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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.609.v1...'
  2. Transcript 'KH2012:KH.L63.13.v1....'
  3. Transcript 'Boleac.CG.SB_v3.S191...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S191.g04285.01.t

Possible name(s)

VTI1A; VTI1B

Location

S191 [53,473 / 56,123]

Sequences

Amino acid sequence

Length: 218

>Boleac.CG.SB_v3.S191.g04285.01.p
MTTIFASYEEQFETIIAAVSSRLGNVHSSHGVEKKTLISNIERQLDEAQELLEQMVLEVR
ELPNSERAKASSSLKGXQARYSKLETELKKHKMKDSARMREELLEYDDSALTDPRTRLLD
NTERLERSSKRLEAGYKMAVETEKIGQEVLDNLQRDRETITRTRGRLREGDDNLGRSSRI
LSSMTRRIIQNRLISLGIMIVMLIVIIVVIYFIATRHR

Nucleotide sequence

Length: 1,221

>Boleac.CG.SB_v3.S191.g04285.01.t
TTTTCTTCAGCCTTAGTTCTTAATTGATAAGCCTCTGCAAACTCAAGTTTGATTCTTACT
GGCACCTTTAAAATTTAAAAACACCATGACCACAATTTTTGCTTCGTACGAAGAACAGTT
TGAAACTATAATTGCAGCGGTTTCGAGTCGTCTCGGAAACGTTCATTCTTCACATGGAGT
GGAAAAAAAGACTCTCATCAGCAACATAGAAAGGCAACTGGATGAAGCGCAGGAACTTCT
TGAACAAATGGTGCTTGAGGTTCGTGAACTTCCAAACTCGGAACGTGCCAAGGCCTCAAG
CAGTCTGAAAGGTNACCAGGCAAGATATTCAAAGTTAGAGACAGAGCTGAAAAAGCATAA
GATGAAAGATTCTGCACGAATGAGAGAAGAGTTGTTAGAATATGACGACTCTGCCCTGAC
AGATCCGAGAACACGCCTCCTTGACAATACAGAGCGATTAGAGCGGAGCAGTAAGCGATT
AGAAGCTGGATATAAAATGGCGGTAGAAACGGAGAAAATTGGACAAGAAGTCCTTGACAA
TTTACAAAGGGATCGTGAAACGATAACACGAACTAGAGGACGGTTACGTGAAGGAGATGA
CAACCTTGGGAGGAGCTCCAGGATCTTGAGCAGTATGACACGAAGGATTATCCAGAACAG
ACTGATTAGCCTGGGAATCATGATCGTGATGCTAATCGTGATCATAGTCGTCATTTATTT
CATTGCAACCAGACACAGATGAATGGTGATATTTCATCAGGCAATCTCCAATCATAAGGA
AAGGCGGTCTTGTTGCGATTGTGGGATGTATACAATAGTTTGTCCACATGCCTCACAATT
ATGAAACACCATTGCACCTTCTGAACTATCTTCGTTTTGCTTGCTCCACTGTGCTTGTGA
TGTGCACTGAATTGTTATTGGTATGTTCGTGGACATTAGCATCAATTTATAACTACTCAT
GTTTTCAACAACTGGCGGTATGAAGCGATGGCCGACTTGGCGCTTGAGCGTCGCAAATCT
GCGGTCTGCACGCTTTTTTTACATACCGGACCATTATATATCACCGACTATGTGGTAGTG
GAAAGGCTTCATCTCATCTACTAAGTGCAATATCATGAATATTTTTGTTGTTTTTTGGCG
TCATTTCATGCTTCGTTCAAAGCGGATTGTCACGTTATAAAAACTGCTGCAGGAATGTTG
TCTTTCACAAATATATCATCC

InterProScan

Gene3D
v-SNARE_N_sf (IPR038407) - T[2-100] 3.9E-24
PIRSF
GOSR2/Membrin/Bos1 (IPR027027) - T[2-214] 7.6E-12
SUPERFAMILY
SNARE (IPR010989) - T[7-91] 2.28E-18
Pfam
Vesicle_trsprt_v-SNARE_N (IPR007705) - T[12-90] 1.5E-18
SMART
T_SNARE_dom (IPR000727) - T[117-184] 9.2E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VTI1A_HUMAN 49.309 % 204 1.11E-66