- Transcript 'Moocci.CG.ELv1_2.S41...' >
- Transcript 'KH2012:KH.L153.37.v2...' >
- Clone 'cien102848' >
- Transcript 'KH2012:KH.L170.28.v5...' >
- Transcript 'Boleac.CG.SB_v3.S161...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S161.g03416.01.t
Possible name(s)
RDH12; RDH13
Gene model
Location
S161 [216,667 / 219,568]
Amino acid sequence
Length: 309
>Boleac.CG.SB_v3.S161.g03416.01.p
MAVRSATRAWVKGGWVTSPVKLTDKNVLITGGNIGLGYETALDLAKRDARVIIACRDMEK
ANAAKTQIENETGSKKISTRCLDLSSFASIREFADDFNRTEDKLDILMNNAGIMKHPQAK
TKDGFEMHFGVNHLGPFLLTNLLLDKIKHTGAGSRIITVSSIVNYLGRMKWTDLNWENRR
YSAMGAYNASKLMNVLFTKELARRLEGTGITANCVHPGVVRTTLNRTSGQDLSFLGRLTD
VVFKLNFVSITPKHGAQGQIYLAVAPEAEKVTGQYYSGTTKWFVKWTGASKSNAKKLWQI
SEELTEQKS
Nucleotide sequence
Length: 930
>Boleac.CG.SB_v3.S161.g03416.01.t
ATGGCAGTTAGATCAGCAACTCGTGCCTGGGTTAAAGGCGGTTGGGTGACAAGCCCTGTC
AAGTTGACTGATAAAAATGTTTTGATCACGGGCGGCAATATCGGCCTCGGCTATGAAACG
GCATTGGATTTGGCGAAACGAGACGCGAGAGTGATCATTGCTTGTAGAGACATGGAGAAG
GCGAACGCCGCGAAAACACAGATTGAGAACGAAACGGGGTCGAAAAAAATATCTACAAGG
TGTCTGGATCTATCGTCGTTTGCATCGATCAGAGAATTTGCGGATGATTTCAACCGTACC
GAAGATAAACTTGACATCTTGATGAACAATGCCGGTATCATGAAACACCCGCAAGCGAAA
ACGAAAGACGGTTTTGAAATGCATTTTGGCGTGAACCATCTCGGACCATTTCTACTAACG
AATTTACTGTTGGATAAAATAAAGCACACGGGCGCAGGCAGCAGGATAATCACTGTCTCT
TCGATAGTCAACTATTTAGGAAGAATGAAATGGACAGATCTAAACTGGGAAAACCGGCGG
TATTCAGCCATGGGAGCCTACAACGCAAGCAAACTCATGAACGTTCTATTCACGAAGGAA
CTTGCTCGTCGACTTGAGGGAACGGGAATCACAGCGAACTGTGTGCATCCAGGCGTCGTC
CGCACCACCCTGAACCGAACCAGCGGGCAGGATTTAAGCTTCCTAGGAAGACTTACAGAC
GTTGTTTTCAAACTTAATTTCGTCTCAATTACACCAAAGCACGGAGCTCAAGGACAAATT
TACCTCGCCGTGGCACCAGAGGCTGAGAAGGTTACCGGACAATACTACAGCGGCACTACG
AAATGGTTCGTGAAGTGGACCGGCGCAAGTAAGAGCAACGCTAAGAAGCTTTGGCAAATA
AGCGAAGAGCTTACGGAACAGAAATCTTAA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[22-284] 4.6E-60 |
| Pfam |
SDR_fam (IPR002347) - T[25-231] 8.3E-34 |
| PRINTS |
SDR_fam (IPR002347) - T[26-43] 5.5E-18 - T[102-113] 3.3E-7 - T[102-113] 5.5E-18 - T[148-164] 5.5E-18 - T[154-162] 3.3E-7 - T[187-206] 3.3E-7 - T[187-206] 5.5E-18 - T[208-225] 5.5E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 45 % | 218 | 1.49E-69 |
| RDH13_HUMAN | 46.959 % | 239 | 1.5E-77 |
| RDH12_HUMAN | 45.364 % | 226 | 7.32E-73 |