Aniseed - Transcript Card

Transcript 'Harore.CG.MTP2014.S1...' >
Transcript 'Boleac.CG.SB_v3.S153...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S153.g03109.01.t

Possible name(s)

AEBP1; F8; MFGE8

Gene model

Boleac.CG.SB_v3.S153.g03109

Location

S153 [30,088 / 31,417]

Sequences

Amino acid sequence

Length: 115

>Boleac.CG.SB_v3.S153.g03109.01.p
KIGEWIQVDFGSVKQVAGVVTQGRPPYXDPQWVSSFKIKCGTNVQNMSMIYKEGKEEIFE
GNTDENTEVNNRFPEPICCRFIRIYPQSWMNHISMRAEFVSGICFDNATLWSSSQ

Nucleotide sequence

Length: 395

>Boleac.CG.SB_v3.S153.g03109.01.t
AAGATCGGGGAATGGATTCAAGTTGATTTTGGGAGCGTCAAACAAGTTGCCGGAGTTGTG
ACGCAAGGAAGACCTCCATACCANGACCCTCAGTGGGTCTCGTCCTTTAAAATAAAATGT
GGGACAAATGTGCAGAATATGAGCATGATTTACAAGGAAGGAAAAGAAGAAATTTTCGAA
GGAAATACCGATGAAAACACCGAAGTCAACAACCGGTTTCCAGAACCAATTTGCTGCCGA
TTTATCCGGATTTATCCGCAGTCTTGGATGAACCATATCTCAATGAGAGCGGAATTCGTA
TCCGGTATTTGCTTCGATAATGCAACTCTGTGGTCTTCCAGCCAATAATCAACTATCAAT
CAGCTACGTGAAAGAACTTCACTGAAGGACTATAG

InterProScan

Gene3D	Galactose-bd-like_sf (IPR008979) - T[1-104] 1.6E-32
ProSiteProfiles	FA58C (IPR000421) - T[1-102] 25.241
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[3-99] 7.09E-28
Pfam	FA58C (IPR000421) - T[4-99] 3.8E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MFGM_HUMAN	36.364 %	76.3	1.23E-17
AEBP1_HUMAN	39.583 %	72.4	4.05E-16
FA8_HUMAN	36.842 %	79	2.13E-18