- Transcript 'KH2012:KH.C7.199.v1....' >
- Transcript 'Boleac.CG.SB_v3.S210...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S210.g04930.01.t
Possible name(s)
VPS11; VPS18
Gene model
Location
S210 [104,352 / 107,274]
Amino acid sequence
Length: 973
>Boleac.CG.SB_v3.S210.g04930.01.p
MMAYSQWRRFNFFTKEVVESNAAGKTFDMIKDCNLQCCTCGRGNLIFGDDNGFIHXVDHT
FQVNSCRAYRISVQHLVQIAEFNVLAAVGIDEEGVTPIIKVYNLDKKEKXDELFCCRVQS
AIPNNIPSDVSAFAVSGKLTMMAAGFSQGSIVXYKGDVMKDRHGNKTIVLDTDQTGPITG
LAFQDGVNTSLFATTHTQVLCYSAWEKSPSKKLLEQHGCPMFCTTMSDEIIHNQFLMAAS
DAVYAYQPDIRGTCYAFNGDKVLARWYHGYLILVYKDKTRIGSSVSALRSSAEKNMLTIY
DMSQKIIVYSHALLGVKDVLYEWGSLYVLTAENVLVCLQEIDIHSKLELLFKKNHYSLAV
NMARTQNLGHDGLMEIFTQXGNHLYSKGDFDDAIVQYQKTIGHLEPSYVIRKFLDAQRIN
NLTAYLQALHERSEANEDHTTLLLNCFTKLKDTENLDKFLSEDTNIKFDVETAIKVCRQA
AYYEQALKLAESHKKHAWYLKIQIENLKHYQEALAYIRTLQYGEATESVKKYGKLLXRHA
PEKTTELLKYLCSSYKPPSQPFGQEDTNXDIDEPNQTTGEEYIHIFVNNPEMLEKFLQHI
VELDRXSSXLVYNTLLELYLRKIADSSDPVAKRAIEDQALDLLTNLSSLDYDTDQALVLC
QMHCFRRGILFLYESAHLYQQILRYHMDHEAYGLVVDTCRRHGSKDSSLWQQALTFFAQQ
EDAKCNEHIKQVLAHIDRNNLLPPLLVIQILSRNSTVTLEVVRDYILRRLEREQDEIDQH
KKIISECEEETKRMKDQIEELSTSATIFQVNKCSLCDHKLELPSVHFLCKHSFHQHCFES
YADNDKECPVCSPENKKIMEHIREQEQALQNNQXMXDQFCKRLQHTSDGFSVVAEYFAKG
VFNKVGPVTEAKVSKSSTQNQVRSNPQAQSNPXELSIPSGGNPFESAQESIGNPFESPSL
MDELRMMTQSNRS
Nucleotide sequence
Length: 2,922
>Boleac.CG.SB_v3.S210.g04930.01.t
ATGATGGCCTATTCGCAATGGAGAAGGTTCAACTTCTTCACGAAAGAAGTAGTTGAAAGC
AACGCCGCTGGAAAAACATTTGACATGATAAAGGATTGCAACTTACAATGCTGCACTTGC
GGGCGTGGAAACTTGATTTTCGGTGATGATAACGGATTTATTCATNTAGTTGATCACACT
TTCCAAGTGAATTCTTGCCGGGCTTACCGTATATCTGTGCAACATTTAGTGCAGATAGCA
GAATTCAACGTTCTAGCTGCCGTCGGTATTGACGAGGAAGGTGTTACGCCAATAATCAAA
GTATACAATCTTGACAAAAAAGAAAAGNCAGATGAGCTATTTTGTTGTCGTGTTCAGTCG
GCCATACCTAATAATATCCCAAGTGATGTTTCAGCGTTTGCAGTATCTGGCAAGCTAACT
ATGATGGCTGCTGGATTTTCTCAGGGGAGCATTGTCATNTACAAAGGTGATGTAATGAAG
GACAGACACGGAAACAAGACTATTGTTCTTGATACCGATCAAACTGGACCAATAACTGGT
CTTGCTTTTCAAGATGGAGTCAACACAAGTTTATTTGCTACAACTCACACGCAAGTGTTG
TGTTATTCTGCATGGGAAAAGTCTCCAAGTAAAAAACTGCTCGAACAGCATGGCTGTCCC
ATGTTCTGTACCACAATGTCAGATGAAATCATTCACAACCAGTTTTTGATGGCCGCAAGC
GATGCTGTGTATGCCTACCAACCAGACATCAGAGGTACTTGTTATGCTTTTAATGGTGAC
AAAGTACTGGCTCGTTGGTATCATGGATACTTGATATTGGTTTATAAGGACAAAACAAGG
ATTGGCTCATCAGTCAGTGCTCTGCGTTCATCGGCAGAAAAGAACATGCTCACCATATAC
GATATGAGCCAAAAGATCATTGTATATTCTCATGCATTGCTGGGTGTAAAAGATGTTTTG
TATGAATGGGGCTCATTATATGTCCTCACTGCAGAAAATGTTCTTGTTTGTCTTCAAGAA
ATTGATATCCATAGCAAGCTGGAACTCCTCTTTAAAAAGAACCATTATTCTTTAGCTGTG
AACATGGCCCGAACCCAAAACTTGGGACATGACGGGCTGATGGAAATTTTTACACAGTAN
GGAAACCACTTATATAGCAAAGGAGATTTTGATGATGCGATCGTTCAATATCAAAAGACC
ATAGGACATCTGGAGCCGTCTTATGTGATCCGAAAATTTTTGGACGCACAAAGAATAAAC
AATCTCACAGCCTATTTACAAGCCTTGCATGAACGCAGTGAAGCTAATGAAGATCATACG
ACATTACTTTTGAACTGCTTCACCAAACTGAAAGACACTGAAAATTTGGACAAATTCCTA
AGTGAGGATACCAACATCAAATTTGATGTTGAAACAGCTATCAAAGTTTGCCGGCAAGCT
GCATATTATGAGCAGGCTTTAAAGTTGGCAGAAAGTCATAAAAAGCATGCATGGTATCTG
AAAATACAGATTGAGAACCTCAAGCATTATCAAGAAGCATTGGCATATATCCGCACTCTC
CAATATGGAGAGGCAACCGAGAGTGTTAAAAAGTACGGCAAATTGTTATTNAGGCATGCC
CCAGAGAAAACTACCGAACTTCTCAAGTATTTATGCAGTAGTTATAAACCTCCCAGCCAA
CCTTTTGGTCAAGAAGATACAAATNATGACATTGATGAGCCAAATCAAACCACTGGAGAA
GAGTACATTCATATCTTTGTCAATAATCCAGAAATGTTGGAGAAATTCCTACAACACATT
GTAGAACTTGATCGTNGTTCATCAGNACTGGTGTATAACACTTTACTTGAATTGTACCTN
CGCAAGATTGCGGATTCATCTGACCCTGTTGCAAAGAGAGCGATAGAAGATCAAGCCTTG
GATTTGCTAACTAACCTTTCATCTCTAGATTATGATACAGACCAGGCCCTCGTGTTGTGT
CAAATGCATTGTTTCCGTCGTGGCATTCTCTTTCTTTATGAGTCTGCCCATCTTTATCAG
CAAATATTGAGATACCACATGGATCATGAAGCGTATGGATTGGTAGTTGACACTTGTAGA
CGACATGGATCAAAGGATTCATCATTGTGGCAGCAGGCTTTGACATTCTTTGCTCAGCAA
GAAGATGCAAAATGTAATGAACACATAAAGCAAGTGCTTGCGCACATTGACCGAAACAAT
TTGCTTCCACCTTTGCTTGTGATACAGATTCTTTCCAGAAACTCTACAGTAACATTAGAG
GTTGTGAGAGATTATATTTTGCGAAGACTTGAAAGAGAACAGGATGAGATAGACCAACAT
AAAAAAATAATTAGTGAATGTGAAGAAGAAACAAAAAGGATGAAAGACCAAATTGAAGAA
CTGAGTACGTCTGCCACAATTTTTCAAGTCAACAAATGCTCACTCTGTGACCACAAGCTT
GAACTGCCTTCAGTACATTTTCTGTGCAAGCATTCATTTCATCAACACTGTTTTGAGAGT
TATGCAGACAATGACAAAGAGTGTCCTGTTTGTTCTCCAGAAAATAAGAAGATCATGGAA
CATATTAGAGAGCAAGAGCAGGCTCTTCAGAATAACCAGANCATGTANGACCAATTTTGC
AAAAGGCTTCAACACACCTCTGATGGATTTTCGGTTGTGGCTGAGTACTTTGCAAAAGGG
GTGTTTAACAAAGTGGGTCCTGTGACAGAGGCTAAAGTAAGCAAGTCAAGCACCCAGAAT
CAAGTCAGATCAAATCCGCAAGCTCAAAGCAATCCATTNGAGTTGTCAATACCATCTGGT
GGCAATCCATTTGAGTCTGCTCAAGAGTCTATAGGAAATCCATTCGAGAGTCCAAGTCTG
ATGGATGAGTTACGAATGATGACACAGTCAAATAGGTCATGA
| PANTHER |
VPS11 (IPR016528) - T[2-917] 1.1E-292 |
| PIRSF |
VPS11 (IPR016528) - T[2-581] 6.2E-167 - T[567-909] 1.3E-95 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[37-242] 9.71E-7 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[332-632] 5.8E-11 |
| ProSiteProfiles |
Clathrin_H-chain/VPS_repeat (IPR000547) - T[397-545] 27.362 - T[566-726] 16.844 |
| Pfam |
Clathrin_H-chain/VPS_repeat (IPR000547) - T[405-531] 1.4E-13 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[808-873] 2.4E-7 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[813-852] 10.852 |
| Pfam |
VPS11_C (IPR024763) - T[855-903] 2.4E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS11_HUMAN | 47.391 % | 872 | 0 |