Aniseed - Transcript Card

Transcript 'Boleac.CG.SB_v3.S18....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S18.g03928.01.t

Possible name(s)

CYB5D2; PGRMC1; PGRMC2

Gene model

Boleac.CG.SB_v3.S18.g03928

Location

S18 [69,528 / 71,119]

Sequences

Amino acid sequence

Length: 299

>Boleac.CG.SB_v3.S18.g03928.01.p
MEVKSTLVKVLLGVAIGVLASYYREELDSVKNEVIRLCRSKLTVVSPEAKVPKKHSDSNK
NSKKNAKVGRLFTKDELWEHYRGGDGSKGLHLAIMGRVYDVKKGVXHYGPGGGYSFFAGR
DGTKAFSTGEFNDEGLTDDLSGVEVSHFGEYENWVKFFDKEYKFVGKLVGKFYDSNGDAT
PALKEAKEKMKESQKLKDETEEHNKKFPHCNSEWTQTTGSRVWCSKKSGGIDRDWVGVPR
LLKMVGEDRAYCVCIRNTGPPTLGHTNENTDRGDLDYPYLKEYEECDPNSYSCKVKRHT

Nucleotide sequence

Length: 1,299

>Boleac.CG.SB_v3.S18.g03928.01.t
GGCAATGCTTGCGTACTTCCACGGTTTATTGCCTCGAGCAGTCGGGAAACGTTAAAATTG
TTCAGCCACAGGCACACGGGGCCTATTCGTATTGACGAAACACGACATGGAGGTTAAATC
AACCCTGGTGAAAGTGCTATTAGGTGTGGCGATCGGTGTTCTTGCAAGCTATTACCGTGA
AGAACTAGACTCAGTAAAAAACGAGGTGATTAGGCTGTGTAGAAGTAAGCTGACAGTCGT
CAGTCCCGAGGCGAAGGTACCCAAGAAACACTCGGACAGCAATAAAAATTCAAAGAAAAA
CGCGAAGGTTGGGCGGCTGTTCACAAAAGATGAGCTATGGGAACATTACAGAGGGGGAGA
TGGAAGCAAAGGATTGCACCTTGCAATAATGGGCAGAGTTTACGATGTTAAGAAAGGTGT
CAANCATTATGGACCAGGGGGTGGATACTCATTTTTTGCCGGGAGAGATGGGACCAAGGC
ATTTAGTACAGGTGAATTCAATGATGAGGGATTGACTGACGATTTGTCTGGAGTTGAAGT
TTCCCATTTCGGGGAGTACGAAAACTGGGTGAAATTCTTCGACAAGGAATACAAGTTTGT
TGGCAAACTGGTCGGTAAATTTTACGACAGCAATGGTGATGCAACACCTGCGTTGAAGGA
AGCCAAAGAGAAAATGAAGGAATCACAGAAGCTCAAGGATGAAACTGAAGAACACAACAA
GAAGTTTCCACATTGCAATTCGGAGTGGACCCAAACGACTGGATCTAGAGTTTGGTGCTC
AAAGAAAAGCGGAGGAATAGATAGAGACTGGGTTGGTGTACCACGATTGCTGAAAATGGT
GGGTGAAGACCGAGCTTATTGCGTATGCATACGAAACACCGGTCCTCCGACGTTGGGACA
CACAAATGAAAACACAGATCGTGGAGATCTAGATTATCCATACTTAAAGGAGTATGAGGA
ATGTGATCCCAACTCCTATTCATGCAAGGTGAAACGCCATACTTAGCAATCATATTTATA
AATCATATAATATTATATTTGTTTAAAAACATGACAAAAGCAGTACAGCAGAAGCTAAGC
AATGCCTGAGAAATACAGTACTTTTTCACAATACCTGCACTTTTAGTGGTACTTTTTGAC
TGACTTTAAAACATTCCCTTCGGATAAATAAATGGATTAAGCAGTTTCTGNTTCTCACAA
GCTGNGGCTTTTCTGGGTGTGCAAGACAAGTCGCTAACCAGGTTCAGGTATGCAGCTAAA
CTGAACTCCTCTGCTTTATCAAACTCATGATACTGTGCC

InterProScan

SUPERFAMILY	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[68-169] 3.4E-21
Gene3D	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[69-170] 4.3E-27
SMART	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[72-169] 4.5E-20
Pfam	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[75-136] 3.8E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NEUFC_HUMAN	45.374 %	218	3.66E-70