Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 769

>Boleac.CG.SB_v3.S220.g05198.01.p
MAATNDQDEKGIKKDLVQKHTLMKENELRFEVEAGERVKLELMNGNAEIFGTELVRTRVY
IXESSSKSAVYTWHGCTIKLTGKLEVAYVSKETPMVMYLNTHCAIETLRRKAESEDTRGP
RVLIVGPQDVGKSXLTRILANYGIRMGRKPTLIDVDVGQGGVSIPGTMAAVTVERHADPV
SGFDSKYPLVYHFGHTSPNGNLKLYQVLISRIADVFNAKCECNPSIKAGGCIINTCGWIK
GQGYNSILHVSEQFQCDAVLVLDNERLHNDLKRDLPDFVDIVLLPKSPGVVERSRDXRRD
YREEKIKEYFYGPNKSYFPHLYDISFSDICIYKIGAPELPDSCLPLGMEPEDSQTKLVPV
KPQLDLVHHILSLSMAESLEENLIETNIAGFVVVTGVDPDRETISLYLSMYKESHSASIP
ISIFSIQGQKISINVQLDTVIENLRDEAIKKFSGIKGCGFDNLAEYVLVPAINPTRQLVA
KNTVKVENVQASDVLLLHKISSTVELSKSSSKANGIPTKPGIEKATEGLPSRGMPASRNA
ATQNLGGNLEQTFRKILLTLLDLSYKLMFFDDEADDIFKKKPQIDPSLISSLTAMGFSEE
RACKALTASGLDLEAAMEWLLHSPEEAERMDIDTKDTVEGGTGDSPVVHDAAARVRRRFE
LWQEKNSSSQPKKEHVEMLVAMGFKESESLEALKYNGNNPNAACDWLLGDRKVPAGNPNE
CLSRDSELYKAITTDPAIHTGLHNKRVLEALEDMLDNPMRRHNWANDPT

Nucleotide sequence

Length: 2,307

>Boleac.CG.SB_v3.S220.g05198.01.t
ATGGCAGCAACTAATGATCAAGACGAAAAAGGAATAAAGAAAGACCTGGTTCAGAAGCAT
ACTCTGATGAAAGAGAATGAACTTCGCTTTGAGGTGGAAGCAGGAGAGCGAGTGAAACTA
GAGCTTATGAATGGCAATGCTGAAATATTTGGAACCGAACTTGTCCGCACAAGAGTTTAC
ATTTTNGAATCCTCATCTAAATCAGCTGTATATACTTGGCATGGTTGCACTATCAAATTA
ACAGGAAAATTGGAAGTGGCATATGTTTCTAAAGAAACTCCAATGGTTATGTATTTGAAT
ACGCACTGCGCTATTGAAACTCTACGGCGGAAAGCTGAAAGTGAAGATACAAGAGGACCT
AGGGTTCTTATTGTAGGCCCTCAAGATGTTGGAAAAAGTNCTTTAACTAGAATTTTGGCA
AACTATGGAATAAGGATGGGTCGAAAGCCTACACTTATTGATGTTGATGTTGGTCAAGGG
GGTGTTTCTATCCCTGGGACAATGGCTGCTGTTACTGTAGAGAGGCACGCTGATCCTGTT
TCAGGATTCGATAGTAAATATCCCCTTGTATATCACTTTGGGCATACTTCACCGAACGGC
AACCTTAAGCTATACCAAGTTCTTATATCAAGAATAGCAGATGTATTTAATGCAAAATGT
GAGTGCAATCCTAGCATCAAAGCCGGTGGCTGTATCATCAACACTTGTGGTTGGATCAAA
GGCCAAGGTTACAACAGTATACTTCATGTATCAGAGCAATTTCAATGTGATGCGGTTCTG
GTGCTTGACAACGAGAGACTTCACAATGATCTAAAGAGAGATTTACCCGATTTTGTCGAT
ATTGTGCTGCTTCCGAAATCACCAGGGGTGGTGGAACGTTCTAGGGATTTNCGACGAGAC
TATCGNGAAGAAAAGATCAAAGAATATTTTTACGGACCGAATAAATCATATTTTCCACAT
TTGTATGATATCAGTTTCTCAGACATTTGTATCTATAAAATTGGTGCTCCGGAACTTCCT
GATTCTTGTTTGCCGTTGGGCATGGAACCTGAAGATTCTCAAACCAAACTTGTTCCGGTG
AAACCTCAACTTGATTTGGTTCATCATATACTTAGCCTTAGTATGGCTGAATCTCTCGAG
GAGAATCTTATAGAAACAAATATTGCTGGTTTTGTTGTCGTTACTGGAGTTGACCCAGAT
AGGGAGACAATAAGTCTTTACCTAAGTATGTACAAAGAGTCTCATTCTGCTTCAATACCT
ATCAGTATATTCAGCATTCAAGGCCAAAAGATATCAATTAATGTTCAGTTAGACACTGTG
ATTGAAAATCTAAGAGATGAAGCTATCAAGAAGTTTTCCGGAATTAAAGGCTGTGGATTT
GATAATCTGGCGGAATACGTTCTAGTACCGGCTATCAACCCTACTAGACAACTTGTTGCA
AAGAATACTGTCAAGGTTGAAAATGTACAAGCATCAGACGTTCTACTTCTTCATAAAATA
AGTAGCACTGTGGAATTGTCAAAAAGTAGTAGTAAAGCCAACGGCATACCTACCAAACCA
GGAATTGAAAAGGCCACTGAAGGTTTGCCTTCAAGAGGTATGCCAGCATCACGAAATGCG
GCTACTCAAAATTTGGGTGGAAACTTAGAGCAAACATTCAGAAAAATTCTGCTGACACTC
TTGGATCTTTCATATAAATTGATGTTTTTTGACGATGAGGCAGATGACATATTTAAAAAG
AAACCCCAAATTGATCCATCTCTTATATCATCACTTACAGCAATGGGCTTTTCTGAAGAA
AGAGCNTGTAAAGCCTTGACNGCAAGTGGGCTTGATTTAGAAGCTGCTATGGAATGGCTT
TTACATAGTCCCGAAGAGGCTGAGAGAATGGATATCGATACCAAGGATACTGTGGAGGGN
GGTACAGGTGATAGCCCGGTTGTGCATGATGCAGCAGCTCGGGTCAGACGGAGGTTTGAG
TTGTGGCAAGAGAAAAACAGCAGTTCACAACCAAAAAAAGAACATGTTGAAATGCTGGTG
GCTATGGGATTTAAAGAAAGTGAAAGCCTAGAAGCCTTGAAGTATAATGGAAACAATCCT
AACGCCGCTTGTGATTGGCTTCTTGGCGATCGTAAAGTTCCTGCGGGCAATCCTAACGAA
TGCCTTTCTCGAGATAGTGAATTATATAAAGCAATAACAACTGATCCAGCTATACACACG
GGACTTCATAATAAGCGAGTTTTGGAGGCGTTGGAAGATATGCTTGATAATCCGATGAGG
AGACACAATTGGGCCAATGATCCAACA

InterProScan

Gene3D	Clp1_N_sf (IPR038239) - T[10-93] 1.9E-28
Hamap	Clp1 (IPR028606) - T[17-428] 26.237
Pfam	Clp1_N (IPR032324) - T[22-112] 2.7E-30
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[120-161] 2.37E-7 - T[209-287] 2.37E-7
Pfam	CLP1_P (IPR032319) - T[126-312] 3.4E-67
Gene3D	Clp1_C_sf (IPR038238) - T[319-424] 1.6E-30
Pfam	Clp1_C (IPR010655) - T[319-406] 1.6E-18
SUPERFAMILY	UBA-like_sf (IPR009060) - T[580-628] 1.23E-12 - T[665-711] 5.84E-12
ProSiteProfiles	UBA (IPR015940) - T[583-623] 14.475 - T[670-710] 12.86
SMART	UBA (IPR015940) - T[585-622] 1.1E-7 - T[672-709] 6.1E-7
Pfam	UBA (IPR015940) - T[585-620] 2.1E-7 - T[674-707] 1.2E-8