- Transcript 'KH2012:KH.C1.279.v1....' >
- Molecular Tool 'Mesp>Ets1/2-VP16 (Davidson 2006)' >
- Transcript 'Boleac.CG.SB_v3.S197...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S197.g04440.01.t
Possible name(s)
CRIM1; FRAS1; SPON1
Gene model
Location
S197 [23,676 / 31,272]
Amino acid sequence
Length: 588
>Boleac.CG.SB_v3.S197.g04440.01.p
MYRYAAIFLFAHAVFANRLLGSEDDLMSPDMILPSEGVGQFVQPDVTNLDSDSVGARERD
DIDAGDLEPLHKKKPRRTNLQRIKNHRSRHGANSKETAVKVVNIRSIQWKSDSFTKVDRC
RRGLSRPNWNETNCISCKCKSHQVHCXRPKCIELDCIDQIEVEGECCPKCPEKLCETPDG
RRFKDGQEWHMDDCTFCHCSKGKVECSVEDCQVPTCKNPSKVPGRCCPICLDTSCNAANG
TSITAEAVWKEGSCTHCYCNDGDKNCDEERCPYINCTDKHTPEGRCCERCDHGVIDCQVS
EWGSWSECAIQECGGGMARRFRTVVVPHQNGGNFCPHMSEARMCPRLPCDVLPVCPVTEW
TKWGPCTATCGSGRQMRTRQRAKATGAPMTSLIDCTTTHFEETKQCELGSCSDTLVSDHR
EALVHDDICYQVTWSEWSPCFCDSGTQQRTQVLLNQSHPRGHLCRLLNEVRICECDPNRA
GVTRCQVSPWGSWTPCSKRCGPGGTRTKRRRVLQEPSGGAQCPKLSISRPCKTKTCARSS
ETLSLSGNFCFTPDGDIKNHGDEWTEGLCASCRCDNXQILCQTTTCEH
Nucleotide sequence
Length: 2,938
>Boleac.CG.SB_v3.S197.g04440.01.t
TTACAGAGATAGGCAAGTATGTATAGATACGCTGCGATTTTTCTGTTCGCCCATGCTGTT
TTCGCCAATCGGCTACTCGGCAGCGAAGATGACCTCATGTCTCCGGACATGATCTTACCA
AGCGAAGGAGTTGGACAATTCGTGCAACCGGATGTAACGAACTTGGATTCTGATTCTGTT
GGAGCACGAGAACGNGACGATATTGATGCGGGTGATTTGGAACCACTGCATAAGAAAAAA
CCAAGACGAACAAACTTACAAAGGATTAAAAACCATAGGTCAAGACATGGAGCAAATTCA
AAGGAAACTGCTGTCAAAGTTGTGAATATAAGATCAATTCAATGGAAGTCAGATTCTTTT
ACTAAAGTTGACAGATGTCGTCGCGGCTTGAGTCGTCCTAACTGGAACGAAACAAACTGC
ATATCTTGCAAATGCAAATCGCACCAGGTGCATTGTCANAGACCGAAATGTATTGAACTG
GATTGCATTGACCAAATCGAAGTGGAGGGAGAATGTTGTCCGAAGTGTCCAGAAAAACTT
TGCGAGACTCCAGACGGTCGCCGATTCAAAGACGGCCAGGAATGGCACATGGACGATTGC
ACATTTTGCCACTGCTCGAAAGGGAAGGTAGAGTGTTCAGTAGAAGATTGTCAGGTTCCT
ACTTGCAAGAATCCAAGCAAAGTGCCTGGNCGATGCTGTCCTATTTGCCTCGACACTTCT
TGTAACGCCGCGAATGGGACGTCTATAACTGCTGAAGCAGTATGGAAAGAAGGTTCTTGC
ACGCACTGCTATTGTAATGATGGTGACAAGAATTGTGATGAAGAACGATGCCCGTATATA
AATTGCACAGACAAACATACCCCTGAGGGACGTTGTTGCGAGAGATGTGATCACGGTGTG
ATAGATTGTCAGGTATCAGAATGGGGATCATGGAGCGAATGTGCCATTCAGGAATGCGGA
GGAGGAATGGCAAGGAGGTTCAGAACAGTCGTGGTTCCGCATCAAAACGGAGGAAATTTT
TGTCCTCATATGAGTGAGGCGAGAATGTGTCCGAGACTTCCATGTGATGTATTACCTGTG
TGCCCTGTGACGGAATGGACCAAATGGGGTCCTTGTACTGCTACCTGTGGAAGTGGGAGA
CAGATGAGAACTCGTCAGAGAGCAAAAGCAACAGGCGCNCCAATGACATCGTTGATTGAT
TGTACCACAACTCATTTTGAAGAAACAAAGCAGTGTGAACTCGGGTCGTGCTCAGACACT
TTGGTGTCAGACCACAGGGAAGCATTGGTGCATGACGACATCTGTTATCAAGTGACGTGG
TCAGAATGGAGTCCCTGTTTTTGTGATTCGGGCACTCAACAAAGAACCCAAGTTCTTTTA
AATCAATCTCATCCGCGTGGTCATCTGTGCCGTCTTTTGAATGAAGTGCGAATTTGTGAA
TGTGATCCAAACAGGGCCGGAGTTACAAGATGCCAAGTTTCGCCATGGGGTAGTTGGACT
CCTTGTTCCAAAAGATGTGGACCTGGAGGCACACGAACTAAGCGACGACGAGTATTACAG
GAACCATCGGGCGGGGCACAGTGTCCAAAACTGTCAATTTCAAGACCATGTAAAACCAAA
ACATGTGCACGATCAAGCGAAACCCTATCCTTAAGCGGAAACTTTTGCTTCACGCCTGAC
GGTGATATCAAAAACCATGGAGACGAATGGACGGAAGGTTTATGCGCATCATGTCGATGC
GACAATNCGCAGATTCTTTGCCAGACCACAACATGCGAACACTGAATTTGTCAACGTCAC
AGGATGTTACATCAGTACCGTAACAAAGAGTTGCAATTAGTGTTCAGTGCCGCTTGGATT
ATTCTGTTGAATGTCGCTTGCATTCAAACACGTTTTGAAACTCAAAATATGTTTGTGTAA
AATCTAGTTTCAATGATTTTGGATTGTCTTGTTTGCTAAAACTTGATTCATCATAATTCC
AACTTGATGAAATACCATAAATTATCGTTGTCAGTATTCAAATCTTGCAAGAACGATGCG
TAGATTTTCCTTGAGAACAAAGCTAAATTTTATATGTTATAAGCAATCGACATGATGGTA
TAAGTGCTTCAAAAGGATTGATGTGTTTTGAAATCATCGCCTGCGGCTACATTACTTCTG
TCGGTCGTTCAAGAAAATTCATTTAGAANATGGAACATTTAACACAATTTTGAAATATCA
TCAAAAATTATATCCGACAAGAAATACGTCTTAGATTGTAACGTTGAGTTTGTGTTCGCT
ATTTATTTCTTTGCGCTTATTGCTTTTCCGATCAGTCTGATTTTCCTTTTTGTGTTTCAA
TTTTGCATTGTCATTTTATTTTTGCAAGTAAAATTTTGAAATGAAGATAATATAAATTAA
GGGCACTGTAAAGTGATTTCACACTAAAAATTCATCGTCAATTTTGCTATTGAAATTGAT
AAGACATCAAAATGGTACGCTTTTGTGTCTGTTTGAAGTGAAATGTTCAATCAGTTTCTA
GAATATCAACTGCGTTGTAAGTATAGAAAGTTTGCAATTGAAACTTGAAAACAGTCGATA
TGAGGCATGACAATCTAATTGTGGACACAGCATCGACACCTAACGAGATCCTGCCGCCTT
GGACATCACAGAACGGCAATTTTTTACCGTTGTGGTGTTGCGTTTACGGACAACGGTCCA
GGCAACAGAGGGCTCTAAAAAGGCATCCATGCTACGCATCGCCTGGCGTCATGTTCCATT
AGCCAATTTCATACATAAGAAGCAATTGATATCTCACTAAACACGAGGCCGAATTACTTC
AACTGAACGTCTTCCATTCATTGTCGATACTTCACCAATTTCAATTTGATGAAATTTGTT
GTGTAAAAAGTGTTGTAGTGCTTTGACGCAATTCCGAATACACCGAAAAATTGCGAAA
| SMART |
VWF_dom (IPR001007) - T[117-170] 2.9 - T[175-230] 4.7E-10 - T[235-290] 0.01 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[173-231] 10.854 - T[233-291] 10.044 |
| Pfam |
VWF_dom (IPR001007) - T[179-230] 3.0E-9 - T[238-290] 2.6E-6 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[194-230] . - T[254-290] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[295-344] 3.3E-13 - T[354-411] 4.8E-9 - T[428-473] 6.2E-6 - T[482-531] 3.2E-11 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[295-344] 1.44E-9 - T[355-411] 1.44E-8 - T[483-536] 9.02E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[296-350] 10.326 - T[354-412] 10.428 - T[427-476] 8.423 - T[484-537] 11.222 |
| SMART |
TSP1_rpt (IPR000884) - T[299-350] 4.7E-9 - T[357-412] 2.7E-10 - T[432-479] 0.52 - T[487-537] 1.1E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[300-349] 6.1E-7 - T[359-408] 3.8E-6 - T[434-475] 0.0018 - T[488-536] 4.6E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FRAS1_HUMAN | 33.526 % | 81.6 | 6.71E-16 |