- Transcript 'Boleac.CG.SB_v3.S234...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S234.g05575.01.t
Possible name(s)
DHX58; ERN1; ERN2
Gene model
Location
S234 [171,041 / 181,001]
Amino acid sequence
Length: 1,128
>Boleac.CG.SB_v3.S234.g05575.01.p
MSKFEAPPNWRTVGQSRQIKIGKVIGEGAGSHVYEGFFQSKHVAVKSLLYDGNPQEVEIL
RGLSNENVIRIHYKDTSDTTLYMVLDFCRYTLKEYVCKEEVNEKINLSDVEVLRQVTEGL
DYLHNGQTVSTVHRDLKPSNILFKFVDREKIWVVKISDFGISKDFVHSKTSTISEMKGSN
GFVAPELIPLADGSAGPGKIRKEIDVFSLGIIFYYVFSKGLHPYSDDMTNVNEKVRDNHP
NLSGLSQEIADKVTSLILSMLEKDFSMRIKIADVKAHHLFWDDEKKLEFLKKVSDFLENR
EKHKELLQELEIHGSEVINGNWKNKMVEDKPEVKRVLEKRGQKDYTSLQALMRQIRNWIS
HYHDKSTTEKLRDEIGEYPSGFLEFFSSRFPKLISCLYDFMQVWKEEEMWQKYYKPQRQE
SVTCDINMMEIXXETISEEPSQENEAAVMKQSVVDMEVDDVLRGALHSSDEDEDLDSAAA
LEKPAPDNLVLRPYQQELAKQALDGNNSLIIAPTGSGKTAVANEIIKNHLRTSGSKSIIF
LVSKTTLAKQQYEFFSKFLSGYLSVKEIVFLIGETTSKIAVGAVIKTMKLTILTPQXLIN
EMASGMVMTVTCNIIPGGPIMRDLPICWKLQTIGMTASPGVGKGKTRNEVLENLITLLAN
LNVNMNPARVEENVEDLKKYQNTTKQNFIRVDILPDRFTRKILEAMQFLEEKLKQRDVFG
PARSQTAPPPEEKEKQKYENWVMDLIRHAQLKIDDGELMRVVILFANHLKMYHNLLSLKR
LIPFALEAVQQQAEFEQECLEGRIVRAIYQRSNEHADIGGMTKAEQASALNAFRDGKCKI
XIATSVAEEGLDIRECNLVIMYNYVTGEVGRIQRAGRGRAENSRSILLTACGSDHIEREK
MNEICALATDVAIKDLKCLSDEQRKAKVDEVQKKQRKERLTLLTKNRQKLQEAAKWKILC
GQCKKYIARADKIRHINNQHRFVVDENFYDVVERIPCDPHPIAPGTLMEEVASFLCGNRE
CRHKLGVEMQYKDKTYPSLTARRLVFEDDYGNTITSKQWSKCPFEVERAVDDDREEVDEN
QIQEFVASQAASAAKGFISDDISLDDDAKEAIDLLNVKSSSKRFYVTI
Nucleotide sequence
Length: 3,701
>Boleac.CG.SB_v3.S234.g05575.01.t
CAGTTATCTCAATTGACACTGTATTTTATTATTGTTTATTGTTTATAAATGAGAAGTGAG
AAATACAAATGAGTAAATTTGAAGCACCGCCAAATTGGAGAACTGTTGGCCAATCGCGGC
AAATCAAAATTGGCAAGGTGATTGGAGAAGGAGCAGGATCACATGTGTATGAGGGATTTT
TTCAATCCAAGCACGTTGCTGTTAAAAGTCTACTTTATGATGGGAATCCGCAAGAAGTAG
AGATATTAAGAGGACTGAGTAATGAAAATGTGATACGGATTCACTACAAGGATACATCAG
ATACCACTTTATATATGGTCTTGGACTTCTGTCGTTATACACTAAAGGAGTATGTTTGCA
AGGAGGAGGTAAATGAGAAAATCAATCTATCAGATGTTGAGGTGTTGCGTCAGGTTACAG
AAGGATTGGACTATCTTCACAATGGCCAGACAGTTAGCACAGTGCACAGAGATCTGAAGC
CATCCAACATTCTTTTTAAATTTGTTGACCGTGAGAAGATATGGGTTGTGAAAATATCTG
ATTTTGGAATAAGCAAAGACTTTGTGCACAGCAAAACTTCAACAATATCGGAAATGAAAG
GATCAAATGGATTTGTGGCGCCTGAATTGATACCTCTAGCAGATGGATCAGCTGGACCTG
GAAAAATCAGAAAGGAAATTGACGTTTTCTCTCTTGGTATCATCTTCTACTATGTATTCA
GCAAAGGGTTGCATCCGTATAGTGATGATATGACCAATGTCAATGAAAAAGTTCGTGACA
ATCACCCAAACTTGTCTGGTCTCAGTCAAGAAATTGCTGACAAAGTGACGTCATTGATTC
TTTCAATGCTGGAAAAGGACTTTTCGATGAGGATAAAAATAGCAGACGTGAAAGCCCATC
ACTTGTTTTGGGATGATGAAAAGAAATTGGAATTTCTGAAGAAAGTGTCGGACTTTCTCG
AGAATAGGGAAAAACACAAGGAGCTGTTACAAGAACTTGAAATTCATGGAAGTGAAGTCA
TTAATGGCAATTGGAAGAATAAAATGGTGGAAGATAAACCAGAAGTGAAACGAGTCCTTG
AGAAAAGAGGACAGAAAGACTATACATCATTGCAAGCATTGATGAGGCAAATACGAAATT
GGATCAGTCACTACCATGACAAAAGTACAACAGAAAAGCTAAGGGATGAGATTGGCGAAT
ATCCGTCTGGCTTCCTTGAATTTTTTTCATCGCGCTTTCCAAAGTTGATTTCTTGTTTGT
ATGATTTCATGCAAGTTTGGAAAGAAGAGGAAATGTGGCAGAAGTATTACAAACCGCAAC
GGCAAGAATCTGTTACCTGTGATATTAATATGATGGAAATACNAAGNGAAACAATTTCTG
AGGAACCAAGCCAGGAAAATGAAGCAGCTGTTATGAAACAATCAGTTGTTGACATGGAGG
TTGATGATGTGCTTCGAGGAGCTTTGCACTCATCGGATGAAGACGAGGATTTAGACTCTG
CAGCAGCATTGGAAAAACCTGCACCAGACAACCTTGTTCTCAGGCCATACCAACAAGAAC
TGGCAAAGCAGGCATTGGATGGAAATAATTCTTTAATCATTGCACCGACAGGTTCGGGTA
AAACTGCTGTAGCCAATGAGATTATCAAGAATCATTTACGTACATCTGGATCAAAATCCA
TTATATTTCTTGTATCAAAGACAACACTCGCCAAGCAGCAATATGAATTTTTTTCAAAAT
TTTTGAGCGGATATCTGAGTGTGAAAGAGATTGTTTTTCTGATCGGTGAGACCACCTCTA
AAATAGCGGTCGGAGCAGTTATAAAGACAATGAAACTGACAATTTTGACTCCTCAGATNT
TAATCAATGAGATGGCAAGTGGTATGGTAATGACTGTAACTTGCAACATCATTCCTGGTG
GTCCTATAATGCGTGACCTTCCAATTTGTTGGAAACTTCAGACTATTGGAATGACTGCAT
CGCCGGGAGTTGGGAAAGGGAAAACAAGGAATGAAGTATTGGAAAATTTGATCACACTTC
TGGCAAACTTGAACGTCAATATGAATCCTGCTCGAGTGGAAGAAAATGTCGAGGACCTGA
AAAAATATCAAAACACAACAAAACAAAACTTCATTCGAGTCGACATACTTCCTGACAGAT
TTACAAGAAAAATTCTAGAAGCAATGCAGTTTTTGGAGGAGAAATTGAAACAAAGAGACG
TCTTTGGTCCAGCAAGATCACAAACTGCACCCCCGCCAGAAGAAAAAGAAAAACAGAAAT
ATGAAAACTGGGTGATGGATCTTATAAGGCATGCTCAGCTGAAGATTGATGATGGAGAGT
TGATGAGAGTCGTGATCCTATTTGCTAATCATTTGAAGATGTATCATAATCTTCTTTCCT
TGAAAAGACTGATTCCATTTGCATTGGAGGCTGTACAGCAGCAAGCTGAATTTGAACAGG
AATGCTTGGAAGGAAGAATTGTGCGAGCAATATATCAGAGATCCAATGAACATGCTGATA
TAGGAGGAATGACCAAGGCCGAGCAAGCAAGTGCTTTGAATGCATTTCGAGATGGAAAAT
GCAAAATATTNATCGCAACATCAGTAGCTGAAGAAGGGCTGGATATAAGAGAATGCAACC
TTGTCATAATGTACAATTATGTAACTGGTGAAGTGGGTCGGATTCAACGGGCAGGACGTG
GTCGAGCTGAAAACAGTCGGTCCATACTTTTGACCGCTTGTGGAAGTGATCATATTGAAA
GGGAAAAAATGAACGAAATTTGTGCCCTTGCTACGGATGTTGCTATCAAAGATTTGAAAT
GTCTTTCAGATGAACAACGTAAAGCAAAGGTCGACGAAGTTCAAAAGAAACAAAGAAAAG
AAAGGCTAACACTGCTTACTAAGAACAGGCAGAAACTGCAAGAGGCAGCAAAGTGGAAAA
TTTTGTGTGGCCAATGCAAGAAATATATAGCAAGAGCTGACAAGATTCGTCATATCAATA
ACCAGCATCGATTTGTGGTTGATGAAAATTTTTATGATGTTGTTGAAAGAATCCCATGCG
ATCCTCATCCTATAGCTCCAGGTACTCTGATGGAGGAGGTAGCATCGTTCCTTTGTGGAA
ACAGAGAGTGTAGACATAAACTAGGAGTGGAAATGCAATACAAAGATAAAACTTATCCAA
GTCTGACAGCNAGGAGACTGGTATTTGAAGATGACTATGGTAACACAATAACATCCAAAC
AATGGAGCAAATGCCCTTTTGAAGTTGAAAGAGCAGTCGATGACGACCGGGAAGAGGTTG
ATGAGAATCAAATTCAAGAGTTTGTGGCTTCTCAAGCTGCATCTGCTGCAAAAGGTTTTA
TATCAGATGATATATCGTTGGATGATGATGCCAAGGAGGCTATTGATCTTTTGAATGTGA
AGTCATCAAGTAAAAGGTTTTATGTGACAATTTAATGGTGCAATGAAATTTATGACAAAT
TATCTTACTGTAGCTGCACTTGTGAATTGTAGTATAATAGCGTTTTTGTTCATGTCACTG
CTTGTATTATGGAAATTGATGTCGCCTCAACCGCTTGATAAAAGGCTTGACAACTATGGT
CAGCTAGCTCCATAATTTTGGGCCTCTGAAAATAGATGGCTGACCTTTTGCATTTATGCA
GCGCAAGAGGGGCAAAAGGGAGTCCATTATCTACCGGCAGG
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[18-294] 9.44E-48 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[19-280] 33.587 |
| SMART |
Prot_kinase_dom (IPR000719) - T[19-280] 4.9E-39 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[21-280] 2.7E-38 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[25-46] . |
| Gene3D |
KEN_sf (IPR038357) - T[283-429] 2.7E-30 |
| ProSiteProfiles |
KEN_dom (IPR010513) - T[283-416] 23.547 |
| Pfam |
KEN_dom (IPR010513) - T[286-414] 3.0E-24 |
| SMART |
PUB_domain (IPR018997) - T[346-405] 3.8E-5 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[387-640] 2.3E-24 - T[505-560] 3.41E-26 - T[802-917] 3.41E-26 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[487-673] 2.6E-10 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[493-603] 2.3E-11 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[499-657] 16.004 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[770-939] 13.238 |
| SMART |
Helicase_C (IPR001650) - T[794-881] 3.9E-11 |
| Pfam |
Helicase_C (IPR001650) - T[819-880] 5.5E-14 |
| CDD |
Helicase_C (IPR001650) - T[819-888] 6.38202E-12 |
| ProSiteProfiles |
RLR_CTR (IPR021673) - T[945-1076] 24.864 |
| Gene3D |
RLR_C_sf (IPR038557) - T[952-1079] 1.1E-20 |
| Pfam |
RLR_CTR (IPR021673) - T[957-1068] 7.7E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ERN1_HUMAN | 31.421 % | 178 | 1.38E-45 |
| ERN2_HUMAN | 32.117 % | 208 | 2.71E-55 |
| DHX58_HUMAN | 29.134 % | 114 | 8.18E-26 |