- Transcript 'Boleac.CG.SB_v3.S19....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S19.g04218.01.t
Possible name(s)
ALYREF; POLDIP3; RBM8A
Gene model
Location
S19 [287,175 / 291,252]
Amino acid sequence
Length: 418
>Boleac.CG.SB_v3.S19.g04218.01.p
MGVEDLSLDDIIKKNKGDMYSDRIKSNPGFKAKRXQMRGGGAVGRGXSMRQIKDARLLIT
TKSKAKIGDARQKISAKRVTDARHKLQAKRTLXSFNTQSDGKIPKVTISNDIAKKAAFSR
SDIEFHITDXQRSKATXGRKFLGATGXSSAAGXQIAVRNERARRLSPKMENKTFERLQIT
TINREAMKRKPPARQSRERRDSVSPRPSRPIKKRAMVDSDSEFEEFMKFRKQHRRHDVEE
METEATTARADRQAESIDLRPMISRQMSPKREEMEQEPPPMGPSPIEGTKLRVYNLHPVV
SEDDILELFSVIGPVRRARLIKPGEAEVVYIRHENALTAYKKYNSRDLDGQPMQIKIVKG
TDENQKVMYSWMKEXKSSKKKSDIGEVTELHNGVLQQALFKGGSTGTSTRPVVFTVKI
Nucleotide sequence
Length: 2,041
>Boleac.CG.SB_v3.S19.g04218.01.t
GGCTTTCAGCTGTACGTCGGTAATTGTAGTTCTTAGCGCCAGAAATTGACGTGTGTCAGA
TTGTGTGTGTGGACTTNCGAGATCGCGAGGATATGGGAGTAGAAGATCTTTCCCTGGACG
ATATAATCAAAAAGAATAAAGGAGACATGTACAGTGATCGAATAAAATCGAACCCGGGTT
TCAAAGCGAAACGTCANCAAATGAGAGGGGGTGGCGCAGTTGGAAGAGGCCNTTCAATGC
GACAAATCAAAGACGCTAGGCTTTTAATAACAACNAAATCAAAAGCGAAGATCGGAGATG
CACGTCAGAAAATTTCCGCAAAACGTGTCACTGATGCACGGCACAAGTTACAAGCAAAAA
GAACTCTANATTCTTTCAATACTCAATCTGACGGAAAGATTCCGAAAGTTACCATTTCTA
ATGATATTGCGAAAAAGGCAGCCTTCAGCAGATCGGATATCGAATTTCATATCACTGACA
GNCAAAGATCAAAAGCCACGCNTGGNCGAAAATTTTTAGGNGCAACTGGTAGNAGTTCTG
CNGCNGGANTACAAATTGCTGTCAGAAATGAAAGAGCNCGTAGGCTGTCCCCTAAAATGG
AAAACAAAACTTTTGAAAGATTGCAGATTACTACAATAAATAGAGAAGCAATGAAAAGGA
AGCCCCCAGCTCGGCAATCCAGAGAAAGAAGAGATTCTGTTTCTCCAAGGCCGTCAAGAC
CTATAAAGAAGCGTGCCATGGTCGATTCTGACTCAGAGTTTGAAGAATTCATGAAATTTC
GTAAGCAGCATCGAAGACACGATGTTGAAGAAATGGAAACGGAAGCGACTACGGCACGAG
CGGACAGACAAGCAGAATCAATTGATCTGCGACCGATGATATCAAGGCAAATGTCACCAA
AGCGAGAAGAGATGGAGCAGGAACCTCCGCCGATGGGGCCAAGTCCAATTGAAGGAACTA
AATTAAGAGTATATAATCTTCATCCTGTGGTATCAGAGGATGATATCTTGGAACTATTCA
GTGTGATTGGTCCTGTACGCCGAGCGCGACTTATAAAGCCAGGGGAAGCTGAAGTCGTGT
ATATTCGTCATGAGAATGCGTTGACTGCCTACAAAAAGTATAACAGTAGGGATCTTGATG
GTCAGCCGATGCAAATAAAGATTGTTAAAGGAACAGACGAGAATCAAAAAGTCATGTACA
GTTGGATGAAAGAGATNAAAAGTTCAAAAAAGAAAAGCGACATCGGTGAAGTAACTGAAC
TGCACAACGGAGTCCTACAGCAAGCTCTATTCAAAGGGGGAAGCACTGGAACGTCCACAC
GACCTGTGGTTTTTACGGTCAAAATATGAAGCTTAGATGATACCCAAGATTGTGAACCGC
AGCAACATGTACTTTACCCAAGATTTTGAACTACAACTTGACCCGCTACTTCTGCGTGAA
GCTGCCAGAATATCGAACTCCTTCAACAAAGAAGCNAACTCAATTGAACTAATACTTCAA
ACCAACACACCCATTTAGTCCAGTGGTTGAATTCATTGAAACACCATGGCACGGGAAACT
CTTGCCCAAAAAACCTGTTAGGCCTATTGAAGTGTCAAGTGTATATCGTGCATACGTCGG
TGATAGCATTGAATTTAGCGATTCCGCTAGTTACTATGGTTTTTTAGAATGACCTCTTCT
TTGGATATTTGTTTGATATGTGGTATATCTGGAGGTCTTCTTTGTGGTTGAATTGTTATC
NTTTGTATGGAGATAACGGCTGATGCCTATTGCGGAAGGCTAAACTCATGTGGGTCATAG
GGTCTTTGTAGATTGCATAGCTTTGGTATGATTCGATCAATNTCACTATTTGTAGTGGAT
TCTGTGAATGCTATTGAAGCAAATCTATATGACATGACAAACTGCAATCTCCCGTATTGA
AAATATCGTGCTTACGGCTGTTGTATCCTAAAAATTCTTATATTCTNATTCTGAGATCTT
GTCTGACGTCATCCGATTTGAGCAATGTTTTGAGAAGCCTTCAATACAACTTACTGACAA
A
| PANTHER |
PDIP3 (IPR034785) - T[5-368] 7.7E-48 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[158-368] 6.6E-14 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[263-368] 1.17E-16 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[289-360] 11.725 |
| CDD |
PDIP3_RRM (IPR034784) - T[289-357] 1.28988E-34 |
| SMART |
RRM_dom (IPR000504) - T[290-356] 3.6E-11 |
| Pfam |
RRM_dom (IPR000504) - T[291-353] 6.3E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PDIP3_HUMAN | 39.877 % | 118 | 2.14E-29 |