- Transcript 'KH2012:KH.C2.450.v1....' >
- Molecular Tool 'Hedgehog2-MO (Imai 2009)' >
- Transcript 'Boleac.CG.SB_v3.S249...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S249.g05927.01.t
Possible name(s)
ZEB1; ZEB2; ZNF32
Gene model
Location
S249 [62,384 / 68,450]
Amino acid sequence
Length: 780
>Boleac.CG.SB_v3.S249.g05927.01.p
MFSSRKETHKSVSLNTPVARTGGSRTSEPFHNQEQLAHGVDSLLKHHEESLLRQDTIRVA
DHVETXGKDMRASSPKAFERPAEIQSANENNSNSXSEVSEPRMPSLAASMQLHNNNRDGM
DAKNIILQHYLNTLHEGAVDRNILRHDPVQCSRSGRSPPTFFPFGMNTMPNKLSPRSDSR
QSNAFSADLAEIFSNCRDRQPTLPFGMQSFSSPYSVLFQQHLYQLALASAAQNGRIEKDI
PARGRSQATQITSDQRGSSTSNDTQNEPLDLTAPKQLRTPKPDLLLPKEKPIWSPPPPYS
SVYGPVQSTVADIQSIANTAATLYHIQRLVQSGALPPTSLAMLMGNLAAYDFSGTGTKSS
DLSSQIFTRNNTPAFNPESMKPELSRYSERLQNHTTSHDAFVPRTSNAFSRDLGMRTVGN
LGEGLSPTMVPSGFIQGMFNRRGRPKKRPLDNTSSRNRFVGPFSSMDTLMHESSSKYARS
AFTGKPSPFHPANSTELSRMADHMKERLPPPNQMMYKCDICDKSFQKQSSLTRHKYEHTG
KRPHHCNVCPKSFKHKHHLIEHQRLHSGEKPYQCEKCGKRFSHSGSFSQHMNHRFPYCKQ
EDTVMQELRQQLKKSNVEGKVNSSNIIATFDQATVSKVSTDVNSQFNHKTEIKIEEEGIR
SAQFVDEKAIKRENVMLRIDQQNLSDTNDYLRPISRNSIGVQDSLTEVDSPTPGKEDTQT
ERSDDELDFSDKVLKSTAXESPSTCSSPDSVNSATITTPNSFLPTSRALAITXXNELKLH
Nucleotide sequence
Length: 3,230
>Boleac.CG.SB_v3.S249.g05927.01.t
ATGTTTTCTAGTCGCAAAGAAACCCATAAATCCGTAAGTTTAAATACTCCTGTTGCCCGC
ACTGGTGGATCAAGAACATCGGAGCCGTTTCACAACCAGGAACAATTAGCTCACGGAGTT
GACAGTCTCCTCAAGCATCACGAAGAATCTCTTTTACGACAAGACACAATTCGTGTAGCC
GATCACGTAGAAACTNCTGGAAAAGATATGAGAGCAAGTTCTCCGAAAGCTTTCGAAAGA
CCAGCAGAAATTCAGTCAGCGAATGAAAATAACTCAAACAGTNCATCTGAGGTCTCAGAG
CCCCGAATGCCAAGTCTTGCCGCCTCAATGCAACTGCACAACAACAACAGAGACGGAATG
GATGCAAAGAACATAATTTTGCAACACTATTTGAATACTTTACACGAGGGTGCCGTTGAC
CGAAACATTCTCCGACACGATCCCGTTCAGTGTTCACGCTCTGGTAGATCTCCGCCTACT
TTTTTCCCATTCGGAATGAACACCATGCCAAACAAATTGTCGCCAAGGTCTGATAGCAGG
CAATCAAATGCTTTTTCNGCTGACTTGGCTGAGATATTCAGCAACTGTCGTGACCGCCAA
CCGACGTTACCGTTCGGGATGCAATCCTTCTCATCGCCATATTCTGTTTTATTTCAACAA
CATCTTTACCAACTTGCGCTTGCTTCAGCTGCTCAAAACGGAAGGATTGAAAAGGATATA
CCAGCACGGGGAAGATCGCAAGCAACGCAAATAACGTCCGATCAAAGAGGCTCATCGACA
TCGAATGATACCCAAAACGAACCACTTGATTTAACAGCACCTAAACAACTACGGACCCCA
AAACCTGATTTATTGTTGCCAAAGGAAAAGCCTATTTGGAGCCCGCCGCCGCCATATTCT
TCAGTATACGGCCCTGTTCAAAGCACTGTTGCCGATATTCAATCAATAGCAAACACCGCA
GCGACACTGTATCACATTCAAAGGTTAGTGCAAAGCGGTGCCCTACCTCCGACCTCGCTT
GCAATGCTAATGGGAAATTTAGCTGCTTATGACTTTTCCGGCACAGGGACGAAATCCTCC
GACCTATCGTCACAAATTTTCACAAGAAACAATACTCCTGCATTCAATCCTGAATCGATG
AAACCGGAGTTGTCTAGATATTCTGAGCGGTTGCAAAATCATACCACAAGCCACGATGCG
TTCGTACCCAGAACCAGTAATGCATTTAGCAGAGATTTGGGGATGCGTACTGTTGGAAAC
TTGGGTGAAGGTCTATCTCCTACTATGGTCCCATCTGGATTTATTCAAGGAATGTTCAAT
AGACGTGGAAGGCCGAAGAAAAGACCGCTTGACAACACCAGCAGTCGCAATAGATTTGTA
GGACCATTCTCATCGATGGACACCTTAATGCATGAAAGTTCATCGAAGTATGCCCGCAGT
GCGTTTACAGGGAAACCATCGCCGTTTCATCCCGCCAACTCCACCGAACTGTCAAGGATG
GCGGATCATATGAAAGAACGCTTGCCACCTCCAAATCAGATGATGTATAAATGTGACATT
TGCGATAAATCTTTTCAAAAACAAAGTTCTTTAACGAGACATAAGTATGAACACACAGGT
AAAAGACCTCATCATTGTAATGTGTGTCCCAAATCGTTTAAGCACAAGCATCATTTGATT
GAACACCAAAGGCTGCACAGCGGTGAGAAACCTTACCAATGCGAGAAATGTGGAAAACGA
TTTTCTCATTCTGGCTCATTTTCGCAACATATGAATCATCGCTTTCCGTACTGTAAACAA
GAGGACACTGTAATGCAAGAATTGCGACAACAGCTCAAAAAGTCGAATGTAGAAGGAAAA
GTCAACTCATCAAATATCATTGCGACATTCGATCAAGCCACCGTGTCTAAAGTCTCAACG
GATGTCAACTCTCAATTCAATCATAAAACTGAAATCAAAATTGAAGAAGAGGGGATACGA
TCTGCACAATTTGTCGACGAAAAGGCTATAAAGCGTGAAAACGTCATGTTAAGGATAGAC
CAACAGAATTTGAGTGATACCAATGATTATTTAAGGCCCATTTCTCGCAATTCAATCGGT
GTTCAAGATTCATTAACAGAGGTGGATTCCCCAACACCAGGTAAAGAAGATACCCAAACA
GAAAGGAGTGATGATGAGCTTGATTTCTCAGACAAAGTATTGAAGTCAACAGCGTGNGAA
TCGCCGTCTACTTGCTCCTCACCTGATTCTGTGAATTCCGCAACAATCACAACTCCAAAC
AGTTTTCTACCAACAAGCCGCGCGCTTGCGATTACCNCANCAAACGAACTAAAACTTCAC
TAAATCGCTCAACACAGCACATGTGCATACAAAATCCTATTCACGTATATAGGTATTGTT
GTGCGTGGCGATAGACGCGTGTATAGTTCCTCTGAAGTCACAAATTTACGTGATATGTCG
CTCAAAAGGAGACGAGAGCAGAAGTGAAATCAGAATGCTGCGAGCCAACGCTTCGAAGGC
ATTACATTTGGCCTTCGATAGAAAACTTTGAAGCCTTTTTAAACACGGCAGCTCTGCAAC
CCGGTCTTGCCATTTTTAGTAGCTGTACAATTGCTAATATTGCTGCATGTATATTAATCT
TTGTCGTATCAAGATGAAGGGATAATTTAGGCCTATATGTCTTGTCCCATTCGCTATATT
ATTATATTTTGGCTTCTTTCAGTATATAGCCCTCTTTTTTATGTTATATTTCTACTGTTT
ATTGATATAGAATTGCTCNTTTGCATGTGTGTGAGTTTGCATGATAGAATGCTTTAAGAA
TTGTGTGTTGAAGTTGCATGTCTGCCTGATTTGTTTAAAAAATTTTAAAATACCAAAAAA
NCACGCCATTTTGGCAATGATATGAAGTTTTATACACTGTCAAATACGAATTCGAACGCT
ATTTTATAGAAATAACAACGTGTATCTTCAACCCTACCAAGTCGCACTGTGGTTCGATAT
TGCCGCCAGCTGCGTGATTCTTCAAAACTTTGTGGAAACCTGCCGTATCCAGAACAATAT
ATATTCTTAGATAGATGCAATGCATATACATTGGAACCACACCATATTCTGCTATAGATT
ACAGCATAAGCCTAATTCAACGTACTATCTTCATTGCATCTTTCGATATTATTCGCACTC
TATAATTTTGGGAAATTACAGGCTGATAACTCCCCCTCACAGCCCGAACT
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[514-547] 2.09E-8 - T[538-590] 9.9E-16 |
| SMART |
Znf_C2H2_type (IPR013087) - T[516-538] 5.1E-4 - T[544-566] 0.15 - T[572-593] 0.16 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[516-543] 15.708 - T[544-571] 15.625 - T[572-591] 9.951 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[518-538] . - T[546-566] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZEB2_HUMAN | 82.353 % | 172 | 2.38E-44 |
| ZEB1_HUMAN | 74.747 % | 176 | 1.35E-45 |
| ZNF32_HUMAN | 41.406 % | 95.5 | 1.18E-21 |