- Transcript 'Boleac.CG.SB_v3.S24....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S24.g05698.01.t
Possible name(s)
KIRREL2; KIRREL3; NPHS1
Gene model
Location
S24 [141,416 / 145,534]
Amino acid sequence
Length: 438
>Boleac.CG.SB_v3.S24.g05698.01.p
MRGQDIKSAGKAFPNAINSPPSAGSEEKLFTSSSHITLSTETLRNGSSVECIARQKALRF
PMTKAAVLNVLHPPNHPIISGVGSDPIRIGEXIEVKCVSDGGNPPAKITWVIGDDLYNGV
YQSSGMRAQSTLRYTSRKQDNGKYLKCIVNSTALPTSIEARERLEVYYPPDNIMIDCDPA
DGVEENNDITFTCQHTASNPIPTLEWLINGVKLPNRTSDSVGAVSFHTYTLTSEEEQQKI
AVTLRGVKRENTNLDIKCRARIPAIAYSREVTVHPKVNYPPRKVSVTIENPLNSPMINIH
PRNDSIASNAPRNRMTFIAGHTIRLSCEAKNGGQVRAIETSQVNVETAKAMDNSISDEFL
TSSSIEMDLKSTHNRGTVTCKASSAQYSSVTTSNVTLAVAFPPDTLRIDQFPQKAVAGNA
LSLTCETAASFPAATISW
Nucleotide sequence
Length: 1,317
>Boleac.CG.SB_v3.S24.g05698.01.t
ATGCGCGGTCAAGATATTAAATCAGCCGGCAAAGCGTTTCCGAACGCAATAAACAGTCCT
CCATCTGCCGGGAGTGAGGAAAAGCTATTCACCTCATCTAGTCACATAACACTATCGACC
GAAACCCTACGAAACGGATCCTCTGTTGAGTGTATTGCNCGTCAAAAGGCTTTGAGGTTT
CCTATGACAAAAGCCGCAGTCTTGAACGTTTTACATCCTCCAAATCATCCTATAATATCA
GGAGTTGGCTCAGATCCGATAAGAATTGGCGAGGNTATTGAAGTAAAATGCGTATCCGAC
GGAGGAAATCCACCGGCAAAAATTACTTGGGTCATAGGCGACGATTTGTACAACGGTGTT
TACCAAAGTTCCGGAATGAGAGCCCAGAGTACATTGCGATATACTTCAAGGAAACAGGAT
AACGGAAAATACTTGAAATGTATAGTCAACAGTACGGCGCTACCAACGTCCATAGAAGCT
CGTGAGCGATTAGAGGTGTATTATCCCCCAGATAATATCATGATTGATTGCGACCCTGCT
GACGGCGTTGAAGAGAACAATGACATTACATTCACGTGCCAACACACCGCCAGCAATCCG
ATTCCGACATTGGAATGGCTTATTAATGGCGTCAAACTTCCGAATAGAACAAGCGACAGT
GTTGGAGCAGTCTCGTTTCATACGTATACTTTGACCAGCGAAGAGGAACAGCAAAAAATC
GCAGTGACGTTACGAGGGGTCAAACGCGAGAACACAAATCTCGACATAAAATGCCGAGCT
CGCATCCCAGCAATTGCGTATAGTCGAGAGGTTACAGTACATCCGAAAGTTAATTATCCT
CCAAGAAAGGTGTCGGTGACAATCGAGAACCCGCTTAACTCGCCAATGATCAATATTCAT
CCACGGAACGATTCAATTGCATCAAATGCTCCCAGAAACAGAATGACCTTCATTGCCGGA
CATACAATACGGTTATCGTGTGAAGCCAAGAACGGTGGACAAGTAAGAGCGATCGAAACA
AGTCAAGTTAACGTCGAAACAGCCAAAGCCATGGATAATTCGATTTCTGATGAATTTCTC
ACCAGCTCCAGTATCGAGATGGATCTCAAATCGACTCACAATAGAGGGACTGTAACATGC
AAAGCCTCCAGTGCTCAATACTCGAGCGTAACTACTTCCAATGTTACCTTGGCGGTGGCG
TTTCCGCCAGATACATTGCGAATAGATCAATTCCCACAAAAGGCGGTTGCTGGAAATGCG
TTGAGTTTGACATGTGAGACGGCCGCAAGTTTCCCAGCAGCTACTATTTCTTGGTAA
| Gene3D |
Ig-like_fold (IPR013783) - T[9-76] 2.4E-5 - T[77-173] 4.0E-16 - T[178-285] 3.5E-10 - T[308-406] 2.1E-7 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[73-170] 7.1E-14 - T[169-281] 2.89E-9 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[74-159] 8.448 - T[170-272] 8.175 - T[295-396] 7.014 - T[403-438] 8.357 |
| Pfam |
CD80_C2-set (IPR013162) - T[93-154] 1.4E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NPHN_HUMAN | 25.4 % | 111 | 4.41E-26 |