- Transcript 'Boleac.CG.SB_v3.S23....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S23.g05439.01.t
Possible name(s)
CADM1; CADM2; CADM3
Gene model
Location
S23 [344,715 / 356,700]
Amino acid sequence
Length: 427
>Boleac.CG.SB_v3.S23.g05439.01.p
MDAKFLLAIIVAVAVKEGFATYEVSGGDATVLSGKSVTLKCQFTKLDNETDYPIPIWKDG
SRELLFFDNRPVQADRNRMSSTGSRYETELVIEDVVISDEGNYICGLNGVKPPIYHTNTL
TVNQYPQQFYVVNFDXTLQXGNEASVAKCVTKGTKPEPKMWFTDPNGDVVPLVDNAEVVX
SENGLVDKNITLKKTFTKSDNGKNYQCHVERADSTTETRETAQINVQFSPSVMLDGLLQN
NLEIREEGNSFEATCVARGNPSPTITWQFVPNKNTNVTLPIGENLPRNWQSYGSRIISNG
LLKSTVGSTNNGTFTCTAGNGVGSPASVSFSLGVYALPDVTTKQKESTAVAEPRTAGSNG
AVIGGVVAVAAFVIIVAVLLIARYFMSHKGTYRTKETKFEDDAEKGDPAGDEDEEFLAER
KKTEYFL
Nucleotide sequence
Length: 3,050
>Boleac.CG.SB_v3.S23.g05439.01.t
GAGGGTGTGGGTGGTTTGTCAAATGTGACTGGTAGAGAGCAGGCTATAGAGGCTCACCAT
TACCTCTCTGTATAGTTTACCTATTGAAGGCAAGCCTGTCACAGAAGAGAGGAGGAATAG
GCAAAAGGTTTCCAAAAGTGTTTGCTCTTCATATTGCTTGACTGGAATTGTTACCGTAAT
TTGGATTATGGACGCGAAATTTCTTCTTGCAATCATTGTGGCAGTCGCAGTGAAGGAAGG
TTTTGCAACCTATGAAGTTTCTGGAGGTGATGCTACTGTTCTTAGCGGGAAATCGGTAAC
TTTGAAATGTCAGTTCACCAAACTGGACAATGAGACGGACTATCCGATACCTATATGGAA
AGACGGCAGCAGAGAACTCTTGTTTTTTGACAACAGACCGGTTCAAGCTGATAGAAATCG
GATGTCTAGTACAGGTTCAAGATATGAGACTGAGCTTGTGATCGAAGACGTGGTTATCAG
TGATGAAGGCAATTATATATGTGGCTTGAACGGTGTAAAACCTCCTATCTACCATACTAA
CACACTTACAGTGAATCAATATCCACAGCAATTCTATGTTGTAAACTTTGACNCTACTCT
TCAAGANGGAAATGAGGCATCTGTTGCAAAATGTGTAACNAAAGGAACAAAGCCAGAACC
AAAAATGTGGTTTACAGATCCAAATGGTGATGTAGTGCCACTCGTTGACAATGCTGAGGT
TGTANTCAGTGAAAATGGTCTTGTTGATAAGAATATTACACTAAAGAAGACCTTTACTAA
ATCCGATAATGGAAAGAACTACCAATGCCATGTGGAGAGAGCTGACAGCACTACAGAGAC
GAGAGAAACGGCACAGATCAATGTTCAATTTTCCCCATCTGTTATGCTGGACGGCTTACT
TCAGAATAATCTTGAAATTCGAGAGGAAGGGAACTCGTTTGAAGCTACATGTGTTGCACG
AGGAAATCCCTCCCCTACTATCACTTGGCAATTTGTTCCTAATAAAAACACCAATGTCAC
ACTGCCTATTGGTGAAAATTTGCCCAGAAACTGGCAAAGTTATGGCTCAAGGATCATTTC
TAATGGTCTGCTCAAAAGCACTGTAGGATCAACCAACAATGGAACGTTCACCTGCACTGC
AGGTAATGGTGTTGGTTCACCTGCGTCTGTTTCATTCAGCCTGGGAGTTTATGCTTTGCC
TGATGTGACCACAAAGCAAAAAGAAAGTACGGCTGTTGCCGAGCCTCGCACGGCAGGATC
TAATGGAGCTGTAATTGGAGGCGTAGTNGCAGTGGCTGCTTTTGTGATAATAGTCGCCGT
GCTGCTAATCGCCAGATACTTCATGTCACACAAAGGCACATACCGCACCAAGGAGACTAA
ATTTGAAGATGATGCTGAGAAGGGAGATCCGGCGGGAGATGAAGATGAAGAATTTTTAGC
CGAGAGGAAAAAGACCGAGTACTTTTTGTAATGCAGAATATTGACTTATTCAAAATCGAC
CATGGCAGACCATGATTTCAGCGAACGGCAACCATGGTATGAAGTAGAACCGACCAGCTT
CGTTTGCTCAATTTTTATACCTGAATTACTGAAATTTATGCTTTTATCGTATTAGAAAAT
GCAAACTTAGATAACGTCTTCATTAAAAATGGTACTTTATTTTTTATGAGGGCTATAATG
AGTCTGTGTATGTAGCGTAGACCCATCCTCCTTCAACATGTGTCCATTGACCAACTCTAA
TTTTGCCTGCATAAATAATTTTCATTATTGCTGTTGTGTTTGGCATCTATCGTTCGCGAT
GCTTCGCTGGGAGTTTATCACGTAACACAGCATGTAGCCTATTGACTGTAAGTTATATTT
TCTGGGTCAATTTAATGATTTGACCAATTCCTACTATTGGCTATTTCTTTGAAGAACCAA
GTTACCGTAATGTGTGCCNCCTTGTTGAGTTTGGCAAGATTCAACAATTCAGTAATATTC
AGTTGCGGGTTATTGTTGGTAGGAACATTAATATTGTATGTCTGCCACATTGTGCCGTGT
ATGTTCCTGTTCACGTTGGATATTTTAAATTTCTCCTTGATATTTTGTTATAATATCATT
GGATATCAAGTTTGAATTGCTTAGGATTTATATGCAATTGTNTATCTGGAACCGTTTGCC
TTATGAATTGTGCACTTGGTTATCGATATCATTGTTCTAGTTTTGTATCCAGACCTTGCG
ACTGACAACTCCATATATGTTTTTCAACAAACACCAAAACTTCATTCACACAGATGCCTA
TTACGATCCTGCAACTCATTACATACAGACTTGCGTCTTGAAAATCACATANGACTTGAC
CAAATGCTATCATGCAATAGGAATGGTTAATAACCATTGGTTATATTTGAAAGTTTTTCT
TATGTGAGTTGGATCTCACCTTGATCTGTATCTTATGCGGAATCTGCACGATTTTTGTTA
AGCATTGGTTATCTTGGCCTATTTCCTATCATGTATTTTTCACCATTGTGATCTTCTTTA
CTTTATGCTATTTGTGCTACGTTTTAGTTATGTTGTTGTGTGGTACGGAATAAACGATAC
ACGGTGCTCTTTAAAACTTGTAACTTGGATTGCCATATTGTGATGGTACAATTTTACATT
GCACTGTAATCTAACAATTGTTGTGTTTTGTGTATTGAGCTTTTTTTTCATATAAAACCG
TTGCTGACATAACACATAGATTAGTGAACAGTGCCTATGGATTGATTTAAAGAAGTGCCA
ACCAGGCCAGCGACGGTGGAGCATTGCCGACACCTCTAGATAAAAGAATGGTAAAGGCAA
TTCTTTGCTTGACGCCTTACCCCGCGCAAAGCGAAGTAACTTTGCGCGATGTATGACAGC
TGCCTANAAACTTTTTCATTGCTGGGTAACTCTTATAGAAGAGATGCACTCGGACGATGT
AGTGTTTTTTCTCGTATGCTTATTTGAATTTCCGGAGTTATTAAACCGGATTCAAATTCG
GCAACTATCTTTAGCGTTACGTTACAATTGATCCTTTCGCTAACTAGCGA
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[17-121] 8.103 - T[126-225] 7.958 - T[230-329] 10.408 |
| Gene3D |
Ig-like_fold (IPR013783) - T[23-130] 9.7E-13 - T[131-232] 1.2E-10 - T[238-335] 4.7E-11 |
| SMART |
Ig_sub (IPR003599) - T[26-123] 9.3E-6 - T[240-335] 0.3 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[28-127] 6.98E-10 - T[126-230] 2.54E-6 - T[246-341] 4.14E-10 |
| Pfam |
Ig_V-set (IPR013106) - T[30-115] 1.2E-6 |
| SMART |
Ig_sub2 (IPR003598) - T[32-112] 0.74 - T[246-323] 1.0E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CADM2_HUMAN | 26.906 % | 111 | 5.37E-27 |
| CADM1_HUMAN | 29.695 % | 98.2 | 2.51E-22 |
| CADM3_HUMAN | 25.432 % | 97.8 | 2.64E-22 |