- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C1.1144.v1...' >
- Transcript 'Moocul.CG.ELv1_2.S85...' >
- Transcript 'KH2012:KH.C4.420.v1....' >
- Transcript 'Boleac.CG.SB_v3.S148...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S148.g02925.01.t
Possible name(s)
AL136295.5; RNF217; RNF31
Gene model
Location
S148 [179,416 / 183,256]
Amino acid sequence
Length: 1,183
>Boleac.CG.SB_v3.S148.g02925.01.p
MSIAQYKSVRRTLEQKVRHSQAKKDLVQQLVENMLAYDVPIAARYDFVDVIRILQENCLP
FDPGLEALIRGLGILEKYGKNLLRHERPPLWRVVRLSNTIFKEEVDVIKGAREILGQLGY
TKLVDDGLSYPDDLLIPDIPVVTSVTTDILLLRMELIMLAHGEHRQENAFYSYIPTIEIK
MVQEKMGVADIPNEQDIQATFPLPMPPSYQQVLGGAGINVQHMQNASETRVVENGNSRPV
SSQIDETADNEIDIDELCDLCGQKKPDIKCNYCNGQEFCFDCNELWHNNPKRKSHKAHLI
FLAEAATNSSTQKTNGVLGTNEIHALQEPSSRLLDSVHTVEIGSSNSESEFTMRMNRKAI
ELMEISDPMRKHQRLMECLNQIDNEAARYRKFIETLPQQANDKPHLAKHIHSKIEELQAL
KEHLKGICGVDIFPPEPNPPRPLNIEQNETALFHSAEFHNMPSNSLPAAHHSMPVAEATL
IDLEPLAEPCQNYDELQPQHNTSNAQLLSTMLSSNDFEVLQKHDTGDNEVQTYQPITEVH
NNEEPGIELKFQPIPKTRRSKPLDSESQFHQPSPREHRNGEPDKELQFHQPDTKALKIGE
PQSHAPHVSSQLGSLNIEDNVPLGFEMNAPSGENEFGIGTEIPFTTMESQMKDFLVGPTS
LFLTNLSPTELQKKIKKEEHRYQTTQFLDSIRAGDAASFRPEQVEVAIHEIDKESSSAQM
TPNTWLQQNWVPEVQSFIALAKTNGFKISPENAEDVLLEADDVFEKGLELITTTQDEQIY
GMAEQFGFDAAKRAFIKHKRDRYLALASLQKTTVTQIFLEFQEYDKDNDQVSELKMALQI
NDEIHLTICVNDKNIRDIVCPVCSKPEFGSDEETKSNFINHVDVILRNMPNTRVHEIFQQ
KLRDFTLMRLPNFRWCSHCSGGFQFDAINDNIKMLCPFCRKHTCYKCKKQWEPQHDGITC
EQFQKWKEANDPEFQAAGLARHLRENGIDCPDCKFRYALAKGGCMHFKCTQCSHEFCSGC
SQAFKHGRQCGKLPSCVNRGLHAHHPRDCLFFLRDAEPASLVKLLKDSGIQVDRKDSQQK
TCEVMEQKDTPTGLKDAPCDRAVEPGCAGLCKLHYMEYLVNLVNSHGLDPADILTTDQLK
ACLLREDIHVPNRPPRESDAAYRNRLLTEVKKLPLTRRTSDSA
Nucleotide sequence
Length: 3,552
>Boleac.CG.SB_v3.S148.g02925.01.t
ATGAGTATAGCACAGTATAAAAGTGTTCGAAGAACTCTGGAACAAAAAGTGCGGCACAGC
CAAGCCAAAAAAGATTTGGTCCAGCAACTTGTTGAAAATATGCTAGCATATGATGTTCCA
ATTGCCGCTAGGTACGACTTTGTGGATGTTATACGAATTCTACAAGAAAATTGCCTGCCG
TTCGACCCAGGTCTGGAAGCATTGATCCGCGGCCTAGGCATTCTTGAAAAATATGGCAAG
AATCTTCTACGACATGAGAGACCTCCTCTTTGGCGTGTTGTCAGACTTTCCAACACTATT
TTTAAAGAAGAAGTCGATGTAATCAAAGGAGCTCGAGAGATATTGGGTCAACTTGGTTAC
ACAAAACTGGTAGATGATGGATTATCATATCCAGATGATCTTCTAATCCCTGATATCCCT
GTTGTTACGTCAGTGACAACAGACATTCTCTTGTTAAGAATGGAATTGATAATGCTGGCT
CATGGTGAACACCGTCAAGAAAATGCGTTTTATTCATATATTCCTACGATTGAAATAAAA
ATGGTTCAGGAAAAGATGGGGGTTGCTGATATTCCAAATGAACAAGATATCCAAGCTACT
TTTCCATTACCCATGCCTCCAAGTTATCAACAAGTCCTTGGTGGGGCAGGTATTAATGTC
CAGCATATGCAAAATGCTTCTGAAACAAGAGTGGTTGAAAATGGAAACAGTCGCCCAGTT
TCAAGCCAAATTGATGAAACTGCTGATAATGAAATTGACATTGACGAACTATGTGATTTA
TGCGGGCAAAAGAAACCTGATATTAAATGCAATTATTGTAATGGACAAGAGTTTTGTTTT
GACTGTAATGAACTCTGGCATAACAATCCAAAACGAAAAAGTCACAAAGCACATTTGATA
TTTCTTGCAGAGGCTGCAACAAATTCATCAACACAAAAGACAAATGGTGTATTAGGCACG
AATGAAATTCACGCACTGCAAGAGCCTAGCTCTCGCCTTCTAGATTCAGTCCATACTGTT
GAAATTGGTTCCTCAAATAGCGAAAGTGAATTTACAATGCGAATGAATCGCAAAGCTATT
GAACTGATGGAAATATCTGATCCAATGCGCAAGCATCAAAGACTCATGGAATGCTTGAAT
CAAATTGACAATGAAGCAGCTAGATATAGAAAATTTATTGAGACTCTTCCGCAGCAGGCG
AATGACAAGCCTCACCTTGCCAAGCATATCCATAGCAAAATAGAAGAGTTACAGGCACTC
AAGGAACATTTGAAAGGCATTTGTGGTGTTGATATTTTTCCACCTGAACCGAATCCACCA
AGACCTCTAAACATCGAACAAAACGAGACCGCATTGTTCCATTCTGCTGAATTTCATAAC
ATGCCTTCTAACAGCCTTCCAGCAGCACATCATAGCATGCCTGTGGCGGAAGCAACTTTG
ATAGATTTAGAACCACTGGCAGAACCATGTCAAAATTATGATGAGTTGCAACCCCAACAT
AACACCAGTAATGCACAGTTACTTTCTACTATGCTTTCAAGTAATGATTTTGAAGTGCTC
CAAAAACACGACACGGGAGATAATGAGGTACAAACTTATCAGCCTATCACAGAGGTGCAC
AACAATGAAGAACCAGGCATTGAATTAAAATTTCAGCCTATCCCAAAGACACGCAGAAGT
AAACCCCTGGACAGTGAATCGCAATTTCATCAACCTTCCCCCAGGGAGCACAGGAATGGA
GAACCGGACAAAGAATTACAATTTCATCAACCTGATACGAAGGCGCTCAAAATTGGAGAA
CCACAATCACATGCACCTCATGTTTCAAGCCAGCTGGGAAGTCTGAACATTGAAGATAAT
GTACCACTGGGTTTTGAAATGAATGCTCCATCTGGAGAAAATGAATTCGGCATTGGGACC
GAGATTCCTTTCACAACAATGGAGAGTCAAATGAAAGATTTTCTTGTCGGACCGACTTCA
CTATTTTTGACCAATTTGTCCCCAACTGAGTTACAGAAGAAAATCAAGAAAGAAGAGCAC
AGATATCAAACTACACAATTTTTGGACTCTATCAGAGCTGGTGATGCCGCATCGTTTCGT
CCTGAACAAGTTGAAGTTGCAATTCATGAAATCGACAAAGAATCGAGCTCAGCTCAAATG
ACACCTAATACATGGCTACAACAAAATTGGGTTCCTGAAGTTCAAAGCTTCATTGCTCTT
GCTAAAACAAATGGATTTAAGATCTCGCCTGAAAATGCGGAAGATGTGTTACTAGAAGCA
GACGACGTGTTTGAAAAGGGTCTTGAATTGATAACCACGACTCAAGATGAACAAATTTAT
GGAATGGCCGAACAGTTTGGATTTGATGCAGCTAAACGGGCATTCATAAAACATAAAAGA
GACAGATATCTTGCATTAGCATCATTACAAAAAACTACCGTCACTCAGATCTTCCTAGAA
TTTCAAGAGTATGATAAAGACAATGACCAGGTCTCAGAACTGAAGATGGCCTTACAGATC
AATGATGAAATACATTTGACAATCTGTGTGAATGATAAGAATATTAGAGATATCGTCTGC
CCGGTATGTTCCAAACCCGAATTCGGTAGCGATGAAGAAACAAAGTCGAATTTTATCAAT
CACGTAGACGTCATTTTGCGCAATATGCCAAACACAAGAGTGCATGAAATTTTCCAGCAA
AAACTTAGAGACTTTACCCTGATGCGGTTACCGAATTTCCGATGGTGTTCTCACTGCAGT
GGAGGCTTTCAATTTGATGCAATTAATGATAATATTAAAATGTTATGCCCGTTTTGCCGT
AAGCATACTTGCTACAAATGCAAAAAGCAATGGGAACCTCAACATGATGGAATTACGTGT
GAGCAATTTCAAAAATGGAAGGAAGCAAACGACCCCGAATTCCAAGCTGCTGGATTGGCT
AGACATTTACGAGAAAACGGCATTGATTGTCCGGATTGCAAATTTCGATACGCATTAGCT
AAGGGTGGATGTATGCATTTCAAATGCACACAATGTTCTCACGAATTTTGCAGTGGCTGC
AGCCAAGCTTTCAAACATGGCAGACAATGTGGCAAGTTGCCGTCATGTGTTAACAGAGGG
TTACATGCCCACCATCCACGAGACTGCTTATTTTTTCTCAGAGACGCTGAACCAGCGTCA
CTAGTCAAGTTATTAAAAGACAGTGGTATTCAAGTCGATCGGAAAGATTCGCAACAGAAA
ACATGCGAAGTCATGGAGCAGAAGGATACTCCTACCGGACTTAAAGATGCGCCTTGCGAC
CGAGCAGTTGAACCAGGCTGTGCTGGGTTGTGCAAGTTGCATTATATGGAATATCTCGTT
AATCTTGTCAATAGCCATGGTCTAGATCCGGCAGATATTTTAACGACTGATCAGCTAAAG
GCTTGTTTGCTTCGTGAAGATATCCATGTCCCGAATAGACCTCCTAGAGAGTCTGATGCG
GCGTATCGTAATAGACTGCTAACTGAAGTGAAAAAGTTACCTTTGACACGCCGGACATCT
GATAGTGCATGA
| SUPERFAMILY |
PUB-like_dom_sf (IPR036339) - T[62-137] 7.59E-10 |
| Pfam |
PUB_domain (IPR018997) - T[66-133] 6.8E-12 |
| PANTHER |
RNF31 (IPR026254) - T[669-814] 8.8E-203 - T[845-1175] 8.8E-203 |
| Pfam |
RNF31-UBA (IPR032065) - T[683-814] 3.1E-6 |
| SMART |
IBR_dom (IPR002867) - T[896-960] 4.1E-6 - T[972-1049] 0.46 |
| Pfam |
IBR_dom (IPR002867) - T[898-960] 1.2E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF31_HUMAN | 45.294 % | 307 | 6.86E-88 |