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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...'
  2. Clone 'cima836902'
  3. Transcript 'Boschl.CG.Botznik201...'
  4. Transcript 'Boleac.CG.SB_v3.S18....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S18.g03942.01.t

Possible name(s)

H1FOO

Location

S18 [161,796 / 164,617]

Sequences

Amino acid sequence

Length: 297

>Boleac.CG.SB_v3.S18.g03942.01.p
MSSSGEESEGLTGENWPEKRVLSMTYEDESSDVEEPEEDSPAENRPSTPPKKAKAPPSRQ
KVPLRLKNPPFIEMIVEAVEDIRDGRKGVTVPAIKASMRSKHSITEASMKTHFKKQLAKA
VENGTLIRPQQYKDSKGLVGRFKINPDYVKAKLKADEKVKXSKESSQKKPTAAKTKKTPQ
RAPTKRRPNASDVNTEKLTSLKETSAAAKAAKEKIKXARKSIGLSNPRKPKAAPKKKTMS
STKKGTSGETRVKSKSADKRTTKTVAPEGGESSKAEKLGKPKPKKTSQKKKKVNEKK

Nucleotide sequence

Length: 946

>Boleac.CG.SB_v3.S18.g03942.01.t
CGCTATGTACGTAGAATAAGCCGCAGACATGAGCAGCTCGGGTGAAGAAAGTGAGGGTTT
AACCGGAGAAAACTGGCCAGAGAAGAGAGTTCTAAGTATGACCTACGAAGATGAATCAAG
CGATGTTGAGGAGCCCGAGGAGGATTCACCGGCTGAAAATCGGCCTTCCACGCCACCGAA
AAAGGCGAAGGCTCCACCTAGCCGACAAAAGGTGCCACTTCGCCTGAAAAATCCGCCTTT
TATTGAAATGATCGTGGAAGCTGTTGAAGATATTCGAGATGGACGGAAAGGTGTCACAGT
TCCGGCTATAAAAGCGAGCATGCGGTCCAAGCACAGCATCACAGAAGCGTCCATGAAAAC
CCATTTCAAAAAGCAACTCGCCAAAGCTGTTGAAAATGGCACTCTGATTCGTCCGCAGCA
ATACAAGGACAGCAAAGGACTTGTCGGTCGATTCAAAATTAACCCAGACTATGTGAAAGC
GAAACTGAAAGCAGATGAAAAGGTCAAAAANAGCAAGGAATCGTCCCAAAAGAAACCCAC
CGCAGCGAAAACGAAAAAAACTCCGCAGCGTGCACCAACAAAACGGCGCCCAAATGCCTC
CGATGTTAATACAGAAAAATTGACTAGCTTGAAAGAGACATCTGCCGCTGCTAAGGCTGC
CAAAGAAAAGATTAAGAANGCGAGGAAGTCTATAGGTCTTTCAAATCCACGAAAACCCAA
AGCTGCTCCAAAGAAAAAGACCATGTCTTCGACCAAGAAAGGGACAAGTGGCGAAACGCG
TGTCAAATCGAAGTCTGCAGACAAGCGAACTACCAAGACCGTTGCGCCTGAAGGCGGCGA
GTCATCTAAAGCGGAAAAGTTGGGAAAACCTAAGCCGAAAAAAACTTCACAAAAAAAGAA
GAAAGTAAATGAAAAGAAATGACGCAACGTTCGCAGCGTTAGAGAG

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[64-151] 9.7E-12
SMART
Histone_H1/H5_H15 (IPR005818) - T[65-132] 5.4E-8
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[67-152] 2.88E-11
ProSiteProfiles
Histone_H1/H5_H15 (IPR005818) - T[67-146] 23.698
Pfam
Histone_H1/H5_H15 (IPR005818) - T[69-145] 1.3E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value