - T[502-552] 5.4E-22 |
| PRINTS |
Znf_GATA (IPR000679) - T[504-521] 7.7E-8 - T[522-539] 7.7E-8 |
| Pfam |
Znf_GATA (IPR000679) - T[508-541] 1.3E-14 |
| ProSitePatterns |
Znf_GATA (IPR000679) - T[508-532] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GATA6_HUMAN | 39.336 % | 124 | 8.32E-30 |
| GATA4_HUMAN | 53.333 % | 132 | 3.76E-33 |
| GATA3_HUMAN | 53.636 % | 121 | 2.72E-29 |