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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.101.v3...' > 
  2. Transcript 'Boleac.CG.SB_v3.S17....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S17.g03643.01.t

Possible name(s)

GMDS; TGDS; UXS1

Gene model

Boleac.CG.SB_v3.S17.g03643

Location

S17 [133,180 / 140,115]

Sequences

Amino acid sequence

Length: 369

>Boleac.CG.SB_v3.S17.g03643.01.p
MQTGDSANGKSCEPSQKLSKRVALLTGITGQDGSYLTEFLINKGYEVHGILRRASQPNTQ
RIEHMYADRATHKMGKMILHYGDLTDSTCLVKIISQIQPQEVYNLAAQSHVKISFEIAEY
TADVDGLGTLRILDAIRTCGLSDKVRFYQASTSEMFGKVQEIPQKETTPFYPRSPYAAAK
LYAHWITVNYREAYNMFACSGILFNHESPRRGFNFVTRKISRSVAKIHLGLQEYMELGNI
DSKRDWGHARDYVEGMWMMLQQDQPDDYVLATNETHSVREFVEKAFELIGVDIAWKGKGT
DEVGYDKADGAVRVKINPRYYRPTEVDFLLGDATKAKKVLGWEPKIKFEELVKDMVEADI
AVMKRSPNA

Nucleotide sequence

Length: 3,010

>Boleac.CG.SB_v3.S17.g03643.01.t
TTTTGTGCTTTCCAGGCATTTTTCATTNCAAGTTTATTATAACGCTTGAATTACACCATG
CAGACCGGAGACAGTGCCAATGGGAAAAGCTGTGAACCATCACAGAAACTATCCAAACGG
GTTGCACTGCTCACAGGAATCACTGGTCAAGATGGCTCATATCTGACAGAATTTCTTATC
AATAAAGGATATGAGGTTCACGGCATTCTGAGACGGGCAAGTCAGCCAAACACACAGAGA
ATCGAACATATGTACGCTGACCGTGCCACCCACAAGATGGGGAAAATGATTCTGCATTAT
GGCGATCTTACTGACAGCACCTGTTTAGTTAAAATCATCAGTCAGATCCAACCGCAAGAG
GTCTACAACCTGGCTGCTCAGAGTCACGTCAAAATCTCGTTTGAAATCGCAGAATACACT
GCCGATGTCGACGGTCTTGGCACTCTTCGAATTTTAGACGCAATCAGAACGTGCGGCCTG
TCGGACAAAGTCAGATTCTATCAAGCATCAACGAGTGAAATGTTCGGAAAAGTCCAAGAA
ATCCCTCAAAAAGAAACGACTCCATTTTATCCTCGATCTCCATATGCTGCCGCCAAGCTC
TACGCTCACTGGATCACGGTGAATTACCGCGAGGCTTACAACATGTTCGCATGCAGCGGC
ATCTTATTCAATCATGAAAGTCCGCGTAGAGGCTTCAACTTTGTTACTAGGAAGATTTCA
AGAAGTGTGGCCAAAATCCATCTTGGACTTCAAGAATACATGGAGTTGGGTAACATCGAC
TCNAAACGTGATTGGGGACACGCCAGAGATTATGTAGAAGGGATGTGGATGATGCTTCAA
CAAGACCAACCAGACGATTACGTGCTAGCAACCAATGAAACCCACAGTGTTAGAGAATTT
GTAGAGAAAGCCTTTGAGCTCATTGGAGTCGACATTGCATGGAAAGGCAAGGGGACCGAT
GAGGTCGGTTACGATAAAGCCGACGGTGCAGTCAGAGTGAAGATCAATCCACGATATTAC
CGTCCCACCGAAGTCGATTTCTTGCTTGGTGACGCAACAAAGGCTAAAAAGGTTCTGGGA
TGGGAACCGAAAATCAAGTTCGAAGAATTGGTCAAGGACATGGTAGAAGCCGATATCGCT
GTGATGAAAAGAAGTCCAAACGCCTAAACTTTGACCTATGACCTCTCGCGAGTTCTTCAA
AGACCCAAGCTCTTCAAACGCCGTAACTTCCGATGTAGACCTATTTCTTGTAGAGTCAAA
GTGGTAGGATTTTTCCCAACTGAGGTCAACCCCTTGTTTTAAACCAGTCTTTTATAGTCC
TAATGTTGTCTACTTCCTACTTTCTGCAACAGATCTTGAACTTGTGGTAAAGTATGGCGG
CTGTTGAGCCCAGGTCCTTCGGTTTTTAGAAGTACCAGTTGAGTCGCTTCGCCGAAAACT
GCACTTCAAGTCGAGTCATTCGCCTCAGTGACTTTGGTCAAGTACCTGAACTCAGTTTTG
CAAGGAAACCATCAATGGCCAAGGTCAGGATCAAGCACTTCGGTTGCTTTGCACCCATAT
TATTCAAAGCGACTCGATGGTGTAGGCGTAAATACCATCCATTTAATTGCAACTCGCCCA
CCCTCTCACCCACCCTCCCTAATTTTTCATGGATAATCCTACTTTTTGTCCTCATTTTTT
TTGTAGCTAAACGTAGTTACGTAATTTTGTAGCCTCCCTTCATCTAAGCAAATTATCACG
TCATAATGCACTCGCGTAGGCGATTGAACACAACGACACATGAATTTATATTGTTGCTCG
GTTAGCATTCTTGAAACATAGGACTCTCCAGTGATGCAGTCTAACTGTCGTAACCAACGG
CAACAAAGCAGTCGATCGACCAATCGCAATGCAGCTTTTTTACTATCAAATTTTGAATGC
ATTAGTTGAGAATATCTTTAATTTATAACGCCAACAGCGAATGTGTCACATAGCTCCTCC
CACTCTGTGAGCCGCGGTACCTTACCCGTTACAGGTACGGCCGGTTATGGGTCACGAGCT
CACGAGCCCATTTTGGGCCATGTCACGAGCCCATTTTGGGCCATGCCACGACCATGAACA
TGGCCACTTCGTTCCATCCTCCATTATTCTATTGCTTCAACCCGTAGTAAACAAGACAAT
GTGCGTTCCGTAGGTACTTCATGTTGTGTTTTTGTGTAATTTGCCGTGCTAGATATTATT
CAAATGATGTTTGTTAACTGTGTAGTTCGGCTACAGTGCCTGGTGACGCAGCCTTTTCCC
CGCACAGTGCCATATAAGGCACCTTTGGAGGTGCAAAGTGACCGGTTTCTTGCTTTCATA
GTTTTCCAAAAAAGTCCATTCTTAGGTTCTCTCATTGAAAAAGCTGGACCCTGTCACATT
AATATCCCCCTTCCCCGCAGGAATCCAAATAAGCATCATCAGGGACTTCAAAGTCAGCCA
CAGTCTCATGTTGCAAGCTTGTTTGAGCTTCGTCAAACTTTGTATTTTTGAACTGCCCGT
ACTCAGTATAGTCAAGCCGATCTGTTGCATCTTCAATGTAGTTGGCGGATTTTATCTTCA
ATAGTAATTATCCACAGTGTGCACAACGCGAGACAAAACCTGATGTGAAGATTAAATTTA
ATCTCCTATTTGCAGTTGGTGATTTAGCGTCATCCAGATTGTAGAAGTTGTCTCTGCAAC
TCCACACATCGCTCTGTCTTCGATCTACAATTACTTGTGAATTCGAGTTCCGTCGAAAAT
GAACCTTTTGACCCGCACGCACATTGCACATGCTTGCAATGGCTCTTCCCCTCTAAAAAC
AGGCTAAGAGACATGAGAAACAGAGCAATTGACTGAAAAAACGTCATTCCCCCCGGGAGT
CCCTGCTTTAGCTGACTCGGATTTTGTCTTGAACTTTACACAATGCTGCTGTTCAGTTAT
TATCGTACGTTAACCTATTCTGTGCATCTTCTGTGTTTGTGAAGCTCACGTTCTCGAAAT
ATAAGCGCAC

InterProScan

PANTHER
GDP_Man_deHydtase (IPR006368) - T[15-367] 3.7E-175
TIGRFAM
GDP_Man_deHydtase (IPR006368) - T[21-362] 2.5E-183
Hamap
GDP_Man_deHydtase (IPR006368) - T[21-365] 57.472
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-359] 2.66E-82
Pfam
NAD(P)-bd_dom (IPR016040) - T[24-355] 1.9E-157

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GMDS_HUMAN 67.857 % 535 0