- Transcript 'KH2012:KH.C11.535.v1...' >
- Clone 'cicl076c06' >
- Transcript 'Boleac.CG.SB_v3.S171...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S171.g03727.01.t
Possible name(s)
IGSF10; SLIT1; SLIT3
Gene model
Location
S171 [135,955 / 141,992]
Amino acid sequence
Length: 397
>Boleac.CG.SB_v3.S171.g03727.01.p
MKVYTCIIAVLFCFSLHIAHTSSQQSKCPKELRNCSCSSVRLACDLKGFTIFPENISPEH
AIQDLSLGQNNLTEINDNHLRXFTHLRYLNLRENEILTISENAFYNNKMIHMIDLSANRL
SSLPINLFKRLKSLEDVYLGENQLKVIETAHFGGLVNLKKIRLHDNQLTKVGSDAFLDSP
GMTELYLENNKLQTPERNWLLHFDHTEPSGYELYLDANPWSCDCRMKEFHDWAIRKNWFT
HAPKGKEKSRAKFVLNAPSASDSGEYICNASGHRQSKTVVSVIAVIDINIHKHPAPVVSI
VFVTLLVVAILLGMTVWYYKKYRPKSQYGRLPNDPKFDDGETASYAKNNAESMRVSLSRP
SGQSPYQSAITSHVSRGAETDDDEDVTEYHKDTEYLV
Nucleotide sequence
Length: 3,031
>Boleac.CG.SB_v3.S171.g03727.01.t
AATATACAATGAAAGTATATACTTGTATTATAGCAGTATTATTTTGTTTCTCCCTGCACA
TAGCGCACACGTCATCGCAACAAAGCAAATGTCCAAAGGAATTGCGAAACTGTTCGTGCT
CGTCGGTGAGGTTGGCGTGCGATCTGAAAGGATTCACGATATTTCCTGAGAATATCTCTC
CGGAACATGCCATACAGGACTTGTCATTGGGTCAAAATAATTTGACTGAAATTAATGATA
ATCATTTGAGATTNTTTACACACCTCAGATACTTGAATCTTCGTGAAAACGAGATTTTGA
CAATATCGGAAAATGCGTTTTACAATAACAAAATGATTCACATGATTGATTTATCCGCGA
ATCGTCTATCAAGTCTTCCAATCAATTTATTCAAACGTCTCAAATCTCTTGAGGATGTAT
ACCTTGGAGAAAACCAATTGAAAGTCATCGAAACTGCCCATTTTGGAGGATTAGTAAACC
TCAAGAAAATAAGACTTCACGATAATCAATTGACAAAAGTAGGAAGTGATGCGTTCTTAG
ACTCTCCAGGCATGACCGAACTGTATCTTGAAAACAACAAACTTCAAACACCTGAAAGAA
ACTGGCTACTTCACTTCGATCATACTGAACCGAGCGGATATGAATTGTATCTGGACGCCA
ATCCTTGGTCATGCGACTGCAGAATGAAGGAGTTCCACGACTGGGCGATAAGAAAGAATT
GGTTTACTCATGCACCGAAAGGGAAAGAGAAGAGTAGAGCNAAGTTCGTTTTGAATGCGC
CATCAGCCAGCGACTCTGGTGAATATATTTGTAATGCTTCAGGACACAGGCAAAGCAAAA
CTGTCGTTTCGGTGATCGCAGTAATCGATATCAATATCCATAAGCATCCGGCACCTGTCG
TTTCAATCGTATTCGTGACCCTCTTGGTAGTAGCAATACTCCTCGGGATGACGGTTTGGT
ATTACAAGAAATATCGACCAAAATCTCAATACGGAAGACTTCCAAACGACCCGAAATTTG
ACGATGGTGAGACAGCGTCGTATGCAAAGAACAATGCGGAATCAATGAGAGTATCCTTAT
CGCGACCAAGTGGTCAATCACCCTATCAAAGTGCTATTACGTCACACGTTTCTCGTGGAG
CAGAAACCGACGATGATGAAGACGTCACGGAATATCATAAAGACACTGAGTATCTTGTTT
AAAGTTGCGCTTTCGTACTTTTTTTACGACCTTGGCTCATGGTACAGAATATTTTATGCA
AAACTGCCTTCGGTGCTAAGTTAATACCCCACATCCTTGTCGGTATTCAAGAAGGCTGTG
CCAGTGTGGTAGCTGAGCTGACATAGGACAAAGGGTCATAGGATATCAGTTTTGGCTCGG
GAGTTGAAGGAAAGCACCAATATGTTGACGTTCCCAGTCGCATATTGGTGATTTCACAAT
GAAGTGAATATGGTCCAAGTACCGAGCTTTGATCGCGGAATCTACATAAACCAATACGGC
TTGAACATTACTGATTGTTAAAGGGGTCTGCGTTCAAAATATGATGATGGCTCAAATTAG
AGATGGAAGGGTATTAATAACTTGTGGCAGTGATCAATTTCCACCGAAATACACGGTAAT
GCTATGGTTGCAATTTGAAAATCCATATCATAACGGTTTTTGGGGAATCCCCTCTCCATT
AGCCAATCATGTCCTTCAATTTGGTTTAGTTGGCCATTGCTACAAATTTTGGCCCAACTG
TGTACAATACCACTTTGACGTTTTTTGACATTCCATGAAGTAATATGCATTGCCTTAATG
AGATGTGTTTTCATAAATGTTGCTCTACTCTAGGCCTATGTCCAACTCTCCCACTTAATT
TCACCGTAGGGTGTTATCAACTGTGTAACATATTGTCGACGGCTGCAAATTTGAAATATT
GCTTACGGTCGACTGGTTTTCTGTTACTAACTGAACGTCAATCGTCACTCTTGTGCACTT
AAATCGCTAGTATAGGCGCTGCTAGGATTAGGAATATCATGGTGGCTAAACAAGGAGAGG
TTATAAAACTCTGACGGCGAGTGAGATTCACGATTCCACCGCAATATGCTGTCCAAAGCA
ACATGAGCCTGAGTTTCCACTGGCTCTACTTTAAAGGGGGCCTGCGGTCAAAATATCACG
GCGTTTCAAATTAATGATGGAAGGGTGTAATGGCTAGTGGCAACTACGACTTGCCACTGA
AATGCGCGGTAATGGTTTCAACTTAAAAATCCGCAACGAAAGAGGAATCGCAACAAAATA
GAAGCACATGATTGGCTAATAGAGACCGGGATTCCTCAGAAACCCTTCGTGCTGGTTTTT
CAAATTGCAACCATGTCAATACCGTGGGTTTCGAGGGGTAATGACCATTTCCAAACATTA
CACAACCCTTTCATGTTAAATTCGAGTTATCATATTTTGATCGCAGGCCCCCTTCAACTC
AACATACCGAAGCACAATTCAGAAGTATGTTAACGTTCAAGAAGTGAATATGCGCGATAT
AATCATCAAACGTTCTATGTTGGAACGCGTCGTATCTATCATATCTATCATGTATATACG
ACGGCGCATGACGGATATCTTCAACATATCCATGACCAATGATAAATCCATACCTATGAT
ATATATTTTCCCACACCATCAAATACTGACGCAGCCACCTTCATATCATTTTGTACTTTT
ACTGCAAGCATCCGCATGGGGTTGCTTGATATTGTCTGTGGTTTTGACGAAAATTTACGA
CGAATTTTATAGCACAAACGTAACATGTATATATAGACCTTCCTTGAATCAAAAAGCTTA
AAACCTATAAATGTAGGCTTCCGTGCGATGCTTCGTAACCTATTTCCTAAATACCAGCGA
TTAAATATATCAGATTGTGTATATATAACAGTTTTATTTCGTATGACCTTTGATCCATTT
TCTGCTTGATTGTGATGTTTTTGCCAATATACACTGATAGAATAGGCTATGTATTTATGA
GAGTACTCGTATGAGTCTACTTGATTGTGAT
| Gene3D |
LRR_dom_sf (IPR032675) - T[27-284] 4.8E-46 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[61-81] 5.556 - T[85-106] 7.404 - T[109-130] 5.209 - T[133-154] 5.001 - T[157-178] 7.05 - T[181-202] 4.763 |
| Pfam |
LRR_5 (IPR026906) - T[65-180] 4.4E-13 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[83-106] 0.96 - T[108-130] 270.0 - T[131-154] 15.0 - T[155-178] 0.25 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[195-280] 7.105 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SLIT1_HUMAN | 30.435 % | 89.7 | 3.86E-19 |
| SLIT3_HUMAN | 30.244 % | 89.7 | 3.85E-19 |
| IGS10_HUMAN | 27.059 % | 97.1 | 1.36E-21 |