- Transcript 'Cisavi.CG.ENS81.R67....' >
- Transcript 'KH2012:KH.L24.2.v1.B...' >
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- Transcript 'Boleac.CG.SB_v3.S160...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S160.g03381.01.t
Possible name(s)
FOXA2; FOXA3; FOXB1
Gene model
Location
S160 [113,137 / 114,790]
Amino acid sequence
Length: 466
>Boleac.CG.SB_v3.S160.g03381.01.p
MMLSSPPSKYPPFQQPYGVSMQNMVNPMQPSYGNSINPISLTGNPTPMNQAFAGGHLNGM
SSAAGVHAPPHASQMAVGVAGMGATYPGMNAAVGFASNLPIVPMGFNRRPDKAYRRNYTH
AKPPYSYISLITMALQSSKSKRMTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCF
VKVARSPDKPGKGSYWSLHDEAHNMFENGCYLRRQKRFKCPKKPNGKNSNKNGGEHSNML
EMENATPPPTPTMQDSPAGTPNSQPGNCEQDRVPTQAEEQPTIAEEVTEKRPPCNMLEHD
QQQRQQVSYSHIEDNVSAGHIQQMHPQQQHQGLHINQRHNSVSPHASTSHNGAMQNSSAA
NDMAHHHDTLSHSKSDPAMAYAHHQFYLVHGSNSSVAHSSNNIGRISTSPQDSQHHQQYY
QMQYGVESANGLQHPNMSHGTMEDGINDAYYQGCVPQHGTTNAAMA
Nucleotide sequence
Length: 1,401
>Boleac.CG.SB_v3.S160.g03381.01.t
ATGATGCTATCTTCCCCTCCGTCGAAGTATCCACCGTTTCAACAACCATATGGAGTTAGT
ATGCAGAATATGGTGAACCCGATGCAACCATCGTATGGAAATTCGATCAACCCAATATCA
CTTACTGGAAATCCGACACCGATGAACCAAGCTTTTGCCGGCGGGCATTTGAATGGTATG
AGTTCAGCGGCGGGAGTTCACGCACCCCCGCACGCTTCACAAATGGCGGTTGGTGTCGCG
GGAATGGGAGCGACTTACCCAGGTATGAATGCGGCTGTTGGATTTGCTTCNAACTTACCC
ATAGTACCGATGGGATTCAATCGTAGGCCTGATAAGGCGTATCGACGAAATTACACTCAT
GCCAAGCCACCGTATAGTTACATATCACTTATTACAATGGCGTTACAGTCGTCGAAATCA
AAAAGAATGACTTTAAGTGAGATTTATCAATGGATCATGGACTTATTTCCTTTTTACCGA
CAAAATCAACAACGTTGGCAAAATTCCATCCGACATAGTCTGTCGTTTAATGATTGCTTC
GTCAAGGTGGCGAGATCACCCGACAAACCAGGCAAAGGATCCTATTGGTCGCTTCATGAC
GAAGCGCATAACATGTTCGAAAATGGCTGCTATTTGAGACGACAAAAACGGTTCAAATGC
CCNAAGAAACCAAACGGCAAGAACTCTAATAAAAACGGAGGTGAACATTCAAATATGTTA
GAAATGGAGAATGCAACACCACCTCCGACACCTACAATGCAAGACTCCCCTGCCGGTACT
CCAAATAGCCAACCAGGCAACTGTGAACAAGATAGAGTACCAACACAAGCTGAGGAACAA
CCTACTATCGCGGAAGAAGTAACGGAAAAAAGACCACCATGCAACATGCTAGAACACGAC
CAGCAACAAAGGCAACAAGTATCATATTCTCATATTGAGGACAACGTTTCTGCNGGTCAC
ATTCAACAGATGCATCCGCAACAACAGCATCAAGGACTTCATATAAACCAACGCCATAAT
TCAGTATCCCCGCACGCATCCACATCACATAACGGTGCGATGCAAAATAGTTCAGCTGCA
AACGATATGGCACATCACCATGATACTTTATCTCATAGCAAAAGTGATCCTGCAATGGCG
TATGCACACCATCAGTTTTATTTGGTTCATGGGTCTAATTCATCTGTCGCACATTCTTCA
AACAATATCGGTAGAATATCAACGTCACCTCAAGACAGTCAACACCACCAACAATACTAT
CAAATGCAATATGGAGTCGAATCCGCAAATGGATTACAACACCCGAATATGTCTCATGGA
ACGATGGAGGATGGAATCAACGATGCATATTATCAAGGGTGCGTACCGCAGCATGGTACT
ACTAACGCTGCCATGGCTTAG
| Pfam |
Fork-head_N (IPR013638) - T[10-121] 7.6E-9 |
| SMART |
Fork_head_dom (IPR001766) - T[120-210] 2.3E-58 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[120-221] 2.3E-46 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[121-216] 1.81E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[122-216] 37.92 |
| Pfam |
Fork_head_dom (IPR001766) - T[122-206] 2.8E-37 |
| CDD |
Fork_head_dom (IPR001766) - T[122-199] 1.33504E-49 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[122-135] . |
| PRINTS |
Fork_head_dom (IPR001766) - T[122-135] 6.6E-24 - T[143-160] 6.6E-24 - T[166-183] 6.6E-24 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[166-172] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 81.25 % | 206 | 1.41E-62 |
| FOXA2_HUMAN | 80.833 % | 220 | 1.5E-66 |
| FOXB1_HUMAN | 64.815 % | 167 | 8.91E-48 |