- Transcript 'KH2012:KH.C8.163.v3....' >
- Transcript 'KH2012:KH.C8.163.v3....' >
- Transcript 'Boleac.CG.SB_v3.S16....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S16.g03321.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S16 [24,391 / 27,502]
Amino acid sequence
Length: 379
>Boleac.CG.SB_v3.S16.g03321.01.p
MEQDEEEEQTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIM
RLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL
EKSYELPDGQVITIGNERFRCPETMFQPSFIGMESSGVHETTYNSIMKCDIDIRKDLYAN
NVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW
ITKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,426
>Boleac.CG.SB_v3.S16.g03321.01.t
ACGAGAAATAGACGCAAAAGGAAAGGGTTATGTCTCCCGCTGAACGTAAGCTATATAACA
AGCGTCGAGCAGTCGACGCCCTCATTCGCTCAGAAGACACCGACCAGGACACCTAAAAGG
AAATCCAATAGGAACGTAAGCACAACAAAATGGAACAAGACGAAGAAGAAGAACAGACCG
CCCTGGTGTGCGACAACGGTTCCGGATTAGTGAAAGCCGGTTTCGCCGGAGATGACGCTC
CCAGAGCAGTGTTCCCATCCATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGTCGGCA
TGGGTCAAAAAGACAGCTATGTTGGTGACGAAGCCCAGAGCAAAAGAGGTATCCTCACTC
TGAAATACCCCATCGAACACGGTATCATCACCAACTGGGATGATATGGAGAAGATTTGGC
ATCACACCTTCTACAATGAACTCCGTGTAGCACCTGAAGAACACCCAGTGTTGCTCACCG
AAGCTCCTCTCAACCCAAAAGCCAACCGTGAAAAGATGACCCAAATTATGTTCGAGACAT
TCAACGTTCCGGCTATGTACGTTGCTATCCAAGCCGTACTTTCCCTTTATGCTTCAGGCA
GAACCACAGGTATCGTTCTTGATTCCGGTGATGGCGTATCACACAACGTACCAATCTATG
AAGGTTACGCCCTCCCACACGCCATTATGCGTCTGGATCTTGCTGGACGTGACCTCACAG
ATTACCTTATGAAGATCCTCACTGAGCGTGGCTACTCCTTCGTAACAACAGCTGAGCGTG
AGATTGTCCGCGATATCAAAGAAAAATTGTGCTATGTTGCACTTGACTTTGAACAGGAAA
TGGCCACCGCCGCTTCTTCTTCTTCACTTGAGAAGAGCTACGAACTTCCTGACGGTCAAG
TTATTACCATCGGTAACGAGAGATTCCGTTGTCCAGAAACTATGTTCCAACCATCTTTCA
TCGGTATGGAATCTTCTGGTGTACATGAAACCACTTACAATTCCATCATGAAATGCGACA
TCGACATCCGTAAAGATTTGTACGCTAACAACGTATTGTCTGGAGGTACCACCATGTACC
CAGGTATCGCTGATCGTATGCAAAAAGAGATCACCGCCCTCGCCCCAAGCACAATGAAGA
TTAAGATCATTGCTCCTCCAGAGAGGAAATACTCTGTATGGATCGGAGGATCCATTCTCG
CTTCCCTTTCTACTTTCCAACAGATGTGGATCACGAAGCAAGAATACGATGAATCAGGTC
CGTCTATTGTCCACAGAAAATGTTTCTAATTTTGATGCTGATCTAAAGAAACTTCGCTCT
ATGTTTTCATATGGGCTTTGCCATAAAATCGGAAAATTTCTAGTTTGTGAACTACAGTTA
GANTTTGTCATTGATATTTGCGCACAATAAACATTTGAGAAGATCA
| PANTHER |
Actin (IPR004000) - T[5-378] 2.0E-267 |
| Pfam |
Actin (IPR004000) - T[7-379] 2.5E-149 |
| SMART |
Actin (IPR004000) - T[9-379] 1.6E-238 |
| PRINTS |
Actin (IPR004000) - T[30-39] 6.8E-58 - T[53-64] 6.8E-58 - T[65-87] 6.8E-58 - T[119-132] 6.8E-58 - T[144-163] 6.8E-58 - T[240-256] 6.8E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[57-67] . - T[360-368] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[108-120] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96.8 % | 768 | 0 |
| ACTS_HUMAN | 97.067 % | 770 | 0 |
| ACTC_HUMAN | 97.067 % | 769 | 0 |