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  1. Transcript 'Boleac.CG.SB_v3.S14....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S14.g02619.01.t

Possible name(s)

CNIH1; CNIH2; CNIH3

Location

S14 [486,207 / 493,763]

Sequences

Amino acid sequence

Length: 1,008

>Boleac.CG.SB_v3.S14.g02619.01.p
MDLCLRKILLWREKKSTPKTKMAFTFAAFCYILAIVLTAFLIFFAIWQIIAIDELKTDYK
NPIDQCNSLNPLVLPEYGIHIFYNILFLWSGELLTVALNVPLMAYHIYRYAHRPIMSGPG
LYDPTTVMNANILSYCMKEGWGKLAFYIISFFYYLYRKVVAMISVDYEETHVLVVVVISL
SWMNSVFHPSRKNPFLNPQLPQSHYAPSPSKEILDKSVTLTPQKLKHRHEYSLPPEVYTP
EQYSILEENSPFNKPPLPTHENNDAVLNLQQILSDVETWDSVKFCEKWSSKIFEVKEDTS
ARKVFDKPHGPLSSTIKSETSKLSVRTMKDKPTRIQTSFASDQNLSADYNRTSNIQQRLD
RFRFGAPKAPEKRKAGKSKQSTSSGVSINHLRSLNKSQSSSPKRSSKVMSQSPMKENSLR
IRNHAKISISETNKTSVQDQDTVPKPPLPPPTLETTNVIDTSLSSLNSRLDRLIQQSSSV
ALSPLSTCKSTLDRSSASILKVSSDSTTLSSDFASIQEAPESCDCEAPHVSSPLLKQSAA
THKENDILYQWRLKRKLEEAREHIESNQGLFYNGERLPSKAERPFSAEASRVLQDSTSVS
GIRSNPITPKKQNRTLSQPASQYFPPLGHHFYGMEPMKFYQSSCGCPCVHQLPHVTGPEQ
APEKQDAAVRVTEKVSIETQTGRSLVFSGDACSNNPISEQGGLSDENQAKPTCAPVNTFA
HTSTPSSTVSFHRVKIIEAEAENSPQPAKGSSQAQNLSPLSHKTDVTTLWSSTDHKRMEG
SQSPVSSVPSSHQRLGSDTEPCSPTADVVKEVVGSHLFNTTRSSSTTSAVSRLKDRKKSH
DQKSKRRLQKDDSLNGSYTESSSSDKKKVPKSDNRSPNPVENNQGSETHAKSPISEHCSS
HDDSINQAGRNVSKTPLISPMKPLSPVEELHCTGEADETESDNSMEDDDKFDFDPAEFFD
KILEDVMGDQFGLTDXKILKELQTQKNHILEEFRQIADEIENCXTSDL

Nucleotide sequence

Length: 3,247

>Boleac.CG.SB_v3.S14.g02619.01.t
ATGGATCTCTGTCTGAGAAAGATCCTTTTATGGAGAGAGAAAAAATCTACCCCAAAGACG
AAGATGGCATTTACGTTTGCTGCATTTTGTTACATCCTCGCCATTGTCCTAACTGCCTTT
TTGATATTCTTCGCAATCTGGCAGATCATTGCCATTGATGAATTGAAAACAGACTACAAG
AATCCGATCGATCAATGTAACAGTTTGAATCCACTTGTCCTCCCAGAATACGGCATCCAC
ATTTTTTACAACATTCTTTTCTTGTGGAGTGGGGAATTGCTCACTGTTGCGCTGAATGTT
CCGCTTATGGCGTATCACATTTACCGATACGCTCACCGCCCAATTATGTCTGGGCCTGGA
CTTTATGATCCAACCACTGTAATGAATGCCAATATATTGTCTTACTGCATGAAAGAAGGT
TGGGGAAAACTTGCATTCTATATAATCTCATTCTTTTATTATCTTTATCGTAAAGTCGTT
GCGATGATTTCTGTTGACTATGAGGAAACACATGTTTTAGTTGTGGTGGTGATTAGCCTT
TCCTGGATGAATTCTGTATTCCATCCATCAAGAAAGAACCCATTTCTAAATCCACAACTG
CCACAATCTCATTATGCACCTTCCCCAAGTAAAGAAATCTTAGACAAAAGTGTGACATTA
ACGCCGCAGAAGTTGAAACACCGACACGAATATTCTTTGCCTCCTGAAGTGTATACACCT
GAGCAATACTCGATCCTTGAGGAGAATTCCCCATTTAACAAGCCGCCCTTACCAACGCAT
GAAAACAATGATGCTGTCTTGAATCTTCAGCAAATTTTGAGTGATGTTGAAACATGGGAT
TCTGTGAAATTTTGTGAGAAGTGGTCTTCAAAGATTTTTGAAGTGAAAGAAGATACTTCG
GCACGCAAAGTATTTGACAAGCCTCACGGACCACTATCATCTACAATTAAGAGTGAAACT
TCGAAACTGTCAGTGAGAACCATGAAGGATAAACCAACCCGCATCCAAACCTCTTTTGCT
TCAGACCAAAACTTGTCAGCAGATTACAATAGGACATCCAATATTCAACAGAGACTTGAT
AGATTTCGTTTTGGTGCACCAAAAGCACCGGAGAAAAGGAAAGCGGGAAAGTCAAAACAG
TCTACTTCAAGTGGGGTGTCAATCAATCATTTACGATCTCTAAATAAATCGCAAAGTAGT
TCACCTAAGCGAAGCAGCAAAGTTATGTCACAGAGTCCAATGAAAGAGAATTCGTTGAGG
ATTCGAAATCATGCAAAGATCTCAATTTCAGAAACCAACAAGACATCTGTGCAAGATCAG
GATACTGTGCCTAAGCCTCCATTACCTCCCCCTACATTGGAAACTACAAATGTTATTGAC
ACCAGTCTTTCATCACTGAATTCTAGACTGGATAGATTAATCCAACAGAGTTCTTCTGTT
GCATTGTCACCCCTCTCCACTTGCAAATCTACACTAGATCGATCGTCGGCTTCAATATTG
AAGGTGTCCTCCGATTCCACCACCTTGTCTTCAGATTTTGCGTCTATTCAAGAAGCACCT
GAATCGTGTGACTGTGAGGCTCCTCATGTTTCCTCACCGCTTTTAAAACAAAGTGCTGCT
ACGCACAAGGAAAATGATATTTTGTACCAATGGAGATTGAAGAGGAAACTGGAAGAAGCC
AGAGAACATATCGAATCCAATCAAGGCCTTTTTTACAACGGGGAAAGGCTACCGAGTAAA
GCTGAGAGGCCATTTTCTGCTGAAGCATCAAGGGTGTTACAAGATTCAACAAGTGTCAGT
GGAATACGTAGCAATCCAATTACCCCAAAGAAACAAAACAGAACTCTATCTCAACCTGCA
AGCCAATATTTTCCACCTTTAGGTCATCATTTTTATGGCATGGAACCGATGAAGTTTTAT
CAGTCTTCTTGTGGATGTCCATGTGTACATCAGCTACCTCATGTCACTGGGCCCGAACAA
GCACCAGAGAAACAGGACGCTGCTGTTAGAGTAACCGAAAAGGTGTCGATTGAAACTCAA
ACAGGGCGGAGTTTGGTTTTTTCAGGTGATGCATGTAGCAACAATCCTATTTCAGAACAA
GGTGGTCTCTCTGATGAAAACCAGGCAAAGCCAACATGTGCACCGGTAAATACTTTTGCA
CATACCAGCACACCCTCATCAACTGTATCGTTCCATAGAGTAAAAATTATTGAAGCAGAG
GCAGAAAATTCACCGCAACCAGCAAAAGGTTCTTCTCAGGCACAAAACTTGTCCCCTTTG
AGCCACAAAACTGACGTTACCACCTTGTGGAGTAGTACAGACCATAAGAGAATGGAAGGA
AGTCAATCCCCAGTTTCAAGTGTACCTTCATCACATCAAAGACTTGGCAGTGACACAGAA
CCTTGCTCTCCAACTGCTGATGTTGTAAAAGAGGTAGTTGGTTCACATCTTTTCAACACG
ACTCGTTCGTCTTCAACGACTAGTGCTGTATCTCGATTAAAAGACAGGAAGAAGTCTCAT
GATCAGAAAAGCAAACGTAGGTTGCAGAAAGATGACTCTTTGAATGGATCATACACAGAA
TCCAGTAGCTCGGATAAAAAGAAAGTCCCCAAGTCAGATAACAGAAGCCCAAATCCAGTG
GAGAATAACCAAGGTTCTGAAACCCATGCCAAATCGCCAATCTCTGAGCACTGCTCAAGT
CATGACGACTCTATTAATCAAGCAGGACGGAATGTCAGTAAAACNCCTCTGATTAGCCCG
ATGAAGCCTCTTTCTCCGGTTGAAGAACTTCACTGTACTGGAGAAGCTGATGAAACTGAG
TCAGATAATAGCATGGAAGACGATGATAAATTTGATTTTGATCCTGCAGAGTTCTTTGAC
AAGATCTTGGAAGATGTGATGGGCGATCAATTTGGATTGACTGACAANAAGATTTTAAAG
GAGTTGCAAACACAGAAGAATCATATTTTGGAAGAATTTAGACAAATTGCTGATGAAATT
GAAAATTGTGANACTTCCGACCTCTAGTCTGCAATCATGTCACAATTGCCTGACGTGCCT
TGGATTTTGCAATGAAAAATTTTGCTGCTGTCTTTGTAGAATTCCTCTATGTAGTTTGTA
GGCCTATANACTCTGTCTTGAACAATATTTTTATACAATGAGAATATATTTTGATAGCTC
TGGGATGTGTTGTGTCTTGCGTGTGTAATTTGTCATATGAAAATCGTCAATTGCCGGTAT
ACTTGCT

InterProScan

SMART
Cornichon (IPR003377) - T[28-156] 6.4E-67
Pfam
Cornichon (IPR003377) - T[28-156] 1.3E-43
ProSitePatterns
Cornichon_conserved (IPR033466) - T[50-64] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNIH1_HUMAN 72.028 % 230 1.54E-70
CNIH3_HUMAN 56.604 % 189 9.73E-56
CNIH2_HUMAN 52.83 % 185 4.8E-54





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