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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  2. Transcript 'KH2012:KH.C10.73.v3....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'Boleac.CG.SB_v3.S193...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S193.g04336.01.t

Possible name(s)

DLG4; GRIP1; GRIP2

Gene model

Boleac.CG.SB_v3.S193.g04336

Location

S193 [100,322 / 117,693]

Sequences

Amino acid sequence

Length: 1,085

>Boleac.CG.SB_v3.S193.g04336.01.p
LCAFVISVQMFEIPQISEQIKSSSGRYSQGQNEKGISTVLLQKADGVGMGLTVSGGLDKG
DRPKISNLRLSGIAAMSDRLQTGDYIASVNGIKTGRMKHAEIISLLKNVGQSVSLEIEYQ
LPPTNVATPTIAQKTIDITLTKEDNGFGIILRGGHNEDNTKTRSLVVTHVRPGSAAEKDG
TIKTGDRLKCINGIHLFEATLDDVYDMIKGAQDTATFTIEYDVSVMDAVNNASGPLLVEX
SXTPGSNLGLVLTVSLRRKKRVICIDKILPASIADRCGALRVGDQLLSIDGVSXDANNTS
VEDASKMLQSNSDHVRIEILPMSQLAIEAPKNMNFRSRYAPTITSAQSLSALNHFPRHPR
SHRSLATTTRGSTSTWQRRRMHRPKYAASAISLASVDLRSGNQVVHAESVEICLLSADDN
CPIGSTASQYFGIQLQGGVFATEVLTSPPAIAYIEHDSAAERCGRIQVGDRLVSINNCPT
ENETLDEVKGMLSDAMDNGQVYLEIEFDVAESVVPSSGTFHVKLPKKRDIDLGIIVGRTA
SPTEPLLITDILPGSIAHRTGTIEAGDKLLSIDGVRLDRNSSVEHAIALLRNAEDVVRLK
IKKDEENSDDAETSGAITFTVELKRYGGPLGITISGTEDALDPIIISIEFKSRTGAIHEG
DQILSINNIPLRTKAVSEAIRLLQSAGEIVTLKIRKQPFLDRPIQSNPIPTRPMRASSLQ
RSSLXTEPITEIIDHEAETCDLHHTETAHDTEGSAATXPSYPEPNTSRDAEVIDRVAPAG
APSVDSAVGSLDRTVGSDGKKNSLIINPPVAQAHSTPNSSSQPPPEPAKNLDVPRRIDTL
RAKFEREKSPQRYTANRNSHRPDDDKPARNFAWMERNEDFTEVERDNVTNSAGVDWQNAL
HDLQSVGQSTDFMRDFEASIMNTGQLDIADDGFRQRHQRVPSYPRSMNMHTRQTAQSYVS
NPTVQLHKITLQKSSDAEDFGFSLSDGQLERGVYVHSTRSNGPADRAGIRPYDRLLQVNG
IRTRDFDCCQAIPLIAQSGRRIVLVIARHPHNTGMAFPSHQAPLLAPPMNVPSANVMRSG
AFETL

Nucleotide sequence

Length: 3,785

>Boleac.CG.SB_v3.S193.g04336.01.t
TTATGTGCATTTGTCATCTCTGTGCAAATGTTTGAAATTCCGCAAATATCTGAACAAATA
AAGTCATCGTCTGGCAGATATAGCCAGGGACAAAATGAGAAAGGAATTTCGACTGTTTTG
TTGCAAAAAGCTGATGGAGTTGGGATGGGATTAACCGTTTCAGGTGGATTGGATAAAGGC
GATCGACCAAAAATATCAAATCTCAGACTTTCTGGAATAGCAGCAATGAGTGACCGACTT
CAAACAGGAGATTACATAGCATCTGTGAATGGGATTAAAACAGGAAGAATGAAACATGCG
GAAATCATCAGCTTGTTAAAAAACGTTGGACAATCTGTATCGCTTGAAATTGAGTATCAA
TTACCTCCGACAAATGTCGCAACTCCAACGATTGCCCAAAAGACGATCGACATTACATTA
ACAAAGGAAGATAATGGTTTCGGTATTATATTGAGAGGAGGGCATAATGAAGACAACACC
AAAACAAGATCACTTGTAGTCACACATGTACGGCCTGGAAGTGCAGCTGAAAAGGATGGA
ACTATTAAGACTGGTGATCGACTGAAGTGTATAAACGGAATTCATTTGTTTGAGGCTACT
TTAGATGATGTTTATGATATGATTAAAGGTGCACAAGACACGGCAACGTTTACAATTGAA
TATGATGTCTCAGTCATGGATGCAGTCAACAATGCGTCAGGACCGTTGCTTGTTGAGATN
TCTAANACCCCCGGTAGCAATCTTGGCCTTGTACTCACAGTTTCTTTACGGCGAAAGAAA
CGTGTTATTTGCATTGACAAAATACTTCCTGCTAGCATTGCTGACAGATGCGGGGCTTTG
CGTGTTGGTGATCAATTACTCTCTATTGATGGTGTTAGCTTNGATGCTAACAACACATCT
GTTGAAGATGCGAGTAAAATGCTTCAGTCAAACTCGGATCATGTTCGTATTGAAATACTT
CCCATGTCACAACTTGCCATAGAAGCACCAAAAAATATGAATTTTCGCTCAAGATATGCG
CCGACGATCACGAGTGCTCAGTCACTGTCAGCTTTAAATCATTTTCCACGCCATCCACGT
TCACATAGATCACTAGCCACAACCACTAGAGGCAGCACAAGCACTTGGCAAAGAAGGAGG
ATGCATCGACCAAAATATGCCGCCAGCGCCATTTCACTTGCATCAGTTGACTTACGTAGC
GGAAATCAAGTCGTACATGCCGAAAGTGTTGAGATTTGTTTGCTGTCTGCCGATGACAAT
TGTCCGATTGGAAGTACTGCCAGCCAATACTTTGGAATACAACTCCAAGGAGGCGTATTT
GCTACAGAGGTCTTGACATCGCCTCCTGCGATTGCCTACATCGAACATGACAGTGCTGCT
GAAAGATGTGGACGCATCCAAGTTGGTGATAGATTAGTTTCTATCAATAACTGCCCGACT
GAGAATGAGACACTGGATGAGGTGAAAGGAATGCTTTCAGACGCAATGGATAATGGACAG
GTCTATCTGGAAATTGAATTTGATGTCGCTGAATCAGTCGTCCCAAGCAGCGGAACGTTT
CATGTAAAGTTGCCGAAGAAAAGAGATATAGATTTGGGTATTATTGTTGGAAGAACTGCC
TCACCTACTGAGCCACTTCTTATTACGGATATCTTACCTGGATCCATAGCACATCGCACT
GGAACTATAGAGGCTGGAGATAAATTACTTTCAATTGACGGAGTTCGACTTGATAGAAAT
TCTTCGGTTGAACATGCAATAGCATTGTTGCGGAATGCAGAAGATGTTGTCAGATTAAAG
ATTAAGAAAGATGAAGAAAATTCCGATGACGCAGAAACATCAGGTGCCATCACTTTTACT
GTCGAACTGAAGAGGTATGGAGGACCATTAGGAATTACAATCTCAGGAACTGAAGATGCA
CTTGATCCTATCATCATATCTATAGAATTCAAGTCCAGGACTGGTGCCATTCACGAAGGC
GATCAAATTTTGAGTATTAACAATATACCNTTGCGAACAAAGGCAGTGAGCGAAGCAATC
CGATTGTTACAAAGTGCCGGAGAAATTGTGACTTTGAAAATACGCAAACAACCTTTCTTA
GATCGACCGATCCAATCAAACCCAATACCTACACGTCCAATGAGAGCAAGCTCGTTACAA
AGAAGTAGCCTANTAACCGAGCCTATTACAGAAATTATCGATCATGAGGCTGAAACATGC
GATTTGCATCATACCGAAACTGCTCATGATACTGAGGGTTCTGCAGCTACCNACCCATCA
TATCCAGAGCCAAATACCAGCAGGGATGCTGAAGTAATTGACAGAGTTGCTCCNGCTGGC
GCTCCAAGTGTGGATAGTGCTGTCGGCTCTTTGGATAGGACAGTAGGTTCTGACGGAAAA
AAGAACTCTTTGATTATTAATCCACCTGTGGCACAAGCTCATTCTACACCTAACTCATCA
TCGCAACCTCCACCAGAACCTGCGAAAAACTTGGATGTTCCAAGAAGAATTGACACTCTT
CGAGCAAAATTCGAGAGAGAAAAGTCACCACAGAGGTACACGGCGAACAGAAACTCGCAC
AGACCTGACGATGACAAACCAGCAAGAAATTTTGCATGGATGGAGAGAAATGAGGACTTT
ACAGAAGTTGAACGTGATAATGTAACAAATTCGGCTGGTGTTGATTGGCAGAACGCACTC
CATGATTTGCAATCTGTTGGACAATCTACTGATTTCATGAGAGATTTTGAGGCGTCAATC
ATGAATACCGGACAGTTGGACATAGCTGATGATGGATTTAGACAGCGCCATCAACGTGTT
CCGAGTTATCCACGATCTATGAATATGCACACACGCCAAACTGCACAATCCTACGTGTCG
AATCCTACCGTTCAATTGCATAAGATCACGTTGCAAAAAAGTTCAGATGCGGAAGACTTT
GGATTTTCTCTTTCCGACGGCCAGTTGGAACGTGGTGTGTATGTCCACTCCACAAGAAGT
AACGGACCAGCTGACAGAGCTGGGATCAGACCATATGATAGACTTCTTCAGGTCAATGGT
ATCAGAACCCGAGATTTTGACTGCTGCCAAGCTATACCTCTCATCGCACAATCAGGAAGA
CGTATTGTGTTAGTTATCGCCAGGCACCCTCATAATACGGGAATGGCATTTCCATCTCAT
CAAGCACCTCTTCTTGCCCCACCAATGAACGTTCCCAGTGCGAATGTCATGAGGTCTGGG
GCNTTTGAGACATTATAGATTAAGAATTGATAGATCTAGGAAATTTCAATGCCGATATTT
GCCACGATGGTGTAGTAATAGCTCATTGTAAACTGGAAGGATTTAGGTAATATATCATCA
TTGCTGGTTTTGTTATTCTTATGATAANAAATCATTTTAATACATTTTATTCGTATTGGT
ACTTATTGCNAACGGTGCTCAAATTTTCGTATATGTTGCGACAGTATTTGACTTCTTGAC
AATGTATGGAAGCATGAAATGGTGCGATGAATATTTGTCGCCTCACATCTTCTTTGCCTN
TTTTTTGTACTCTTCATGAAATGNTGCTAGCATCTGAATATTTATTCGTGTACGTACATT
TTAATAACACCCACTTCACACCATTATTGACAATAAATACTACCAAATGCTGCTATGGCG
GATCTCTCTCAAATTGCTTCGTTCTGCATTGGGCACCAAGCTTTCAAATCATACATCGTT
GCCTCAGAGGGGAGTGCCCAATCTCATAGTCGCTTTCAAAGCCACGCGTTGTGTCATCGT
CTGTG

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[25-123] 6.97E-17 - T[121-224] 5.92E-21 - T[222-321] 1.84E-14 - T[428-506] 2.5E-15 - T[506-607] 5.52E-16 - T[614-698] 2.37E-14 - T[943-1053] 2.76E-20
PANTHER
GRIP2 (IPR030029) - T[26-332] 4.5E-272 - T[362-1053] 4.5E-272
ProSiteProfiles
PDZ (IPR001478) - T[38-121] 16.245 - T[137-223] 17.41 - T[237-323] 15.441 - T[411-495] 11.119 - T[521-605] 17.31 - T[620-698] 14.094 - T[968-1050] 16.627
Pfam
PDZ (IPR001478) - T[40-118] 9.9E-8 - T[138-219] 1.1E-11 - T[249-320] 6.9E-8 - T[429-505] 2.2E-7 - T[526-602] 2.4E-10 - T[621-695] 4.0E-8 - T[969-1046] 1.9E-8
SMART
PDZ (IPR001478) - T[47-121] 7.6E-10 - T[145-223] 5.1E-16 - T[246-323] 2.4E-10 - T[429-509] 1.4E-12 - T[530-605] 1.9E-12 - T[628-698] 9.9E-11 - T[978-1050] 3.7E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GRIP1_HUMAN 42.389 % 754 0
GRIP2_HUMAN 43.414 % 742 0