- Transcript 'KH2012:KH.C13.130.v1...' >
- Clone 'cijv032e23' >
- Transcript 'KH2012:KH.C12.47.v2....' >
- Clone 'cien41338' >
- Transcript 'Boleac.CG.SB_v3.S153...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S153.g03116.01.t
Possible name(s)
EXD3; EXOSC10
Gene model
Location
S153 [104,525 / 106,856]
Amino acid sequence
Length: 776
>Boleac.CG.SB_v3.S153.g03116.01.p
MDSDDDRNVPSSSKTSAGIXDVTEFSTKLLKAVSTAVKASSCLPHSGDDFDLYSSFNGFR
KFYANEGSRLTDQLNTLLKYQGMRLLSKRDSELSDVDDKYDRIVEANDAMLEQISALLEK
ASDPEKNIVDPNALLPSENTAQDIPKTVVSSWNRGKKHGKNQMFRLFHAQNISRPQTKFN
DKIDNANVPFVPKIKEKPNAIKPLPKALINLNLQAQDENISLAITHLIQQSRHYSSDDQN
IYAHPYQSELDALQFSAEQLIKTEPQKFSPFPSEVCQVLTAKMDLLDVIDHLKTCKEFAV
DLEAHSYRTFQGITCLMQISSRTKDFLIDTLALRSEIYRLNEVFTDPKIVKVFHGADFDI
QWLQRDFGVYVVNMFDTGQAARELGLGRFSLDFLLQKYCDVHADKKYQLADWRIRPVPEE
MRKYAQEDTHYLLYVYDVMKNELIAAADPTTEKDSRLLKVLQKSRGICLKLYEKPLINAE
SHLKLYEKWRSKKRLNEKQLELFRLLFLWRDAMARQEDESTGYVLPKHMLFQIAEIMPRE
AQGILACCNPVPPLVHQHVHSIHQLVIEARARSVTKKKGDSSSENAPIKTPVPAKPEIHE
YDDFLSCPHDRSHIHMPGRGKQNFIVEEVPEIEWSTFLGDVSFACSSTKKLDATHWDPYI
KYFDPAATCVKPVEFITTHEDLNIKTMLNPKYGWKLKKLEAPEEPRKKKKTNIKQPDTKE
EVIILSKLPQLQGQXRSSQPGTGEKXSKQAKKKAKNAAADFQPFQYQASHYDRFRK
Nucleotide sequence
Length: 2,331
>Boleac.CG.SB_v3.S153.g03116.01.t
ATGGACTCTGATGATGACCGGAACGTGCCGTCTTCGTCCAAAACGTCTGCGGGGATANTA
GACGTAACNGAGTTTTCTACAAAGTTGTTAAAGGCTGTCTCGACTGCAGTGAAGGCAAGC
AGTTGTTTGCCCCATTCTGGAGACGATTTTGATCTTTACAGCAGTTTCAATGGATTTCGC
AAATTTTATGCAAACGAAGGATCACGATTGACTGACCAACTCAACACCTTGTTAAAGTAC
CAAGGCATGCGATTGCTATCTAAAAGAGACTCGGAATTGAGTGATGTTGATGATAAGTAT
GATCGTATAGTAGAAGCTAACGATGCGATGCTAGAACAAATCTCAGCTTTACTGGAGAAG
GCAAGTGATCCAGAGAAAAATATTGTTGATCCCAATGCTTTGCTACCATCAGAAAATACA
GCTCAGGATATTCCAAAAACAGTTGTATCATCATGGAACCGGGGTAAAAAGCATGGAAAG
AATCAGATGTTTCGATTATTTCATGCTCAGAATATTTCACGGCCTCAAACAAAATTTAAT
GACAAAATTGACAATGCTAATGTTCCGTTTGTTCCCAAGATTAAAGAAAAACCTAATGCC
ATTAAGCCTCTTCCGAAAGCATTGATTAATCTAAACTTACAAGCGCAAGATGAAAATATC
TCTCTTGCAATCACCCATCTTATTCAACAGAGTCGTCATTACAGTAGTGATGACCAGAAT
ATTTACGCTCACCCATATCAATCCGAACTTGATGCCCTTCAATTCAGTGCTGAGCAATTG
ATAAAAACTGAACCACAGAAGTTCAGCCCATTTCCATCAGAAGTATGCCAAGTATTAACT
GCTAAAATGGATTTGTTGGATGTGATCGACCATTTAAAGACATGCAAAGAATTCGCTGTA
GACTTGGAAGCGCATTCATATCGAACTTTTCAAGGAATCACATGCTTGATGCAAATTTCG
TCAAGAACAAAGGATTTTTTGATTGATACTTTAGCGTTGAGATCAGAAATTTATCGATTA
AATGAAGTTTTCACCGATCCAAAAATCGTCAAAGTATTTCATGGTGCCGATTTTGACATT
CAATGGTTGCAGCGTGATTTCGGTGTCTATGTTGTGAATATGTTTGATACTGGCCAAGCA
GCAAGAGAGCTAGGCTTGGGTCGCTTTTCTTTGGATTTTTTGTTACAAAAGTATTGCGAT
GTACATGCAGACAAAAAATATCAACTTGCTGATTGGAGAATTCGTCCAGTGCCAGAGGAA
ATGAGAAAATATGCCCAAGAAGACACTCACTATCTCTTGTATGTTTACGATGTCATGAAG
AATGAATTGATAGCTGCGGCAGACCCTACCACAGAAAAAGATTCCAGGTTATTAAAAGTT
CTTCAAAAAAGTAGAGGCATATGCCTGAAACTGTATGAGAAGCCACTCATCAATGCCGAG
TCACATCTCAAATTGTATGAGAAATGGAGATCAAAGAAGAGGCTTAATGAAAAGCAGTTG
GAATTGTTTAGACTTTTGTTTTTATGGCGTGATGCAATGGCCCGACAAGAAGATGAAAGC
ACTGGATACGTTTTGCCAAAACACATGTTATTTCAAATTGCTGAAATCATGCCCCGTGAA
GCCCAAGGTATTCTAGCTTGCTGCAATCCAGTCCCACCATTAGTCCATCAGCATGTACAC
TCGATACATCAACTTGTAATAGAAGCTAGAGCAAGGTCTGTAACAAAGAAGAAAGGTGAT
TCATCTTCTGAAAATGCCCCGATAAAAACCCCTGTGCCTGCCAAACCAGAAATTCATGAA
TATGATGACTTCCTATCATGTCCTCACGACAGGTCTCATATACATATGCCTGGTCGGGGC
AAACAAAATTTTATCGTTGAAGAAGTACCTGAAATAGAATGGTCTACATTTTTGGGTGAT
GTATCATTTGCTTGTTCATCAACCAAAAAATTAGACGCAACTCATTGGGATCCATATATC
AAGTATTTTGATCCAGCTGCAACATGTGTCAAGCCTGTTGAATTTATCACAACTCATGAA
GATCTGAATATCAAAACCATGCTCAATCCGAAATATGGGTGGAAACTGAAAAAACTTGAA
GCACCCGAGGAGCCACGCAAAAAGAAAAAGACAAATATCAAACAACCAGATACCAAGGAA
GAAGTTATAATTCTCAGTAAACTACCGCAACTCCAGGGCCAGAANCGATCATCGCAACCA
GGAACAGGAGAGAAAANGTCAAAACAAGCGAAAAAGAAAGCTAAAAATGCTGCGGCTGAT
TTCCAACCGTTTCAGTATCAAGCCTCACATTATGATAGATTTCGGAAATAA
| Pfam |
Exosome-assoc_fac_Rrp6_N (IPR012588) - T[36-121] 3.3E-14 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[172-476] 1.18E-80 |
| SMART |
3'-5'_exonuclease_dom (IPR002562) - T[276-444] 2.3E-49 |
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[278-443] 9.3E-46 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[485-573] 3.05E-24 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[496-576] 16.376 |
| SMART |
HRDC_dom (IPR002121) - T[496-576] 1.3E-16 |
| Pfam |
HRDC_dom (IPR002121) - T[499-566] 2.5E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOSX_HUMAN | 49.01 % | 559 | 0 |