Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S19.g04230.01.t

Possible name(s)

VPS72

Gene model

Boleac.CG.SB_v3.S19.g04230

Location

S19 [351,505 / 352,450]

Sequences

Amino acid sequence

Length: 314

>Boleac.CG.SB_v3.S19.g04230.01.p
MAASREPRRTAGNRMSKVLEEEXDEDDFYKTTYGGFNEKEGDNDFDAEKEDSAXEVDSDF
DVSEQEGEIVSDQDEETIKREEKKKKRAAVSSKAYKEPKKAKKDEETDSGAQPPKKEKKV
EIKNTDKQPSTSTATQDGPSRKSSRRATAANSYLIGMKVKERQXADQKKKVAVKKSMVGV
RRLTQEELMQEAERTERKNLKSLHHYQRLEASRKKISSKKRTFSEPTVKYFSTSMPDPEH
GGKISRNFIVFSEESVMKQEFHWKKAPKISKLICPVTNKPAKYIDPLTSLPYYDIEAFRL
IRQAYALSKKEKTK

Nucleotide sequence

Length: 945

>Boleac.CG.SB_v3.S19.g04230.01.t
ATGGCAGCAAGCAGAGAACCTCGAAGAACAGCTGGAAATCGCATGTCGAAGGTGCTGGAG
GAGGAATTNGATGAAGATGATTTTTACAAAACTACTTACGGAGGATTTAACGAAAAAGAA
GGAGATAACGACTTTGATGCAGAAAAAGAAGATTCTGCTGANGAAGTAGATTCCGATTTT
GATGTTTCAGAACAAGAAGGTGAAATTGTCAGTGATCAAGATGAGGAGACAATTAAACGG
GAGGAAAAAAAGAAAAAACGAGCGGCGGTATCATCAAAAGCATACAAAGAACCTAAAAAA
GCGAAGAAAGATGAAGAAACAGACTCTGGTGCCCAACCGCCTAAAAAGGAGAAAAAAGTT
GAAATTAAAAACACTGACAAACAGCCGTCTACTTCAACTGCGACTCAAGATGGTCCAAGT
CGAAAATCAAGTCGTCGTGCAACTGCCGCTAATTCATATTTAATCGGCATGAAAGTCAAA
GAAAGACAATTNGCTGACCAAAAGAAAAAAGTTGCTGTAAAAAAATCAATGGTTGGAGTT
CGCCGGCTTACCCAGGAAGAACTGATGCAAGAAGCAGAGCGTACCGAACGTAAAAATCTC
AAATCGTTGCATCATTACCAACGTCTAGAAGCCAGTAGGAAGAAAATCAGTTCAAAGAAA
CGCACTTTTTCCGAGCCTACAGTCAAATACTTCTCAACATCGATGCCAGATCCGGAACAC
GGAGGAAAAATTTCAAGAAATTTTATTGTTTTCTCAGAAGAATCAGTCATGAAGCAGGAA
TTTCATTGGAAAAAAGCACCAAAAATTTCAAAACTGATATGCCCCGTTACAAATAAACCG
GCAAAATATATTGACCCGTTAACAAGCCTCCCATATTATGATATAGAAGCATTTAGACTT
ATTCGGCAAGCTTATGCACTGTCAAAAAAAGAGAAAACAAAATGA

InterProScan

PANTHER	Vps72/YL1 (IPR008895) - T[4-311] 2.5E-75
Pfam	Vps72/YL1 (IPR008895) - T[5-232] 1.7E-40
SMART	Vps72/YL1_C (IPR013272) - T[272-301] 3.5E-12
Pfam	Vps72/YL1_C (IPR013272) - T[273-301] 2.5E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VPS72_HUMAN	36.705 %	181	1.18E-54