- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C3.297.v2....' >
- Clone 'cign067a09' >
- Transcript 'Boleac.CG.SB_v3.S242...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S242.g05790.01.t
Possible name(s)
GJA4; GJC1; GJC2
Gene model
Location
S242 [97,378 / 102,648]
Amino acid sequence
Length: 483
>Boleac.CG.SB_v3.S242.g05790.01.p
MSWHFLERWVEKANHHSTLVGKFWITFLIVCRIVLIASVGDRVYSDEQSEFKCNIAQPGC
SNVCFNKFSPISHLRFWSFQILLVATPTVMFVIYSGHDTKGAAQSAAGKKRKKGARKYAQ
ASRRKKVKNANANNNNNNNNNNNNKNKIRSSEKRFGKSKDKNAKRRTEHGLQQNLQQQDN
GCYMPDDNFQQQNNDSYTVQGFDREHQVALLNSHMPPVYEEHKWTKGXLNDRGPPKDNYF
MMLQRLRVEKTRLEKPRFTRHFHFYFATVFSRLLIEILFLXIQLLLFGFXVPSLYKCEEW
PCPNVVDCFISRPMEKTIFLQFMFGYSCIXVGLNFFEFLYXTWVYIFGRPKIVTKKADNG
DVNGQTKPNDQIDSESEDTDSVIDEEEDEVRARNRPGKGKRHYGDYSSRKKRDRKLASKK
RYYYRDKQMEEANAEFRRHELDIMMNDDDFQDDIAINASAGNDMTQMDFVSNGSAGAVDD
FNV
Nucleotide sequence
Length: 1,452
>Boleac.CG.SB_v3.S242.g05790.01.t
ATGTCGTGGCATTTTTTGGAACGATGGGTNGAGAAAGCCAATCATCATTCAACACTTGTC
GGGAAGTTCTGGATCACCTTTCTCATCGTTTGCAGAATAGTGCTCATTGCCTCAGTAGGT
GACAGGGTGTACAGTGACGAGCAAAGTGAATTTAAGTGCAATATTGCTCAGCCTGGTTGT
TCAAATGTTTGCTTCAATAAATTCTCCCCTATATCCCATTTGAGGTTTTGGAGCTTTCAA
ATTTTGCTTGTCGCGACGCCGACGGTCATGTTTGTTATCTATTCGGGACATGACACGAAG
GGTGCGGCTCAATCCGCAGCCGGAAAGAAGAGAAAGAAGGGCGCAAGAAAATATGCACAA
GCTAGTCGAAGAAAAAAAGTCAAAAATGCGAATGCTAATAATAATAATAACAACAATAAT
AATAACAACAACAAAAATAAAATCCGATCAAGTGAAAAACGATTCGGGAAGAGCAAAGAC
AAGAACGCTAAGCGAAGGACAGAACATGGTCTCCAACAAAATTTGCAGCAGCAGGATAAC
GGATGCTATATGCCTGACGATAACTTTCAACAACAAAATAATGATAGTTACACCGTCCAA
GGATTTGACAGAGAACATCAAGTAGCCCTCCTGAATTCACATATGCCACCCGTTTACGAA
GAACACAAATGGACGAAAGGGCNTTTGAATGATCGAGGTCCTCCAAAAGACAACTATTTT
ATGATGTTGCAAAGATTGAGAGTGGAAAAAACCCGCCTAGAGAAACCACGATTTACACGG
CATTTTCATTTTTATTTTGCCACTGTTTTCTCAAGATTGTTGATTGAAATACTTTTTCTG
GNTATTCAACTACTGCTGTTCGGCTTTNCCGTACCCTCTCTATATAAATGCGAAGAATGG
CCCTGTCCTAATGTCGTGGATTGTTTTATTTCGCGACCAATGGAGAAAACGATTTTCTTA
CAGTTTATGTTTGGGTATTCTTGTATATGNGTGGGTTTGAACTTTTTTGAATTTTTGTAT
NTCACATGGGTCTATATATTTGGTCGTCCGAAAATAGTCACTAAAAAAGCTGATAATGGG
GACGTAAACGGCCAGACGAAGCCAAATGATCAAATCGATTCGGAATCAGAAGATACGGAT
AGTGTGATTGACGAAGAGGAAGACGAAGTGCGTGCACGCAACAGGCCTGGAAAGGGAAAA
AGACACTATGGCGATTACAGTAGTCGCAAGAAACGCGATCGAAAGCTGGCATCAAAAAAA
CGATATTACTACCGAGATAAACAAATGGAAGAAGCGAACGCAGAATTTCGTCGTCATGAG
CTTGATATAATGATGAACGATGACGATTTTCAAGACGACATTGCGATCAATGCCAGCGCA
GGAAATGACATGACGCAAATGGATTTTGTTTCGAACGGTTCAGCCGGTGCCGTCGATGAT
TTCAATGTGTAA
| PANTHER |
Connexin (IPR000500) - T[1-429] 3.4E-99 |
| Gene3D |
Connexin_N_sf (IPR038359) - T[1-171] 3.7E-43 - T[211-352] 2.4E-30 |
| Pfam |
Connexin_N (IPR013092) - T[2-343] 1.7E-80 |
| PRINTS |
Connexin (IPR000500) - T[20-44] 5.0E-19 - T[51-73] 5.0E-19 - T[76-96] 5.0E-19 |
| SMART |
Connexin_N (IPR013092) - T[42-75] 8.1E-14 |
| SMART |
Connexin_CCC (IPR019570) - T[275-341] 8.8E-32 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[297-313] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 53.175 % | 143 | 2.81E-38 |
| CXA4_HUMAN | 49.474 % | 117 | 3.12E-29 |
| CXG2_HUMAN | 55.67 % | 135 | 6.44E-35 |