- Transcript 'Boleac.CG.SB_v3.S210...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S210.g04927.01.t
Possible name(s)
LNX2; MPDZ; PATJ
Gene model
Location
S210 [92,447 / 98,000]
Amino acid sequence
Length: 1,850
>Boleac.CG.SB_v3.S210.g04927.01.p
MPSDGDFERCVDILSRLQDGVLQKKSMSKHKAALQQLMTLLENPAFREVSKLKESIKELN
RESRKDKFDIAKLNFSPETGSLTLDGKKIXTSKESDYGSESSFSDSDDDYHIDEFVKQAA
QGRETEAISLIKSENEGLGFSVVGLRSEHRGDLGIFVQDIKPGGVADRDGRLKESDQILV
INGQPLAPNISHQQAIGILQRVTGIVELLIARGGIPQEPNALLSDATPHLSRSSSVASSI
SQNSGLLPGTEWAEIETIELKNDGNGLGFGIVRGKSTGGVVVKTIVEGGAAHSDGRLRSG
DHILRIGDTDLRAMGSEHAAAVLRQCGSIVRLVVARGAMEEDDDTHDEDDNLKPTEASNX
YDPNRSRTSSVTVSLSEDESSVGPPVTSNLEYHDVELVKDSKGLGITIAGFMQDDGNETE
GMSGIYVKSVSPGSAADADGRIHAGDVIVAVDGQRLDVPNISSDEAVEILRQTGTLVKLT
VGRPKDDNQDISSTESNSLPDINKTATLAWPDFEQDHGEIPDSSELDRVQSEWETVMGPQ
YEIVTAQIKKFSITSGLGINLEGVIDEGGQPHHYIRSLLPEGPVARSKKLLPGDELLEVN
RTRILGLHQVVTVIKDLPLNVCIVCARPRVSPGLPKMRDSIILEEHEGQYFERRSSAVEN
EVPAHEVHHESEHSISSSSSESSDDDEDAKAASKALHIEGTTSDPDSAWEDEITVIHLEK
GHESLGFSILDFQDPINPQRTAILVRSIVQDGIAFRDGRLEPGDKIMFVNDIPLKNHTLE
TVVNVLKSVPPGRVTIGVAKPKPEFKVLQEKEDQPEHKEXXPEPEEQQTNTQLFVEPLPP
PPPPVPEERYSSSSSSVSDQESPDQQDVEYDKEMHRQAQLAEFQRLPEEPKQRMDSVPSV
ISEPQSADRQSVSSISHNKSPSITTQSSEDRTMEVKQMKVSGMTAIAITGYTSPVSPSES
QISFEPPAQVIQQHTASDIQPTAVTPKPRYTAPSWQKSEESRVXPLSADLYEKKIEITKG
REGLGITVAPDRDGDGLVVGSINANGVVHKVGKPGLGDIIRRINNDSCVGLGAMQARALI
TNHSKFSSAVTMIYIPKNYIQAYKDGVPPPKDLTXSALKPEHEVVKSVDALKSQFESFAS
QNTNPPRKDSDVFEDDKYKGISGDIHVVELQKGSGGLGLGLAGNKDKSLQGIYVIAVDPN
GAAARDGRIQVGDEILEINNVSVTGSDNHHRAYAVIKGAGSTLRIVLLRSKAPHSSEPRT
LSSGSSSSISNDRAPSRERKDTEKSSKSRSSRSASKVSQGSESTPASQPKTKTIKLVKDF
QGLGFAISETSSGIMVQSIATDGTADRDGRLRRGDYIIAVDDKSLEGLSYESAVKVLKES
RGTVKLTVAVDPPQSSHKTSTSNQPDPTICPILNGKETTIEISKGHSGLGLSIVGGADSL
LGSVFVQAVHDEGAAARDGRIWPGDRILQVNEHDLRTASHDDAIEVLRNSPSRVVLTVLR
NENNDPQKLDSFTYDVLLKKKPDRGLGLSILGKTSGNGVFVSNVVPGGLAASEGSIMPGD
QLVLINGVDVTHATQVDVASMLKAASGTVHFKFQRSLHAPVPKIPQNTSAAVSDRGISDD
QHHRNHDLERFVEIRKGPSQPLGISISGGIGSPLGNVPVFVAMVSXHGAASGKLEKGDKI
LSINGESTINRTHDDVANMLKASVSNSVVRLTVQPGGQDMQALAEYLTDTTAQQHGQKPT
PNPKSDNSFLSSTFVDDDYDPSRTVEIVLNRGSDGLGFSIVGGMGSVHGDLPIFVKSIFD
VGAAIVDGRLKRGXRIISVNGHIIDGCTHEXAVNILKIAKGRVILQVVPS
Nucleotide sequence
Length: 5,553
>Boleac.CG.SB_v3.S210.g04927.01.t
ATGCCGTCAGACGGGGATTTTGAGAGGTGTGTGGATATTCTATCNCGCCTTCAAGATGGA
GTGCTTCAGAAAAAGTCAATGTCAAAACATAAAGCTGCATTACAGCAACTGATGACGCTA
TTGGAAAATCCAGCATTTCGTGAAGTTTCCAAATTGAAAGAATCAATTAAAGAACTTAAT
CGTGAGAGTAGAAAGGATAAGTTTGATATCGCCAAGTTGAACTTCTCCCCCGAAACTGGA
TCTTTGACACTCGATGGGAAGAAAATTNTAACAAGTAAAGAATCGGATTATGGCAGTGAA
AGTTCTTTTAGTGACAGCGATGACGACTATCATATTGATGAATTCGTGAAGCAAGCTGCC
CAAGGACGAGAGACTGAAGCTATTAGCCTTATCAAATCGGAAAACGAAGGACTGGGATTC
AGTGTTGTTGGCCTCCGATCAGAACACCGTGGTGATCTTGGCATCTTTGTCCAAGATATC
AAACCAGGTGGTGTTGCTGACCGTGATGGTAGATTGAAAGAGAGTGACCAGATCTTGGTC
ATCAATGGTCAACCTCTAGCACCAAATATATCTCATCAGCAGGCAATTGGCATTTTACAG
CGTGTCACTGGTATTGTCGAGCTTCTCATTGCAAGAGGTGGGATTCCTCAGGAACCTAAT
GCTTTGCTATCGGATGCGACACCACATCTTTCCAGGTCATCCTCGGTTGCCAGCTCTATT
TCTCAAAATTCGGGACTGCTGCCTGGGACTGAATGGGCTGAAATTGAAACAATTGAATTG
AAAAATGATGGGAACGGTTTGGGTTTTGGAATAGTGAGGGGAAAGTCAACAGGTGGAGTA
GTTGTGAAGACAATAGTGGAGGGTGGAGCCGCTCACAGTGATGGCAGATTACGTTCCGGT
GACCATATTCTCAGGATTGGAGACACGGATCTTCGAGCCATGGGTTCTGAGCATGCTGCA
GCAGTCTTACGTCAGTGTGGAAGTATTGTTAGGCTTGTAGTTGCCAGGGGTGCAATGGAG
GAAGATGATGATACACATGATGAAGATGATAACTTGAAACCCACTGAAGCAAGCAATANT
TATGACCCTAACCGATCACGAACATCGTCCGTCACTGTCAGTTTATCCGAGGATGAATCA
AGTGTAGGACCTCCAGTTACAAGTAACCTTGAGTATCATGATGTGGAGTTGGTAAAAGAT
TCAAAAGGACTTGGAATCACAATTGCTGGTTTCATGCAAGACGATGGAAATGAAACAGAA
GGGATGTCGGGAATATACGTGAAAAGCGTTTCTCCAGGATCTGCTGCAGATGCAGATGGT
AGAATTCATGCGGGAGATGTCATTGTTGCTGTTGATGGGCAACGTTTGGATGTTCCAAAC
ATTTCAAGTGATGAAGCTGTTGAAATATTACGCCAGACTGGAACACTCGTCAAACTTACT
GTTGGCCGTCCAAAAGATGATAATCAAGACATTTCAAGCACGGAAAGCAACAGTCTTCCT
GATATTAATAAAACTGCAACTCTTGCTTGGCCCGACTTTGAACAAGATCATGGAGAAATA
CCAGACTCATCTGAGCTAGACCGAGTACAGTCAGAATGGGAGACTGTCATGGGACCACAG
TATGAAATTGTGACTGCACAAATCAAAAAGTTTAGCATAACCAGCGGGTTGGGCATTAAC
CTTGAAGGGGTAATAGATGAAGGAGGCCAACCCCATCATTACATCAGGTCATTACTTCCG
GAAGGTCCAGTTGCAAGGTCGAAAAAGCTGCTTCCAGGTGATGAATTGCTAGAGGTAAAT
CGAACAAGGATTTTAGGTTTACATCAAGTTGTAACAGTCATCAAGGATCTACCTTTGAAC
GTTTGCATCGTTTGTGCCAGACCACGAGTTTCTCCTGGGTTGCCAAAAATGCGAGATTCC
ATCATATTGGAAGAGCATGAGGGACAATATTTTGAACGTAGGTCAAGTGCTGTGGAAAAT
GAAGTGCCTGCGCATGAGGTGCATCATGAGAGTGAACATTCAATTTCAAGTAGTAGCTCA
GAGTCTTCTGACGATGATGAAGATGCCAAAGCAGCTTCAAAAGCTTTGCATATTGAAGGT
ACTACTTCTGACCCAGACAGTGCATGGGAAGATGAGATAACTGTGATACATCTTGAAAAA
GGTCATGAAAGCCTGGGTTTTAGTATTCTTGATTTTCAGGACCCAATCAATCCCCAACGC
ACAGCAATATTGGTTCGTTCAATTGTTCAAGATGGTATTGCGTTTCGTGATGGCAGACTT
GAACCTGGGGATAAAATTATGTTTGTGAATGATATACCGTTAAAGAATCATACCTTGGAA
ACTGTTGTCAATGTTCTAAAAAGTGTTCCTCCTGGCCGAGTTACAATTGGTGTTGCTAAA
CCAAAGCCCGAGTTTAAAGTATTGCAAGAAAAAGAAGACCAACCTGAACACAAAGAAGAN
NNNCCTGAACCAGAAGAACAGCAAACCAATACTCAGCTCTTTGTTGAACCGCTTCCACCA
CCACCACCACCTGTACCAGAGGAGAGGTATTCATCGTCTAGCTCATCTGTAAGTGACCAA
GAATCACCCGACCAACAAGATGTTGAATACGATAAAGAAATGCATCGACAAGCACAGTTG
GCTGAATTTCAAAGGTTACCAGAAGAGCCCAAGCAGAGAATGGATTCTGTACCTTCGGTC
ATTAGTGAACCTCAGTCTGCTGACAGACAATCTGTGAGTAGTATATCACACAATAAGTCA
CCAAGTATAACCACACAGTCTTCTGAGGACAGAACAATGGAGGTGAAACAGATGAAAGTA
TCAGGAATGACTGCTATTGCAATCACTGGTTACACTTCTCCAGTCAGTCCTAGTGAATCT
CAGATTTCATTTGAACCACCAGCTCAAGTCATTCAACAGCACACCGCTTCAGATATTCAG
CCTACTGCTGTTACACCAAAGCCCCGGTACACTGCACCGTCTTGGCAAAAATCTGAAGAG
AGCAGGGTCNCACCTTTGTCTGCTGATTTGTATGAGAAAAAGATTGAAATAACCAAGGGT
AGAGAAGGATTGGGTATCACAGTTGCCCCAGACCGAGATGGTGATGGCCTTGTTGTGGGC
TCCATAAATGCAAATGGAGTCGTCCATAAAGTGGGAAAACCTGGACTCGGTGATATTATT
AGACGGATAAACAATGATTCTTGTGTTGGTTTAGGAGCGATGCAAGCGAGAGCGCTAATC
ACAAATCACTCTAAATTCAGCTCAGCTGTCACTATGATATATATCCCCAAGAATTATATT
CAAGCTTATAAAGATGGAGTTCCTCCGCCTAAAGACCTTACTTNATCTGCTTTAAAACCT
GAACATGAAGTAGTNAAAAGTGTGGATGCTTTAAAATCACAATTTGAATCTTTTGCCTCT
CAAAACACTAATCCTCCACGTAAGGATTCTGATGTTTTTGAAGATGATAAGTACAAGGGT
ATAAGTGGCGACATTCACGTAGTTGAGCTGCAGAAAGGCTCTGGTGGTTTAGGCCTGGGA
CTGGCGGGGAATAAAGACAAGTCATTGCAAGGAATATATGTCATCGCNGTTGATCCAAAT
GGAGCTGCTGCCAGAGATGGTCGCATTCAAGTCGGTGATGAAATACTTGAGATAAACAAT
GTCTCTGTCACCGGTTCAGATAACCATCACAGAGCTTATGCTGTTATCAAGGGGGCNGGT
TCTACGTTACGAATTGTTTTGCTTAGAAGCAAGGCACCACATTCATCAGAGCCTCGCACA
CTTTCATCAGGCTCGTCAAGCTCCATCTCCAACGATCGCGCTCCTAGCAGAGAGAGAAAA
GACACGGAAAAATCCTCGAAATCACGGTCTTCCCGAAGTGCAAGCAAAGTATCACAAGGA
TCTGAATCAACACCAGCATCTCAGCCCAAAACAAAAACGATTAAGCTGGTGAAAGACTTT
CAGGGCCTTGGGTTTGCAATATCGGAGACTTCAAGTGGGATTATGGTACAGTCCATTGCG
ACTGATGGTACAGCGGATAGAGATGGACGTCTCAGGCGTGGTGATTACATCATTGCCGTG
GACGACAAGTCACTAGAAGGATTGTCTTATGAAAGCGCTGTCAAGGTACTGAAAGAATCT
AGAGGAACCGTGAAACTCACTGTTGCAGTCGATCCTCCACAGTCTAGTCATAAGACTTCC
ACTTCTAACCAACCAGACCCAACTATATGCCCCATACTTAATGGGAAGGAAACAACAATT
GAAATCAGCAAAGGACATTCAGGATTGGGTCTGAGTATCGTTGGTGGAGCAGACTCACTT
TTAGGGTCTGTTTTTGTACAGGCTGTTCATGATGAAGGTGCGGCTGCAAGAGATGGTAGA
ATTTGGCCTGGTGACAGAATTTTACAAGTCAATGAGCACGATTTACGTACAGCCAGCCAT
GATGATGCAATTGAAGTGCTCAGAAACTCACCGAGTCGAGTAGTCTTAACTGTTTTAAGA
AATGAGAACAATGATCCACAGAAGTTGGATTCTTTTACTTATGATGTACTTCTGAAGAAG
AAGCCAGATCGAGGGCTTGGTTTGAGCATATTGGGGAAGACTTCGGGTAATGGTGTGTTT
GTTAGCAATGTTGTGCCAGGAGGCCTTGCAGCAAGTGAAGGCTCAATAATGCCAGGCGAT
CAGCTCGTCTTGATTAATGGTGTCGATGTTACCCATGCAACTCAAGTGGATGTTGCTTCT
ATGCTGAAAGCGGCATCTGGCACAGTGCATTTCAAGTTTCAAAGATCATTGCATGCTCCT
GTTCCTAAAATACCACAGAATACTTCTGCTGCAGTTAGTGACAGGGGCATATCAGATGAC
CAACATCACCGTAACCATGACCTAGAGAGGTTTGTGGAAATTCGTAAAGGTCCGTCACAG
CCACTCGGGATCAGCATATCAGGAGGAATCGGTTCTCCACTGGGAAACGTCCCTGTATTT
GTTGCAATGGTGTCTNCTCATGGAGCTGCTTCTGGTAAACTGGAAAAAGGTGATAAGATT
CTGAGTATCAACGGTGAATCCACGATCAACCGAACCCATGATGATGTGGCAAATATGTTG
AAAGCTTCAGTTTCCAATTCTGTTGTGAGGTTGACTGTGCAACCAGGTGGACAAGACATG
CAAGCCTTAGCTGAATACCTAACAGACACTACTGCTCAGCAGCACGGACAAAAACCAACT
CCTAATCCAAAATCTGACAACTCATTTCTGTCAAGCACTTTTGTAGACGATGATTATGAC
CCATCCAGAACGGTGGAGATAGTTTTGAACCGTGGAAGTGATGGCTTGGGATTTAGTATT
GTTGGTGGAATGGGCTCCGTTCATGGGGATTTACCGATTTTTGTGAAATCCATTTTCGAT
GTGGGAGCGGCGATCGTCGATGGAAGGCTAAAACGAGGTGANAGAATAATTTCTGTGAAC
GGACATATAATAGACGGCTGCACACATGAAGNTGCAGTCAACATTCTGAAAATTGCTAAA
GGCAGAGTGATTCTGCAAGTCGTGCCTTCATAG
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[115-217] 1.29E-22 - T[230-338] 3.94E-23 - T[375-486] 3.68E-23 - T[526-630] 5.52E-14 - T[702-803] 1.05E-21 - T[994-1098] 4.21E-11 - T[1162-1250] 1.03E-23 - T[1303-1395] 1.16E-22 - T[1396-1503] 9.07E-27 - T[1513-1600] 2.23E-21 - T[1622-1721] 8.94E-22 - T[1748-1849] 2.1E-23 |
| ProSiteProfiles |
PDZ (IPR001478) - T[127-214] 21.591 - T[257-338] 19.24 - T[394-485] 22.556 - T[545-629] 12.486 - T[715-788] 15.4 - T[1014-1082] 10.396 - T[1167-1251] 21.149 - T[1313-1392] 19.983 - T[1419-1502] 21.531 - T[1515-1597] 19.199 - T[1631-1715] 17.008 - T[1766-1850] 18.315 |
| Pfam |
PDZ (IPR001478) - T[128-210] 6.6E-14 - T[261-334] 1.7E-13 - T[398-481] 1.9E-15 - T[553-607] 9.4E-7 - T[716-795] 5.7E-11 - T[1168-1247] 9.6E-16 - T[1320-1388] 1.7E-12 - T[1420-1498] 2.5E-15 - T[1517-1592] 3.9E-14 - T[1634-1714] 1.4E-14 - T[1767-1847] 1.8E-10 |
| SMART |
PDZ (IPR001478) - T[136-214] 5.4E-20 - T[265-338] 7.4E-17 - T[402-485] 3.0E-22 - T[555-629] 9.2E-9 - T[723-802] 1.2E-16 - T[1022-1098] 6.6E-4 - T[1175-1251] 1.6E-19 - T[1321-1392] 4.3E-18 - T[1427-1502] 2.1E-21 - T[1524-1597] 2.4E-18 - T[1640-1717] 1.1E-15 - T[1774-1849] 2.3E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MPDZ_HUMAN | 30.19 % | 697 | 0 |
| INADL_HUMAN | 35.579 % | 399 | 2.18E-113 |
| LNX2_HUMAN | 32.78 % | 203 | 1.72E-54 |