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- Transcript 'Boleac.CG.SB_v3.S246...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S246.g05874.01.t
Possible name(s)
NKTR; PPIB; PPIC
Gene model
Location
S246 [129,199 / 130,443]
Amino acid sequence
Length: 147
>Boleac.CG.SB_v3.S246.g05874.01.p
MDDMFCSPVCVFHIRSNKFNVYYNTLHGVFQGDKEVEIERADRTVTAEVTFEISFGKEVM
GNVTFGLFGXQCPKTVRNFVTLANPLRGKGEGYKGSKIHRIVRGFAVQGGDYTNNDGSGG
WSIYGRYFRDENFAINHFPFCLAMANA
Nucleotide sequence
Length: 441
>Boleac.CG.SB_v3.S246.g05874.01.t
ATGGATGATATGTTCTGCAGTCCGGTGTGCGTTTTCCACATACGGTCTAATAAATTTAAT
GTTTATTATAATACTTTGCATGGTGTATTTCAGGGCGATAAAGAAGTGGAGATTGAACGT
GCCGACCGAACCGTGACGGCTGAGGTNACTTTTGAAATAAGCTTCGGTAAAGAAGTAATG
GGTAACGTCACTTTCGGTCTCTTCGGCAANCAATGTCCCAAAACCGTGCGCAATTTCGTT
ACCCTCGCCAATCCACTTCGAGGAAAAGGAGAAGGATACAAAGGCAGTAAAATTCACCGA
ATCGTACGAGGATTCGCTGTTCAAGGTGGTGACTACACCAATAACGATGGCAGCGGTGGA
TGGAGCATATACGGGCGNTACTTCAGAGACGAAAATTTTGCAATAAATCACTTCCCATTC
TGTTTGGCTATGGCTAATGCA
| Gene3D |
Cyclophilin-like_dom_sf (IPR029000) - T[22-147] 1.8E-34 |
| PANTHER |
Cyclophilin-type_PPIase (IPR024936) - T[32-147] 7.5E-35 |
| PIRSF |
Cyclophilin-type_PPIase (IPR024936) - T[36-147] 2.9E-32 |
| SUPERFAMILY |
Cyclophilin-like_dom_sf (IPR029000) - T[42-147] 7.74E-30 |
| ProSiteProfiles |
Cyclophilin-type_PPIase_dom (IPR002130) - T[50-147] 20.198 |
| Pfam |
Cyclophilin-type_PPIase_dom (IPR002130) - T[57-147] 1.2E-17 |
| PRINTS |
Cyclophilin-type_PPIase_dom (IPR002130) - T[67-82] 2.6E-8 - T[98-110] 2.6E-8 - T[140-147] 2.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPIB_HUMAN | 46.512 % | 108 | 3.95E-30 |
| PPIC_HUMAN | 51.429 % | 103 | 1.6E-28 |
| NKTR_HUMAN | 45.631 % | 99.8 | 4.08E-25 |