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TRANSCRIPT CARD

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  1. Transcript 'Mooccu.CG.ELv1_2.S71...'
  2. Transcript 'Harore.CG.MTP2014.S2...'
  3. Transcript 'Boleac.CG.SB_v3.S23....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S23.g05453.01.t

Possible name(s)

AFAP1; FARP1; FARP2

Location

S23 [481,706 / 506,969]

Sequences

Amino acid sequence

Length: 633

>Boleac.CG.SB_v3.S23.g05453.01.p
MSANYYWRQTDKSFDINDNCDGITSSSSHRIMEISSPQLVVTSEEDNHQTLQVPSEKEYK
GPSNRRLRRFSLKKFPSTGDIRKMKNEGTLIIIYTWQRPVPALSMATASQSGYMDRRNKK
KKWEKLWCVLNDTCLFCYHSPQSEFTQDAVVLRGYTVSADISDVQKAKFTFKLDKKGHPT
YHFRCDDHKTFMQWVCMIKKESSVAVSEASDNEILHNSMKNSTQTTSRTTQPANSSNQSI
SPANSHQSLSRRHTSENIFRLNRREHLELELQKENLLREVLEQQKEIIKERNSILSSPSP
EQSRPYYVPLVRDLDSPKPTKNEVMDKYERVKETQQMKILKSLTQLHRRRNSVQLKIDQL
SRDSKPKRRSRHANRYVIHSMEARLDLLRSELSDIDRDIREHQASKEDIMDSLNHKRDLE
IMVLDQQECLDIVRRGQSSPFRYQQERGRGRTRRQSNVTVSSSSSYMTEHLTSIDETTTV
ISHSDSSSTSSGLYNSCIELNTSEPMQKAAASTPRCKSSCPFEHVNDDEIDGSKLMNRSK
SSQNIAISKALSCSSDADEIFGVEGALSDDFRSLSASSYSDLDGECRTRVSSSDESLGAN
KKTDEVRPDVLAEIEDFEIFSKMMLQRLHSAKC

Nucleotide sequence

Length: 3,459

>Boleac.CG.SB_v3.S23.g05453.01.t
AGTTATAGTGTGCGAATAATGTACTGCAAATATCGAAGAGACAATATNTAGCATTATTTC
CGCATTCTCTGCTGTTGACATCTTCCATTTGAAACGCCAGCGGATAAACTTTCGTTGAAA
GGATTACTAAATTTCATAATGAGGACTCTAAAGAAAGTTCGCAAGATAAGCCATGACAAT
TTTGTGGAATCATATGGCATTGTAACCCGCAGCAAAAGTGTTGAAGGTGGGTACAGAATG
TACAGATACTCTAAAACGGAACATACACTTTGTCCTTCAGTTCAATAAGCTGATTGATAT
GTCAGCGAACTACTATTGGCGACAAACTGACAAGTCATTTGACATCAATGATAATTGTGA
TGGCATCACCAGTAGTAGTAGCCACCGTATCATGGAAATATCTTCTCCTCAACTCGTGGT
GACCTCTGAAGAAGATAACCATCAAACACTACAAGTTCCATCAGAGAAGGAGTATAAAGG
ACCTTCTAATCGACGTTTGCGACGGTTTTCGCTGAAAAAATTCCCATCCACTGGTGATAT
ACGAAAAATGAAAAACGAAGGTACGTTAATCATAATTTATACATGGCAACGGCCCGTACC
AGCGTTAAGCATGGCCACAGCTTCACAAAGTGGATATATGGACAGGAGAAACAAGAAGAA
AAAGTGGGAAAAACTTTGGTGCGTTCTNAACGACACATGCCTATTTTGTTATCATTCGCC
TCAATCTGAATTCACTCAAGACGCCGTCGTTCTTCGTGGTTATACTGTCTCCGCTGATAT
ATCAGATGTGCAAAAGGCGAAGTTTACTTTCAAACTAGATAAGAAGGGTCATCCTACCTA
CCATTTTCGATGTGACGATCATAAGACATTCATGCAATGGGTTTGCATGATCAAAAAAGA
ATCAAGCGTGGCCGTTTCGGAAGCAAGCGATAATGAAATTCTTCACAATTCCATGAAAAA
TTCCACTCAGACAACTTCACGAACTACGCAGCCGGCTAATAGCTCTAATCAGTCAATATC
ACCAGCGAATTCCCACCAGTCACTTTCTCGGAGGCACACGTCTGAGAATATATTTCGTTT
GAATCGTCGGGAGCACTTAGAACTGGAATTACAAAAAGAGAATTTACTGCGGGAAGTTTT
GGAACAACAAAAAGAAATCATAAAAGAACGTAACAGCATTTTGTCGTCGCCTTCTCCCGA
ACAGAGTCGGCCCTATTACGTTCCATTGGTTAGAGACTTGGACAGCCCGAAACCAACTAA
AAATGAAGTAATGGACAAATACGAAAGGGTAAAGGAAACGCAGCAAATGAAAATTCTGAA
GTCTTTGACACAGCTACACAGGCGAAGAAATTCAGTTCAACTGAAAATCGACCAGTTGTC
AAGAGATTCCAAACCAAAAAGACGATCGCGACATGCCAACAGATACGTCATCCACAGCAT
GGAAGCTAGACTCGACCTACTCAGATCAGAGCTGTCTGATATCGATCGTGATATACGCGA
GCACCAAGCAAGCAAAGAAGATATAATGGACAGTCTCAATCATAAACGTGACCTTGAAAT
CATGGTTTTGGACCAACAAGAATGCCTTGATATTGTGAGGCGCGGACAATCCAGTCCGTT
CCGCTACCAACAAGAACGAGGCCGCGGCCGCACAAGAAGACAATCAAATGTAACNGTATC
ATCCTCATCGTCGTACATGACAGAACATTTAACGTCCATCGACGAAACGACGACTGTGAT
TTCACATTCTGACTCATCATCGACTTCATCTGGATTGTATAACTCGTGTATAGAACTCAA
CACGTCAGAACCGATGCAAAAAGCTGCGGCTTCCACTCCGAGATGTAAAAGTTCCTGTCC
GTTTGAACATGTTAACGACGATGAAATCGACGGTTCAAAATTAATGAATCGGAGCAAATC
TAGCCAAAATATTGCTATATCAAAGGCGTTGTCTTGTTCGTCGGATGCAGATGAAATTTT
TGGCGTTGAAGGTGCTTTGAGTGATGATTTTCGAAGCTTGTCCGCTTCTTCCTACAGCGA
CTTGGATGGCGAGTGTAGAACGAGGGTGTCATCTAGTGATGAAAGTTTGGGAGCTAACAA
GAAGACTGATGAGGTTCGACCAGACGTCCTTGCCGAGATTGAAGATTTTGAGATCTTTTC
TAAAATGATGCTGCAGAGATTACACAGCGCGAAATGTTGATGATTTGAATGNACGTACCT
CAGTCCATACCGGACGACGGCGACGATTTCGCTGAATTTTTGACGAAGATGACGGAATAT
ACACTATGACGTCATCCCTCAGAGGACTTGATGCGGCTTCCGTTCGCCATGATGAAAATG
AAAGAAAGTTANCTACCTACGGTTACTCATTCCAAGACAACGGTGCTATACGTACTAAGA
CAATGTTCAAATTGTGGAAAGACTTACAGCTGACTGTACTATATAAATATATATTTGCGG
AGAGTTGGCGTTGAGATTTATAGATTTTAATCCAGAGACACGACATTNAAGAGTTTTTAG
ATGTAAACGGAAAGTCAGCCACAACGGTCACGTTGTCGCTTTGTTGTTATNTGACCCTGT
CTGGCAGAAGTGTCCAACCCAGCATAAATTGGCATTATGGCAATTGGCTTATTTGTATGC
AATGTGTCGCTTCAAATGTTACGGTGTGGATGTAGCAAGAAGTGGAAACTCTGTATGTAT
TTCATGCCGTGTAGGCCTTACAGGTGACACGCATGGCGTACAGTATATCCAATATCCATC
TAATGTTTTGGAATGTGAAAACTGCTTTGGGTCTCCTATCTTGATGTTAATGGGTATTTA
CATTCAAGGNTGTTACAGCTCACAGGTCGCTTTGGAGAATACTATCCAAATTAAGATAGT
TGAATTGTACTTGAAAAACCAATTTATGGGACCTTTGATACCGGCTCAGAATTCAGTTAG
AACATGTATTCGTGGCAGCCATTTGCGCCTGGATGCCATTCGAGCCATTACGTTGTCAAT
GCGGAGTGTTTTGCAATAACATTGGGTGTTGTCATACAACGCGGATTGTTTGGTTACTGC
ATCTATTCTTTTGTGTAGTTAATTAGTGATTCATTGACTATACTTATTACTTGAAACTAT
AGGTCAATAACATATCTTGTATTTTCTTGAGTTCATTTTTACATTCATTCCTATATTGTG
CAGTCTCACCTGTCGTGACCTTGCCATGACAAGAGATTAGCCTATTGCGATTTATTATTT
TTGTCTNAAAATGTACTATCCTTGCCTGCTACCAATAACATGGCTTAATTATTATGCTGC
TGATGATGACAATGATGATGTGGGATATTTTCTGTATACTAGGATTTTCGGCAATGAAAC
GCATCCTTCGTTTGTTCTGATTTTTGATGAATTTGGATTTTATATCATTTGGTCAATGAT
TGTCTCAAAGTGCCAATAAAAAGTAGACATCAGGGTAAA

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[100-221] 6.4E-20
ProSiteProfiles
PH_domain (IPR001849) - T[107-203] 11.281
SMART
PH_domain (IPR001849) - T[108-205] 1.7E-10
Pfam
PH_domain (IPR001849) - T[112-201] 4.1E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value