- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C6.108.v1....' >
- Transcript 'KH2012:KH.C5.23.v5.A...' >
- Transcript 'Boleac.CG.SB_v3.S156...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S156.g03217.01.t
Possible name(s)
RBMS1; RBMS2; RBMS3
Gene model
Location
S156 [221,057 / 234,638]
Amino acid sequence
Length: 365
>Boleac.CG.SB_v3.S156.g03217.01.p
MANGHSIGNGELSKTNLYIRGLSPNTKDEDLVELCKSFGKIVSTKAIIDPQTNLCKGYGF
VDFDRFESADIAVQQLKAKGIQAQKAKQQEQDPTNLYLSNLPGNFNEHDLEQVLLPFGQV
ISTRILRDNNGVSKGVGFARMESTEKCELIISKLNGKYLAGSTNASKDPLLCKFADGGPK
KNKQHQKFMNGRNWGGGELPFPFDPSHNGMGVGPGRMMMQPYLPGPGSQAYQLPGPPAWV
GHPQYIVPHATTPGTVISSVDPAALHLHXGVGQQLGQLTAQMTQLQLNPNATVPYGPNGV
APPYISHYSLAAAQVDEVMGHHGNPQQVANIPNDDQYSTFSTHTQKGMDCVVIGSRVKKR
KNELG
Nucleotide sequence
Length: 3,203
>Boleac.CG.SB_v3.S156.g03217.01.t
TGCTCTTTACAGCTTGTATATCCATTATATATTATATATATACATGTATTCCTTGTATAG
CCTAATCAGTATTTAACCCCTCGCATGTAATAAAAAAAACATTAACTATCCCCACCAATA
ATTTGCTTCCTACACCCTGCATCTGTGTGACGATCCCTGTTTATATACATACCCACCCTT
CCTGTACTTGTGTGCCGATACCNTATTCATTTATACTCAATAAGAAGAAGCCCAACCCCG
AAACCTTGATTTGTTCATCGGTGTGATATACATATACTATTCATTTACAAAAAGAAAAGT
ACGCAGCTCTTTTCGGTGTGATATCAACGCCGAATACCTTCCATCGTTTACTTTTGAAGC
ATGTACGTTTGGGCATCTAGTCCTTTNCAAGTTTGGCCTTACGCACACGCCGCCCCTTCT
CATCACGGTAGAACTATGCCACCTCCTTCGCCTTCTAGCGCAAGCAACACTTCATCACAA
CATTCCAACAGTGCAGGGATTGCAAACGAACAATCACATTGGTGGTCATTCGATGGCTAA
CGGGCATTCAATCGGTAACGGCGAACTAAGCAAAACAAATTTATATATTCGTGGATTGTC
GCCTAATACGAAGGATGAAGATTTAGTAGAACTATGCAAATCTTTTGGCAAAATTGTATC
AACAAAAGCTATCATTGACCCACAAACAAACCTTTGCAAAGGATATGGATTTGTAGACTT
TGATCGTTTTGAATCAGCTGATATTGCTGTCCAGCAGCTCAAAGCAAAGGGTATCCAAGC
TCAAAAAGCAAAGCAACAAGAGCAAGATCCCACCAATCTATATCTTTCCAATCTACCTGG
TAACTTCAATGAACATGATTTGGAGCAAGTGCTTCTGCCATTTGGCCAAGTCATCTCAAC
TAGGATTTTAAGAGATAATAATGGAGTGAGCAAAGGCGTGGGTTTTGCGAGAATGGAATC
AACTGAGAAATGTGAACTTATTATAAGCAAACTTAATGGAAAATATCTTGCGGGCAGTAC
AAACGCCAGCAAGGACCCACTGCTTTGTAAATTTGCTGATGGCGGCCCTAAGAAAAACAA
GCAACATCAGAAATTTATGAACGGTAGAAATTGGGGCGGTGGAGAACTGCCTTTTCCATT
TGATCCATCTCATAATGGAATGGGAGTCGGCCCAGGACGCATGATGATGCAACCGTACCT
GCCCGGACCAGGGAGCCAGGCTTATCAATTACCTGGTCCTCCAGCATGGGTTGGACACCC
ACAATATATCGTACCACACGCCACTACTCCCGGCACTGTGATTTCTTCGGTGGATCCCGC
TGCTCTGCACTTGCATCNCGGNGTTGGACAACAACTCGGACAATTAACAGCTCAAATGAC
TCAACTTCAACTTAACCCGAACGCAACAGTTCCGTACGGACCGAATGGGGTTGCGCCGCC
GTACATTTCACATTATTCTCTGGCTGCAGCTCAGGTGGATGAAGTTATGGGACATCACGG
CAATCCTCAACAAGTCGCCAACATCCCGAACGATGATCAGTACAGTACGTTTTCTACACA
TACGCAAAAGGGGATGGATTGTGTTGTCATCGGTTCCAGAGTCAAAAAGAGAAAAAATGA
ATTAGGTTGATTGATGTCAAGTGTTTTCTTACGGAAGCTTTCTTTGTACAAACTCGACGT
TGATTCAAGTGACATTAGAAGGCTGTTCTTGGGAATCATAGCCTTGGATNCTATAACGCT
TCGTTCGCTTCGAGACTCCTCATCGTTATTTCTAGATTAAAATGTTCGTCTTTTGTGGAG
AATATTTGTGTTTTATGTGCCGTTTTCAAGTGAAAATGTGCTCTTTTTATTGCTTTCGAA
ATCCGGAAAGAATCTTTTACATCATGTCACAGAGCACCTGTGTGTGAGGTCTGTGTTTTT
ATTTGTTGTAGCTAGGATAGGTATCTATCCAAACATTCTTTTTTTTCAATTTTTTCATCA
TTTTTCTTTTCAAATGAAAGGATTCCGATCGGTTGCTGTGGCGAACTCCTGGTTGTGTTA
GTGATGTGAACAATTTTTATGTACAATGACAATTTATGACTTTCAACCGCTTCAAATAAG
TGGCCAGAACTCACGCGTTGAGTTAGCTGCAAACATTTTTCCTCGCCTCCAAATGTCCAT
GCTTCAATCAAAATCCGTGATTGATTGATTGATTGATTTTGCTCTGATGTCTCCTAAGGT
TGGTTTGGTGATGCATCGACACGGATTTCATTTTCCGTTGTCACACTTTTCGGGTAATCT
TATTTCATTACCTGGTAAATCATGCTTTGATTCAATGCTTGATTTTTTCTACTGTGCTGA
AAATTGCTTGTTATCAAGTAAGATCGTGATGATTCTATATTTTGTTATGGTTGTTGCGTC
GCTATTTCCCCTGACTTTCCTTCTCGTTGTGACGTCACTATTTCGTAACAATCCTTCTCA
CATCCATCGATTCATTTGATGGGAAGTGTTGAGGAAAGGCGTTGAGAATAAAATGCAGTC
AGTCTGTAAATATCAGATTAGGTATCTAGAAACAACTTTAAAATATAGTTGCCGATTCTA
TGTGTAAAGTTTCCCAGATGAAATTTATTTTATGTTTCCAACGATTGCGTAATCGCGATT
GCATACTAGTCGATTTTTTGTCCCGTTTTCATAAAACTTAACTGTTGACGGGACTCTAAA
AATAATATTTTGTGTTGGCTTCAGTCGTTTTTTATGCTCAAGCCATTCTTTTCCAAAATA
TTCAAAAATTATGAAGCGTGCATATGTGTATGCTAAACGCTTGCTTTGACTGTAAAGTTG
AAGCTTGTGTCGTGGCGCAAATGGAATGAAATGAAGCTTGGTGCGGACTGATTTGAGACT
CGTGTCACGCTTTGATGATTTCAAAATGCACGTTAACTTTTCCTTCCGTCCGCTCTTCCA
ACCAACATTGTGTTTCTCTGCTTCGAACAAGTTTCAAGTCAGACTGTTTTTTCAGTTTAC
TGTGATTTTGCCATTCTTCAGAGTGAAATGTGTTGGGCAATACTGGTTTAGAGAATACCC
TAATGAAGCCCAAAGATATGAAAAATTGGTATTTACTGCTGCTTGAATGAATTTCGGATT
GGTATCGAGAAGAAGCCATCTTCTCGAGTTGGTTTACCGATGTAAATAAATGGATAGAAG
CGAGATGGCGAATGAAAATGACA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[11-91] 5.8E-21 - T[92-176] 2.4E-17 |
| PRINTS |
Hud_Sxl_RNA (IPR002343) - T[15-30] 2.9E-5 - T[99-114] 2.9E-5 - T[114-126] 2.9E-5 - T[158-175] 2.9E-5 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[15-88] 14.266 - T[94-177] 14.078 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[15-162] 2.1E-34 |
| SMART |
RRM_dom (IPR000504) - T[16-84] 6.6E-15 - T[95-167] 9.2E-12 |
| Pfam |
RRM_dom (IPR000504) - T[17-81] 9.0E-15 - T[96-162] 1.9E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBMS2_HUMAN | 48.324 % | 280 | 6.95E-92 |
| RBMS1_HUMAN | 47.011 % | 271 | 3.09E-88 |
| RBMS3_HUMAN | 50.662 % | 268 | 1.43E-86 |