- Clone 'AHC0AAA134YG12' >
- Clone 'cien60278' >
- Transcript 'Boleac.CG.SB_v3.S206...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S206.g04784.01.t
Possible name(s)
ALK; LTK; ROS1
Gene model
Location
S206 [42,092 / 66,773]
Amino acid sequence
Length: 952
>Boleac.CG.SB_v3.S206.g04784.01.p
MXXIHGPKKHSQQXMXNSWFTGYCSILIGIXLGMFPKAFAKNMSDSEVSIGQNVDMSDVS
FFFVKFSECWKHPICQEIGVISSATARLRNGRNVFRVAFGINGSSCNCTKIFKGTYSRAG
CYLPRFTPPSGVPIKISSVAASYNVSNVIGWKEDWLGSYLCRNILNPSVKYGFFFVKLRH
SNITISPNLHGDSFMYQPISFTSSRCRVKLNGLQPNSVYQIYITVTMESGKQKSLMISKS
SKLTTSCEEPSPPKHLKCSSVNSTALLLSWNDSNNTNQVFYEVLWSKTGSDRTYSFVNTS
ESGSYLHNGLQYHNYTYMSLRSSYWHSSKLLKISGSFTYTITDLKCNTGYKIRTSQQYAG
HSGVEGWSSSAPIVRKTKPGTPNFPHNVTVLLNGILSWSKANGNGSPLLGYXIWCRNESS
QPLFFSYGAWQKLVTLYNVESLSWEIRNLPTNLXYQFRVSAINKVGEGDRSDTSNIYFYQ
SENSTGDSSEIIGVIAGVVAFVVSLLVAILVWCCRSRRSGTSVMDKPSSVSFADESIRHL
EKPHPAMPSNLETCDSSKSSNLEPPSNLPLLSSENLELLEFLGKGAFGEVYEGIAYDIGE
EPGISTRVAVKVLREQSDGKKEFLMEAPKLSAVDXIDICLDIAAGCKYLEEHHFIHRDLA
ARNCLVSTKDYLAQDKVVKIGDFGLARDLYRSEYYHKHGDGLLPVRWMAPESLEQNIYTT
QSDVWSFGILLWEVMSYGKRPYQILNDIEILQFIKTGGRLEKPDHCPDPIYLLMTKCWLS
SPXFRPSFAWALEYLHNVKDACNGFCDSDSDVLPGAYGTASTSDEDFADEGIRTSRSPSP
DSIAHSNLAFEADDEDLQSVHSLVLQEVEIQVHHSGDDSEVADATHCKELFASFSDIEDD
TLVIENIGATSSLPISPTSSRLLPYIGDLPITDEERLLRKKQWNQQSNSTKE
Nucleotide sequence
Length: 4,234
>Boleac.CG.SB_v3.S206.g04784.01.t
TCAGAAGTCTGCTGGACGAAGATACTGTGAAGAGATGAATGANTGANATTCATGGACCAA
AAAAACATTCCCAGCAANCAATGNTCAATTCCTGGTTTACAGGTTATTGCTCAATACTGA
TTGGAATAAANCTGGGGATGTTTCCAAAAGCCTTTGCTAAGAATATGTCTGATTCTGAAG
TATCAATAGGTCAGAATGTTGATATGTCAGATGTTTCATTCTTCTTCGTTAAATTCTCTG
AATGTTGGAAACATCCCATCTGTCAGGAGATTGGGGTAATATCCAGTGCTACAGCACGAC
TGCGAAATGGAAGAAATGTTTTCAGAGTTGCTTTTGGAATTAATGGATCTAGTTGTAATT
GCACCAAAATCTTCAAAGGAACCTACTCAAGGGCTGGATGTTATCTTCCACGGTTTACTC
CACCTTCTGGTGTTCCAATAAAGATATCCTCTGTTGCGGCTAGTTATAATGTCTCCAATG
TGATCGGATGGAAAGAAGACTGGCTTGGCTCTTATCTTTGCCGAAATATTTTAAACCCTT
CTGTCAAATACGGGTTCTTTTTTGTTAAGCTTCGTCATTCAAATATTACAATTTCACCTA
ATTTGCATGGAGACAGTTTCATGTATCAGCCTATTTCCTTCACTTCTTCACGTTGCCGAG
TAAAGTTGAACGGTTTGCAGCCCAACTCAGTTTACCAGATATATATTACAGTTACAATGG
AAAGTGGCAAACAAAAATCTTTGATGATTTCAAAATCTAGCAAATTAACGACATCATGTG
AAGAACCTTCCCCACCAAAGCACTTGAAATGTTCAAGCGTCAACAGTACGGCGTTGCTTT
TGTCGTGGAATGATTCCAACAACACTAACCAAGTTTTTTATGAAGTATTGTGGAGCAAAA
CTGGGTCGGACAGAACATATTCCTTTGTTAATACTTCCGAGTCTGGCAGTTATTTACATA
ATGGTTTGCAATATCACAACTATACATACATGAGTCTGCGATCTTCATACTGGCATTCTA
GTAAATTGCTGAAAATTTCTGGATCATTCACGTACACAATTACTGATCTCAAGTGCAATA
CTGGATACAAAATACGAACCTCACAGCAGTACGCTGGTCATAGTGGTGTTGAAGGCTGGT
CTTCTTCAGCTCCTATAGTCAGAAAAACAAAGCCAGGAACTCCAAACTTTCCTCACAATG
TCACTGTGCTTTTAAATGGAATTTTATCATGGAGCAAAGCAAATGGCAATGGATCTCCGT
TATTGGGATACANCATTTGGTGCAGAAATGAATCGTCACAACCGTTATTCTTTTCGTATG
GAGCATGGCAAAAGCTAGTGACTCTTTATAATGTGGAGTCGTTATCATGGGAGATACGCA
ATCTGCCAACAAATTTANGGTATCAATTTAGGGTTTCAGCTATTAATAAAGTTGGGGAAG
GAGACCGAAGTGATACATCAAATATTTATTTTTATCAATCTGAGAATTCTACTGGAGATT
CATCTGAAATTATTGGAGTCATTGCTGGTGTGGTAGCATTTGTTGTCTCGCTACTTGTTG
CAATACTTGTATGGTGTTGCCGGTCACGACGTAGTGGAACATCAGTTATGGATAAACCTT
CAAGTGTTTCTTTTGCCGATGAAAGCATAAGGCACTTGGAAAAACCTCATCCAGCTATGC
CGTCTAATCTTGAAACTTGCGATTCATCAAAATCTTCCAATTTGGAGCCACCTTCAAACT
TACCACTTCTTTCAAGTGAAAATCTGGAACTTTTGGAATTTCTTGGAAAAGGCGCTTTTG
GTGAAGTGTATGAAGGAATCGCCTATGACATCGGGGAAGAGCCTGGAATATCGACACGTG
TTGCTGTGAAAGTGTTACGAGAACAATCAGATGGAAAAAAAGAATTTCTAATGGAGGCCC
CAAAATTGTCCGCAGTGGATNTGATTGATATTTGTCTTGATATTGCGGCTGGTTGTAAAT
ATCTCGAAGAACATCATTTCATTCATAGAGACTTGGCGGCACGGAATTGCCTTGTATCAA
CGAAGGACTACTTGGCTCAAGACAAAGTTGTAAAAATTGGTGATTTCGGCTTGGCTAGAG
ATCTGTATAGATCGGAGTATTATCATAAGCATGGAGACGGCCTGCTTCCTGTTCGCTGGA
TGGCACCAGAATCTTTGGAACAAAATATTTATACTACCCAAAGTGACGTGTGGTCTTTCG
GGATTCTATTGTGGGAGGTGATGAGCTATGGAAAGCGACCTTATCAAATTCTCAATGATA
TTGAAATTCTACAATTTATAAAAACTGGAGGAAGATTGGAGAAACCAGATCATTGTCCAG
ATCCAATCTATCTACTGATGACAAAATGCTGGTTGAGTTCTCCCANTTTTCGACCGTCTT
TTGCATGGGCCTTGGAGTATCTGCACAATGTTAAGGACGCATGCAATGGGTTCTGTGATA
GCGATTCTGATGTATTACCCGGCGCATATGGAACTGCTTCAACTTCTGACGAAGATTTTG
CTGATGAAGGTATTCGTACATCACGATCACCATCTCCGGACTCGATAGCACATTCTAATC
TTGCATTTGAAGCGGATGATGAAGATCTCCAGTCTGTCCATTCTCTTGTTCTGCAAGAAG
TTGAAATTCAAGTCCATCATAGTGGAGATGATTCTGAAGTCGCAGATGCAACTCACTGTA
AAGAGCTTTTCGCAAGCTTTTCAGATATAGAAGATGATACTTTAGTGATTGAAAATATCG
GAGCCACGTCAAGTCTGCCCATTTCTCCAACATCATCAAGGCTGTTACCATACATCGGAG
ACTTACCAATCACAGATGAGGAAAGATTACTTCGGAAGAAACAGTGGAATCAACAGTCAA
ATTCTACGAAAGAATGAACTTGATGACGGTTGGCCTTATCCGCTACCAAAGTGGAGTATA
ACGTCGCGTGGAATGAATATGAAATGCGTGCGCGTTCGACGCTCTACCTCTACCGCGTTC
GTTTCAATATCACGAATCGCAAATCATGTGATGCAGCTGCTACGGTTTGATAACGGATTC
TTGATTTTCTATCCCCGTTGGAACAATTTATGGGCAGAATACACGTCCATAACGTATCAG
TACGCCAGTAAGAGCAAATTCCTATATATATTCGTGTGTATTTCACGTGAACTTTACTAT
TCCACTTGATGAAGCTTACACGATTTAAATTAGTTGACTCGACTTGACGACACGGATCAT
ACAATATTACAATCATTTTATGCAAGTCGAAAGTCTTGTGACTCGGATGCCTGTAGCTAC
TACAGACGTATCTATACAGGCTTGTATGGTTGCTAAGAAACTCCATGACGTACATACACA
CATCAGCGTTTACTATAGTCAGGAAAACCACAGCAAAGTGGAACCGTTGTACCTTCCGAA
CTAAACCTATGCGACACTCATACAACTATTTCCCTGACTCCGAACATCTTCTTCACCATC
CTCAGCTGAAGAAAGCAGACGCTTATTATCAGAACGACAGATAAAAGTGAATAGTTATTT
ATTCGCGACAGGCTAGACATCCTCGTAAGGTAGTCGTATCGCAATTGCGAATTTGTATGA
GACATTGCACTCCTCATAACGGCAACGGATCTTAGTAATCCGTAAAGCCCACCGAAGGTT
TCGTAGACGATGTCATTGGTCCCAACACGCGACTTGTGAAATTTTGCGATTTCCTTCTCT
CTCCAAATATCTATTTGGATCTGGAGTTTAGCGGGAGCGCTGCTGTGTTTGTTGTGGAAG
CACAAAGCGTAGACTTCTTCCTTTTCGGTTTTAAATTCGAAATCTCCCATTTGTTGTTCC
TCGATTGACGCAAGAGGCATTCCGTCACCCTGATTGTTCGGCGAGAACGCCGAAGCGGTT
ATCCGTGCCTTTGATGCGAGGGTCGGTGGGTCCACACTCTAAACATTGACAGAAATGATT
GTCTCGGCATCAGCCTCCTGGTAATAACATTGGTGGTGCCCAGGTTCTAGATCAATTCTG
AAGTCATGGGTTTCGTGATATCTTTCTCCAATGATCACCTTGTGTATATCCCTCATTGTA
TCAGCCAAATATGCGTCCAGCTCACGTCGGGCACCTTCGGAAATTTGCTCCATAATGGCG
TTGTGACTCGCCTTTCCTACGGTGATGATGCTCGCCCAAGCCAAAAATGTTATCGTGAGA
AGCAGGCCTACACTGTCACCCATTGCAAAGCTAC
| SUPERFAMILY |
FN3_sf (IPR036116) - T[203-315] 7.14E-12 - T[334-479] 9.05E-16 |
| SMART |
FN3_dom (IPR003961) - T[250-362] 0.0013 - T[379-468] 0.023 |
| CDD |
FN3_dom (IPR003961) - T[250-317] 1.08335E-5 - T[382-477] 1.07482E-11 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[252-345] 9.184 - T[378-481] 13.846 |
| Gene3D |
Ig-like_fold (IPR013783) - T[382-477] 1.8E-13 |
| Pfam |
FN3_dom (IPR003961) - T[395-471] 3.7E-6 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[459-799] 24.118 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[571-800] 1.94E-56 |
| SMART |
Tyr_kinase_cat_dom (IPR020635) - T[576-795] 8.6E-84 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[582-611] . |
| Pfam |
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[625-790] 4.0E-62 |
| PRINTS |
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[648-666] 2.1E-28 - T[703-713] 2.1E-28 - T[722-744] 2.1E-28 - T[766-788] 2.1E-28 |
| ProSitePatterns |
Tyr_kinase_AS (IPR008266) - T[654-666] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROS1_HUMAN | 35.472 % | 283 | 1.83E-79 |
| ALK_HUMAN | 37.651 % | 222 | 1.81E-59 |
| LTK_HUMAN | 36.919 % | 216 | 1.24E-58 |