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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Boleac.CG.SB_v3.S228...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S228.g05356.01.t

Possible name(s)

MESP2; MSGN1; PTF1A

Gene model

Boleac.CG.SB_v3.S228.g05356

Location

S228 [79,339 / 79,948]

Sequences

Amino acid sequence

Length: 142

>Boleac.CG.SB_v3.S228.g05356.01.p
AADLPTAHPQSYDYSCAPGSYPAAVNLATPHRFHGTTNQKGPFAIDKDKKRLKIFNEAME
TLQNVIPVXLPKGRKLQKKQTLQFAIKYIEFLQSCIDGKNDFNDRHRFLWVEGTEQSDAI
HAIDEAASKSSGNDSTHHKHNG

Nucleotide sequence

Length: 426

>Boleac.CG.SB_v3.S228.g05356.01.t
GCTGCTGATCTTCCCACTGCCCATCCACAGAGTTATGATTATTCTTGTGCCCCCGGTTCT
TATCCCGCTGCTGTAAATCTCGCAACACCTCATCGTTTCCATGGTACCACCAACCAAAAA
GGTCCTTTCGCAATAGACAAAGATAAAAAGAGATTGAAAATTTTCAACGAAGCGATGGAA
ACGCTACAAAACGTTATACCGGTGAGNTTACCGAAGGGTCGAAAACTGCAGAAAAAGCAA
ACTTTGCAGTTTGCCATCAAGTATATTGAATTCTTACAAAGCTGCATTGATGGAAAGAAT
GACTTCAACGATCGCCACCGTTTCCTGTGGGTTGAGGGAACAGAACAAAGTGATGCGATC
CATGCGATTGATGAAGCTGCATCGAAATCATCAGGAAATGACTCAACTCACCATAAGCAC
AACGGA

InterProScan

PANTHER
Twist-related (IPR015789) - T[37-130] 3.7E-20
ProSiteProfiles
bHLH_dom (IPR011598) - T[39-92] 10.467
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[42-103] 1.2E-11
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[42-108] 3.93E-11
CDD
bHLH_dom (IPR011598) - T[44-93] 6.50323E-8
SMART
bHLH_dom (IPR011598) - T[45-98] 1.6E-5
Pfam
bHLH_dom (IPR011598) - T[48-93] 5.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value