- Clone 'AHC0AAA9YI08' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Boleac.CG.SB_v3.S172...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S172.g03742.01.t
Possible name(s)
DLL1; NOTCH2; NOTCH3
Gene model
Location
S172 [30,459 / 32,327]
Amino acid sequence
Length: 473
>Boleac.CG.SB_v3.S172.g03742.01.p
MLDGKDRIVKNAHWHRDAVMELVINLGNVIVYQDGAVGTVQFVNLKVCERTKPCMNDGTC
INSGNGDYLCVCKEGFEGRKCEIYNPYDPSRDNMYVQPVSSTTLKPVIPVRECKXGGMCK
ISALKGGCEKCICKPGFTGDLCETTVNDCLAMPCANGGKCFDMHNDVHCECERGFTGRFC
EDDIDECEVVGNTGLCHNGGTCVNTFGSYDCVCSSGYTGVRCDEALVVEVEKETYIPLTT
RMIIAAEKATTLFETTTSLPMEKSVAPEKKVPDHGTLIIHEVTYKKTNSTMLILTFLFMG
IAILILGAILGLVWVRCFRNQASVPPEKDNEIAXDTRIKIPTVAKKVKMNRKPIYRPRST
VIVETASDSIEEIVDESTQPCIPHKELKRENVPDCPSPPPPYALSAVDVRRQSFVRQPVF
VALPPKERQSTSQISEKRRXLMAAYDIASTDDMAENTSLLEADSPTLSHKIVV
Nucleotide sequence
Length: 1,422
>Boleac.CG.SB_v3.S172.g03742.01.t
ATGCTGGATGGGAAGGACCGAATTGTGAAAAATGCACATTGGCACCGAGATGCGGTCATG
GAACTTGTCATCAACCTTGGCAATGTAATTGTTTACCAGGATGGGGCGGTCGGCACTGTA
CAATTTGTGAATCTAAAAGTTTGCGAGCGTACCAAACCTTGTATGAACGACGGGACTTGT
ATCAACAGTGGGAATGGAGATTATCTTTGTGTCTGTAAGGAAGGATTTGAAGGACGAAAA
TGCGAAATTTACAATCCATACGATCCATCTCGAGATAATATGTACGTCCAGCCGGTCAGC
AGCACTACATTAAAGCCAGTGATTCCTGTTAGAGAATGCAAGAANGGNGGAATGTGCAAA
ATATCAGCTTTGAAGGGTGGCTGTGAAAAATGTATCTGTAAACCTGGATTTACTGGCGAC
CTGTGCGAGACAACGGTGAATGATTGTTTGGCAATGCCTTGTGCCAACGGTGGCAAATGC
TTCGATATGCACAACGACGTCCATTGCGAATGCGAAAGAGGCTTCACCGGTCGATTTTGT
GAAGATGACATCGATGAATGCGAAGTCGTCGGCAATACAGGCTTGTGCCACAATGGAGGC
ACTTGCGTCAATACGTTTGGATCATACGATTGTGTATGTTCAAGCGGATATACTGGAGTA
AGGTGCGACGAAGCCCTTGTTGTGGAAGTTGAAAAAGAAACATATATCCCACTTACTACG
AGGATGATTATCGCAGCTGAAAAGGCAACAACTTTATTTGAAACAACAACCTCCCTTCCG
ATGGAAAAATCAGTGGCGCCTGAAAAGAAAGTTCCTGATCACGGCACTCTCATCATTCAT
GAAGTTACGTACAAGAAAACCAACTCCACAATGCTAATCCTCACCTTCTTATTCATGGGA
ATCGCTATTCTAATTTTGGGAGCAATCTTAGGATTGGTATGGGTACGATGCTTTCGAAAT
CAAGCGAGTGTACCACCGGAAAAAGACAACGAAATTGCTCNTGACACACGCATCAAGATT
CCTACAGTTGCTAAGAAAGTGAAAATGAATCGAAAGCCGATATACCGACCTCGATCGACT
GTTATTGTTGAAACAGCTTCAGACTCTATTGAAGAAATCGTCGACGAATCAACACAACCT
TGCATACCTCACAAGGAATTAAAAAGGGAGAACGTACCAGACTGTCCGTCACCTCCTCCA
CCCTACGCACTAAGCGCGGTAGATGTTAGGCGGCAATCTTTCGTACGCCAACCTGTCTTT
GTTGCGTTGCCGCCTAAAGAGAGACAGTCAACGTCACAGATTTCAGAAAAACGAAGGNTT
TTGATGGCAGCATATGATATTGCATCAACGGACGATATGGCTGAAAATACTTCATTATTA
GAGGCTGATTCGCCTACGTTATCGCATAAAATAGTGGTGTAA
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[44-82] 20.631 - T[103-143] 8.364 - T[145-181] 19.338 - T[183-223] 21.611 |
| SMART |
EGF-like_dom (IPR000742) - T[47-82] 7.4E-6 - T[112-143] 76.0 - T[148-181] 2.6E-4 - T[186-223] 1.5E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[48-82] 9.7E-4 - T[145-181] 0.0013 - T[183-223] 9.7E-12 |
| Pfam |
EGF-like_dom (IPR000742) - T[48-79] 7.5E-8 - T[149-178] 8.6E-6 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[70-81] . - T[70-81] . - T[131-142] . - T[131-142] . - T[169-180] . - T[169-180] . - T[211-222] . - T[211-222] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[183-211] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[183-220] 6.4E-9 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[202-213] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOTC3_HUMAN | 36.612 % | 115 | 4.74E-27 |
| NOTC2_HUMAN | 35.533 % | 116 | 2.11E-27 |
| DLL1_HUMAN | 33.803 % | 109 | 1.93E-25 |