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  1. Transcript 'Boleac.CG.SB_v3.S180...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S180.g04004.01.t

Possible name(s)

KHDRBS1; KHDRBS2; QKI

Location

S180 [179,488 / 199,659]

Sequences

Amino acid sequence

Length: 409

>Boleac.CG.SB_v3.S180.g04004.01.p
MLPKPAETMISPMDSSSSSISGSEKQICCPSNTFGSNSSFEEDKKIKDKCSYLKALLQDK
KQLQAFPAVFIHVERILDEAHSTAMNIVPVNCYAPTVSQPLHRMTTAIAPTLQTLNAANA
QLNLHNSTARANGLNAANIIGSTQTLMQSIPSDSDNKTKERCKYLQQLLNDRKQCQSYPS
IFQHVERLLDEDHPEYNFVGRILGPRGLTAKQLEQEAKCKIMVRGKGSMRDKKKEEMNRG
KPNWEHLNDELHVLITVEDTENRARLKMKRAVDEVNKLLVPAEGEDDLKKKQLMELAIIN
GTYRDFTAQPRLQPXQHVLSIPGMRSPTPGQPNTNVLTTPIITRLPNGQTVIANGSAPPP
HPLIAPPEGAFYYTTPLEYPYTGLVATQGTSLLEYSFPDPTLLGKAIHI

Nucleotide sequence

Length: 4,888

>Boleac.CG.SB_v3.S180.g04004.01.t
AGCACACTAAACTCATAGTTGCCAGCAACATAATATACTTGTATAGCATTTTAACACCGA
AAAATCATCAAATTTTAACCAAGACTTTTTTCACGCATAATTTCCACTGCAACTGACAAG
ATTGAGGCCATAAGCAATTATCCGCATTTGCCATTTCCAGCAAACTTTGGACAACCTCAC
ATCCGTTCAGTCCCGAACGCGATACCGCAATTCCAACCACCTACAGCACCATTTACAGAA
TCAGCCAAGATCTTTGTCCAGCATCACGCAGGACAGTTTGGNTATAACGGTCAAATTAGC
CAAACAAAACCCATTGCCGCACCAGTAGCGGTTCCAAATATGCTTCCAAAACCTGCTGAA
ACTATGATAAGCCCTATGGACAGTTCCTCTTCATCTATTAGCGGAAGCGAAAAGCAAATA
TGTTGTCCAAGCAACACATTTGGATCCAATTCGTCATTTGAAGAGGATAAAAAGATAAAG
GATAAATGTTCGTATCTGAAAGCTCTACTTCAAGATAAAAAACAACTACAAGCCTTCCCA
GCGGTGTTCATACACGTGGAACGGATCCTCGATGAAGCCCATAGCACAGCTATGAACATC
GTTCCTGTTAACTGTTATGCACCGACGGTGTCGCAACCGTTACATCGTATGACAACAGCA
ATTGCCCCCACTCTACAGACACTAAACGCTGCTAATGCGCAGCTAAATCTTCACAACTCT
ACCGCAAGGGCTAATGGACTCAATGCAGCCAATATCATTGGATCTACACAGACTCTTATG
CAATCAATCCCAAGTGACAGCGATAATAAAACAAAAGAAAGATGCAAGTATTTGCAGCAA
CTTTTAAATGATAGAAAACAATGTCAAAGTTATCCCAGCATCTTCCAACATGTTGAAAGG
TTGCTAGATGAAGATCACCCAGAGTACAACTTTGTTGGAAGAATCCTGGGACCACGCGGA
TTGACAGCAAAGCAACTCGAGCAGGAAGCCAAATGTAAAATCATGGTACGCGGGAAAGGA
TCAATGCGTGATAAGAAAAAGGAAGAAATGAATCGAGGCAAACCGAACTGGGAACATTTG
AATGATGAGCTGCATGTTCTAATAACGGTTGAAGATACTGAAAATCGGGCCAGGTTGAAG
ATGAAGCGTGCTGTGGATGAAGTGAATAAACTATTGGTTCCAGCGGAGGGCGAGGATGAT
CTCAAAAAGAAGCAACTTATGGAGCTTGCCATCATCAACGGAACGTACAGAGATTTTACT
GCACAACCACGATTACAACCTNCACAACATGTACTTTCTATTCCTGGCATGAGATCTCCA
ACTCCTGGGCAGCCTAACACCAATGTGCTTACTACACCTATAATTACCAGGTTACCTAAT
GGGCAGACCGTCATTGCGAACGGTAGTGCCCCGCCACCGCATCCATTGATTGCTCCACCT
GAAGGCGCTTTCTACTATACGACACCATTGGAATATCCCTACACTGGACTGGTAGCAACG
CAAGGCACATCGCTTTTGGAGTACTCTTTTCCAGACCCTACNCTATTAGGTAAAGCGATC
CACATCTAAAAGCATCTCATCAATCATAGTAAAATTTGAGGCTGCCTTTCATGAACAAAC
ATTTTGACTTTGAATGACATTGATTTAGTAGTAATTTTAAGCATTTTCCAAATATACACA
TAAAGTCATGTTACCATTCTTTATATATATACCTCCTATTGCCCAGTTTTTATACCGGCC
TGAACCTTCAATTATTCTATATCTTGAAGCAATGGTGTCAAATCTTGGAAAATTGCATGC
ATATAATTTCCAGTAACTTAAAAAATGTCAATGCAAAAGAGCATGGAGCGACTATGCAAA
AGTAGACTCAACCCTTGCTTGAAGTAACATAAATACTAGACATTGNCCACTTCAGTGTTT
CAATTACGTAGAGGTCGAGTTGCATAAGAAACCATGAAAACCTCACCTGAGTTGGACCGT
TCTACAAAATAACATAATTTATTCGATAACCGTTCGCATGATTTAAAATGAAGCAGAAAA
ATAACATCGAATCGATGAAATCGCTTGAAGAAAGCTTGAAAAATGCTAGAATCAACCCAT
TTATGACACTAGAAATGGACAATTTGGTCACCGATGGTAGCTATAGGCTTCTGTAGGACT
TGTAGCAGTTACACTAAGACACTTAAGACACTAATTTTCTCAATGCCATCATCTACGTAG
ATAATGCGGTGACATTGATATAGATATGGTGATCCTGGATCTACATGATATGTCTGTCTC
ATTCGCCTCTCCAAGTACAGTGGTCACAACTATCACTCGAATGCACTACAAACACCTCAC
TTGCTCGATTTTCCCAGAGCCTTCTGACTCTTGGGGTTGAGCACTAATTTGCTAGACAGC
AAAAATGCAAAGTGTCTTGTATGGCGTTGGGGGTGGGACATATAAATCACGTAAATCTAT
ACAAGCCTACAGGAATGGATTGGAACTCGGTGGGTTTTACANAATAATGACCACTGTACC
ATAGCGACAATGGGACAGTCATNGCAATGTACAGTAGCACANGATTAATATCTTCCAATA
GGCACAACTGTGACTTGATTTGATCACAGATCAGAATCGAAATCAGGTTCTTGTTGCGCT
ATGTAACATTTCCTTATGTTTTAACTCTGTAGACGGTGCCAATTATTTCATAACGATGTA
CAAATATATGTAATCACTCTTTCTTTGCAGACTAACAAAACCTTTGACTCAATTTCAGGC
GCTACACCTGGTGCTAAAATAGTGCGGCAAAGAACTGATACCCGGGTGCACCCCTATCAG
AGGTCCCCAGGTAATGAGTCTTGGGTTAATTAATGAGATATTTTCCTATTAACCATCATT
TATCAGTTTCTAGTAGAGTAGATTTGAAAAGTATTTGAAAGTTTCATTCCAAAGTTTCTA
GATTTTTGTATTTTTGTGAAAGCCAAATGTATTATATTGCACCAAAAACCAACAGCATGG
ACATGAATAGAAATATTTTATTNCATTTTTTGTGTATATTTCATTACATTCTTATTTTTA
TATGAAATGGTTGCCATATGAATTTTTGTCTTCCAAGTTCCCGTTACTATGCTGCCAACA
TTAAGCAATCATTTCAAAAGGATGCAGCAATTATAATAGATGATATCATCAGAAAATATT
TCGTCCCCAATATTGCCAACTTTTTTCTGTAGGCTTTAGTGACCTGCCTTATCGCAGATG
GTGACCCAACAGATTGACTTATTCATCTCCCGTTCCCAGTTCCAAAATTTATGCCGCCGT
ATCAAATTACCCACAACAATTTGTCGGACATTTTCAGCATTTTCTAGATATATCTATACT
AGTGACAAATTTTGGTCTCTAGCTTGTCAAGCACATTTTCGCAATGAGCCCTTGATACAT
ACTCAGCTCCACAAAAGCGACTCGAACTGAAGTATTTGGCTTATAGGGTATGCTGTTTCG
TATGGATGTCTTGCTTGAACATTGGGCCATTATTCTAGATTTGCTACGCTCGTAATTTGA
CGAATTGCCAGTAGTGAGCCTAGATCACAGAAACCTTTTATGACCAAATGTCATCCAAAT
GGAGATTCATGTCAATTCAAAAAGTCTGGGATTAGGATCCTATTTCAGACTGAGTTCTCT
ACCTTTCCAATGCTTGATTTGAAGGCTTTAAACTTCACCTGCCTATAGACCTAGGACATT
GTGATATTGCAAACATCCTAACTTTTACCTCTTCACCGCGGTAAATGACTTTATCAAGTC
GATCGTGGCCATATAGCTGCACTGCCAAATATTATTTCTAAGGCACTTTGACACCAATGG
TACAATCATCATTTCAATGTATTATACCTATCCTATCGTTACAATACTCAAGCCATGTAG
CAGTGGAAATTTTTTTATTGAAATACAAACGGTAACTTGTAAAAAGTGTCATGACGTATC
AAAAGTGAAGAAGGAGCAAGTTGACGTGCGTTTATAATTATGAATGCTGTGAGAAGTTGT
TTTTTAAACTTCATATCACCTCATTGCTTGTGTCACGAAAAATAATATAACTACTTGGTG
TCTTTTGATTGTTCAGTAAGCATGTGCATTTGACTGATTTTGATAGCTTGTTATCATGTT
GATGTTGAAATGAAGTGCTCTCTCATCTTCAATTCTAATACCCATGACTGTACAACCAAA
ACAGTTTTGAAATTGACCGATTGCCAAATTCACGGTGACTCATATTTTGGGGGAGAGGAA
CGTGTGACCTCTAGAAATTTCCTCGTGTCAGAAAAATTTCAACCTTTGACGTACTTTTTT
CGTGCGAACCTTTTACGTAGGCCTTCGCCGCGAATAAAGACGAGTGAGCACTGATTCAAA
TTTTTGTATTTTGACCCTTTAACAATAGTCGATGCGTTGCACAGATCATGATTCGTATTG
GTCATGATATACTGAACCAAAAATTTAGCAGGCCGTGGTGTTAGTCAAATTATAACTCCA
GTTTGGCAATGTGACATAACACTGATTAAAAATAATCAAATATGTTTTCAAAATTGTTGA
GTCCGCATACAGGACGAAATTGCAGATGAAATCATGGATTCAGGATCTGTGCAATCGACC
AATGGTTTATGAAATGCTTGCTACAGTCGATTTTTCACGTTATAACCACAACATTTGTTG
CTTGGTGAATGCTGCAGATTCACTGTTTGCTAGTAGACCAAAATGAAAGTCTAGTTGTAT
TGCTCTACAACAGACGTGGAATCGGGCCGAGTCCGTAGGCCCGAACTCGACCCGAACTAG
ATGCTCGTATGCGAGGCCGATTTAAGCCTTAAAATCTGACCCTGATCAGGACTTGATTGA
GTAACAAATGCTGGAGATGGGTTCAACG

InterProScan

Pfam
STAR_dimer (IPR032377) - T[48-79] 1.3E-10 - T[157-191] 1.7E-13
SMART
KH_dom (IPR004087) - T[182-280] 0.0023
Gene3D
KH_dom_type_1_sf (IPR036612) - T[190-311] 2.8E-55
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[191-304] 4.11E-28
Pfam
KH_dom_type_1 (IPR004088) - T[197-234] 2.2E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KHDR1_HUMAN 41.497 % 103 2.39E-24
KHDR2_HUMAN 46.429 % 104 4.6E-25
QKI_HUMAN 47.003 % 238 1.1E-75