- Clone 'AHC0AAA173YC07' >
- Clone 'cima878198' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boleac.CG.SB_v3.S255...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S255.g06089.01.t
Possible name(s)
HGF; LPA; PLG
Gene model
Location
S255 [65,796 / 86,353]
Amino acid sequence
Length: 1,614
>Boleac.CG.SB_v3.S255.g06089.01.p
MKRILLICFVATQTLGVNSQIQEQDCFDGSVTSYNGTLNATISGKTCQRWDSDSPHTPHY
RPLARDHNYCRNPDRDAKGAWCYTTDPATRWEYCDVKKCSQVTTTFPAETSHPLQTSSAS
FTSRARCQEPEECIEGHSARYVGTRSVTASGRTCQRWDATTPHQPTANHRPHDGKRHNYC
RNPDNDLVGTWCYTTDVNKRWEYCNITKCVEDSYLYWTSFDSTNSQALILSAHADPEVVR
RQMTSSKTFNTTTVVDSNETNSEYWALTSHPLRKQLYYTDYRQQYLAVWDINKGEERRYF
EGITHGIENLAIDWKTDNLYWTDSTFKWIMAADSHFKHYAVVYRPTPKQVPYGLTIHQTR
RYMIFSTYEAQRSKMVRTDLAGKDAVDLFIYPDVMDVTGITIDYEEDRLYWTDFNGYGGR
IMSSRLDGSNKTEHKYFRDSILWGLVTYRDFVYSTDVHRRHGVDGKGYYHLWFMSKWSTN
EYSYRLPTKPRGIAVLRGNEETAYRNDSNSGECDQNHGCDHVCLPRINSSSECACSLGYQ
LASDKRRCIYNDTQKINKITLDINRGYVFWSSKKTRSLYRANIDGKERLKIADVYAIRLA
VDPQTGNVFYVDEDSNSIVVSKGDGSFSKTIRTSNKTAEKNSMIGMITVDVKNKYIYWTQ
RFTDTGRLMRCKFDGSAEEVVLDGLKSPHATTVDYQTDKLYVVEAKAVRIFEVALSLLDT
ISNTSISGSNFRVYDIGQNFASPYIADFKLLGGIAYMGDSKNRGFRTFNFSSQVAPNFGP
EEFVEITTISIFKKSFYDDYIEPVPNPCSTNPCQGLCLALNANDSRCICGDGKADSDCVT
EKETDCIDGPSRLYVGTINQTVSGKTCQRWDVDKPHKPKRLPHDSIHHNYCRNPDLDLRG
TWCYTTDNNTLWEYCKISKCPDDSLVIWTSYNSSTESTFLFNVHADPEVVRQITDSKGSF
QVNIETGTNRSMTEYWALAAHYHKHLLYFSDYRSEYIATWNMKTKQEKKYFEGMAHGVES
LAYDWKTNNLYWTDSEFKWVMVSDDTFTYYAPIYRTAPNPPYGLAVHSVQRFLLFSTYKA
LDSKIIKTDLAGRNATVLWKFPSVFDVTGLAIDYTDDKLYWTDFTGYGGMVVSSTLDGKN
RTXHNYRGGSIFWGVAPYLEYLYVSDVHARYSRSGDRHYSVWILTKETKRVYRYTLAGKP
RGVAIYSHNEEYSDEASASLGECDAEHDCDHXCLPRINADRECVCSLGYHLDKSTNKCVP
QLVKDNYLLVADAGQGKVFQIPITNDKDQNNATSYSIVPLGSKWKAETVAVDHGQRFLYW
SDKKKSSVSRSSVDGSRYVQVATTYANSMIVDPHTGHLFFSDNERDSXTIVTTSVYQGLT
PIENASVHSVIISTKAPTNVYLPFRIYCILELVKDNYLLVADAGQGKVFQIPITNDKDQN
NATSYSIVPLGSKWKAETVAVDHGQRFLYWSDKKKSSVSRSSVDGSRYVQVATTYANSMI
VDPHTGHLFFSDNERDSIRISKGDGSTAKTIVKPAPFSNDTSNIRMIVQDIKYKYIYWTD
TYSKDGQGKVMRSRYDGSKKEVVLDKLNWPHAIAIDYKSDKSNVRCRSKRCVDL
Nucleotide sequence
Length: 5,133
>Boleac.CG.SB_v3.S255.g06089.01.t
GATGTTTTTTGCTTCCGGGGAACATCAGAAAATCGTACAAGTTTAGATCAGACCAAGTAT
AGGGCCTAATCATTGGCGAATATTGAATCATTGTGCGCAATCGTGCAGAACGTTGATATT
TCCGACAATATCCGCTCACCAGTCTTTTGGCGACAATTAAAACAAAAGCTTCTGAGTCTC
CTTTTAGCTTGTTAGCCAGTTTTGCCTGCTGCAGCCGCAGATCAGCTGCGTTTTACAAAA
CTAGGAAGATATAAGGATCCACAAAATAGGCTTCAAAACAGGATCAATATGAAAAGAATA
CTATTGATTTGCTTCGTGGCTACCCAAACTTTGGGCGTTAATTCTCAAATTCAAGAGCAA
GATTGTTTCGATGGCTCGGTCACCAGCTATAACGGAACATTGAACGCTACGATCAGCGGA
AAAACTTGCCAACGATGGGATAGTGACAGTCCGCATACACCACACTACAGACCACTTGCC
AGAGACCACAATTATTGCAGAAACCCAGATCGTGATGCCAAGGGGGCATGGTGTTACACA
ACTGATCCTGCCACAAGATGGGAATATTGCGACGTGAAAAAATGTTCACAGGTGACAACG
ACCTTCCCAGCGGAAACTAGTCACCCGTTGCAAACGTCTTCAGCCTCGTTTACATCGCGT
GCTCGGTGTCAAGAGCCGGAAGAGTGCATCGAAGGACACAGTGCGAGGTACGTTGGAACA
AGAAGTGTGACAGCTTCAGGAAGGACCTGCCAAAGATGGGATGCTACCACGCCACACCAA
CCAACAGCCAATCATAGACCACACGATGGAAAGCGGCACAATTATTGCAGAAATCCGGAC
AACGACTTGGTGGGCACATGGTGCTACACGACAGATGTAAATAAAAGATGGGAATACTGC
AACATAACAAAATGCGTGGAGGACTCGTACTTGTATTGGACAAGCTTTGACTCGACAAAT
TCTCAAGCCCTGATACTGAGTGCACACGCTGACCCTGAAGTTGTGAGGCGCCAAATGACT
TCTTCCAAGACATTCAACACAACCACGGTTGTTGATTCAAATGAAACAAATTCAGAGTAC
TGGGCATTGACATCTCACCCGCTCAGGAAACAGTTGTATTATACCGATTACAGGCAGCAG
TATCTTGCTGTTTGGGATATAAATAAAGGCGAAGAAAGGAGATATTTCGAAGGAATTACT
CATGGCATTGAAAATCTCGCTATTGACTGGAAAACGGATAACCTTTATTGGACCGATTCG
ACATTCAAATGGATCATGGCGGCAGATAGTCACTTCAAACATTACGCAGTAGTATATCGA
CCAACACCCAAGCAGGTGCCATACGGATTGACTATTCATCAAACGCGCAGATATATGATA
TTTTCTACATACGAAGCACAGAGGTCAAAAATGGTTCGAACCGACCTAGCGGGTAAAGAC
GCGGTGGATCTTTTCATATATCCAGACGTAATGGACGTCACCGGGATCACAATCGACTAT
GAAGAAGACAGGTTATATTGGACTGACTTCAATGGCTATGGAGGCAGAATAATGAGCTCA
CGGCTTGACGGAAGCAACAAAACGGAACACAAATACTTCAGAGACAGCATACTCTGGGGT
TTAGTCACTTATCGTGATTTTGTCTACTCAACCGATGTCCATAGACGACATGGTGTGGAT
GGGAAAGGTTATTATCATCTCTGGTTTATGTCCAAGTGGTCAACGAACGAATACAGCTAT
CGGTTACCAACAAAACCACGTGGTATTGCAGTCTTACGAGGAAATGAAGAAACGGCATAC
AGAAATGATTCGAATTCGGGGGAATGTGATCAAAATCATGGATGCGACCATGTTTGTCTT
CCCAGAATAAATTCTAGCAGCGAATGTGCCTGCTCTCTGGGATACCAACTAGCCTCTGAT
AAAAGACGTTGCATCTATAACGATACACAAAAAATAAACAAGATAACATTAGACATCAAC
CGCGGCTACGTGTTCTGGTCAAGCAAAAAGACTCGCTCGCTGTACAGAGCGAATATCGAT
GGCAAAGAGCGACTGAAAATTGCAGATGTTTACGCTATCCGTTTAGCAGTTGATCCTCAG
ACCGGCAATGTATTCTATGTCGATGAAGATTCAAATTCAATTGTAGTTTCGAAAGGAGAT
GGATCCTTCAGCAAGACAATCAGGACGTCGAATAAAACCGCTGAAAAAAATTCAATGATT
GGAATGATAACCGTTGACGTTAAAAATAAATATATATACTGGACACAGCGGTTCACAGAT
ACCGGCAGATTGATGAGATGTAAATTCGATGGATCCGCAGAAGAAGTAGTGTTGGACGGA
CTGAAATCTCCTCACGCGACAACGGTGGATTACCAAACGGACAAATTGTATGTAGTTGAA
GCGAAAGCAGTTAGGATCTTCGAGGTTGCACTTTCGCTTTTGGATACCATCAGCAATACC
TCGATATCCGGTTCAAATTTTCGTGTCTACGACATCGGACAGAATTTTGCATCGCCATAT
ATCGCTGATTTCAAACTACTTGGAGGCATTGCATACATGGGCGACAGCAAAAATCGTGGC
TTTCGAACATTCAACTTCTCTTCACAAGTAGCGCCTAATTTCGGGCCAGAAGAGTTCGTC
GAGATCACAACAATATCAATTTTCAAGAAGTCGTTCTACGACGATTACATTGAGCCTGTC
CCTAATCCATGTTCTACAAATCCCTGTCAAGGATTGTGCCTGGCGTTGAACGCAAATGAT
AGTCGGTGCATATGTGGAGACGGAAAGGCGGATTCAGACTGCGTTACAGAGAAAGAAACA
GATTGCATAGACGGCCCAAGTCGGTTGTACGTCGGCACAATTAATCAAACAGTTTCCGGG
AAGACATGTCAGAGATGGGATGTTGATAAACCGCACAAACCAAAACGCCTTCCACATGAT
TCAATACATCATAATTATTGCAGAAATCCAGATCTTGATTTGAGAGGCACGTGGTGCTAT
ACAACAGATAATAATACCCTATGGGAATATTGTAAAATTTCAAAGTGTCCGGATGACTCA
TTGGTGATATGGACAAGCTACAACTCATCCACAGAGAGTACATTTTTATTCAACGTCCAC
GCTGATCCAGAAGTTGTGCGACAAATAACAGATTCCAAAGGATCTTTTCAAGTAAACATT
GAAACCGGGACAAATCGTTCAATGACTGAATACTGGGCGTTGGCTGCGCATTACCACAAG
CATTTGCTCTACTTCAGCGACTACAGGTCAGAATACATCGCCACTTGGAATATGAAGACA
AAGCAAGAAAAGAAATATTTTGAGGGGATGGCCCATGGAGTTGAAAGTCTCGCATATGAT
TGGAAAACAAATAATCTGTATTGGACCGACTCGGAATTTAAATGGGTCATGGTTTCAGAC
GACACTTTCACATACTACGCACCGATTTACAGAACAGCACCGAATCCACCTTATGGTTTA
GCAGTCCACTCTGTGCAAAGGTTTCTTCTCTTCTCTACATACAAAGCACTGGATTCTAAA
ATCATCAAGACCGATTTAGCTGGACGAAATGCAACTGTTCTATGGAAATTCCCTAGCGTA
TTTGACGTCACTGGACTTGCTATCGACTATACTGATGACAAGTTATACTGGACCGACTTC
ACCGGATATGGCGGTATGGTAGTAAGCTCAACATTAGACGGGAAAAACCGAACTNAACAC
AATTACAGAGGAGGATCAATATTCTGGGGGGTAGCCCCTTATTTGGAATATTTGTACGTC
AGCGACGTCCATGCTAGATACAGCAGATCAGGCGATCGTCATTATTCAGTATGGATACTT
ACAAAAGAAACAAAGCGGGTGTATCGGTATACCTTGGCTGGCAAACCACGTGGGGTTGCC
ATTTACAGTCATAATGAGGAATATTCAGACGAAGCTTCCGCCTCACTCGGGGAATGCGAC
GCTGAACACGATTGTGACCACATNTGTCTACCAAGGATTAACGCCGATAGAGAATGCGTC
TGTTCACTCGGTTATCATCTCGACAAAAGCACCAACAAATGTGTACCTCAGCTCGTCAAA
GACAACTATCTTCTAGTAGCTGATGCTGGGCAAGGGAAAGTATTTCAGATACCAATCACT
AATGATAAGGATCAAAACAATGCAACTTCATACAGTATTGTACCTTTGGGTTCTAAATGG
AAAGCAGAAACGGTGGCTGTCGACCACGGCCAAAGGTTTCTGTATTGGTCTGATAAGAAA
AAATCATCAGTGAGCCGGTCATCGGTAGACGGGAGCAGATACGTTCAAGTTGCAACCACC
TACGCCAATAGCATGATTGTTGATCCGCATACCGGCCATTTGTTTTTCTCCGATAATGAA
CGAGACTCTNACACGATTGTGACCACATCTGTCTACCAAGGATTAACGCCGATAGAGAAT
GCGTCTGTTCACTCGGTTATCATCTCGACAAAAGCACCAACAAATGTGTACCTCCCATTC
CGTATCTATTGCATTTTAGAGCTCGTCAAAGACAACTATCTTCTAGTAGCTGATGCTGGG
CAAGGGAAAGTATTTCAGATACCAATCACTAATGATAAGGATCAAAACAATGCAACTTCA
TACAGTATTGTACCTTTGGGTTCTAAATGGAAAGCAGAAACGGTGGCTGTCGACCACGGC
CAAAGGTTTCTGTATTGGTCTGATAAGAAAAAATCATCAGTGAGCCGGTCATCGGTAGAC
GGGAGCAGATACGTTCAAGTTGCAACCACCTACGCCAATAGCATGATTGTTGATCCGCAT
ACCGGCCATTTGTTTTTCTCCGATAATGAACGAGACTCTATCAGGATATCAAAAGGAGAC
GGAAGTACGGCAAAGACGATCGTGAAACCAGCTCCGTTCTCAAATGACACTTCAAATATT
AGGATGATTGTTCAAGATATCAAATACAAATATATTTACTGGACGGACACATATTCTAAA
GACGGTCAAGGAAAAGTGATGAGAAGTAGATATGATGGATCTAAAAAAGAAGTGGTTTTG
GACAAACTAAACTGGCCTCATGCTATTGCAATCGATTACAAAAGTGACAAATCGAATGTA
CGTTGCCGAAGCAAAAGATGCGTTGATCTATGA
| Gene3D |
Kringle_sf (IPR038178) - T[6-106] 4.0E-30 - T[107-216] 2.0E-28 - T[845-925] 8.3E-24 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[23-105] 1.91E-28 - T[126-216] 1.47E-26 - T[826-926] 8.22E-26 |
| SMART |
Kringle (IPR000001) - T[24-101] 2.0E-33 - T[131-211] 4.9E-27 - T[844-922] 1.2E-25 |
| ProSiteProfiles |
Kringle (IPR000001) - T[25-99] 22.945 - T[132-209] 22.774 - T[845-920] 21.326 |
| Pfam |
Kringle (IPR000001) - T[26-99] 1.4E-20 - T[133-209] 3.3E-20 - T[846-920] 1.3E-19 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[69-82] . - T[179-192] . - T[890-903] . |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[213-219] 4.494 - T[274-316] 7.116 - T[317-360] 8.717 - T[361-406] 4.378 - T[407-431] 8.276 - T[566-588] 7.511 - T[606-648] 5.724 - T[654-697] 10.62 - T[985-1027] 6.049 - T[1028-1070] 8.184 - T[1071-1116] 4.355 - T[1117-1141] 7.163 - T[1316-1336] 8.184 - T[1466-1486] 8.184 - T[1506-1532] 6.327 - T[1554-1599] 12.941 |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[217-550] 1.1E-45 - T[551-844] 9.7E-39 - T[929-1260] 3.0E-43 - T[1262-1376] 5.3E-9 - T[1412-1604] 1.7E-27 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[252-296] 47.0 - T[297-339] 1.8 - T[387-431] 4.4E-6 - T[546-588] 1.4E-4 - T[589-628] 27.0 - T[634-678] 0.15 - T[680-720] 150.0 - T[965-1007] 33.0 - T[1008-1048] 3.3 - T[1096-1141] 0.0092 - T[1296-1338] 1.5 - T[1446-1488] 1.5 - T[1489-1528] 10.0 - T[1529-1580] 0.48 |
| SMART |
EGF-like_dom (IPR000742) - T[512-549] 0.0072 - T[807-839] 1.1 - T[1222-1259] 0.075 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[533-548] . |
| Pfam |
DUF5050 (IPR032485) - T[555-703] 1.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PLMN_HUMAN | 38.86 % | 142 | 4.01E-34 |
| APOA_HUMAN | 43.128 % | 156 | 7.86E-38 |
| HGF_HUMAN | 40.513 % | 132 | 3.87E-31 |