- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1058031-1067676.13590.t
Possible name(s)
TAF5; TAF5L; WDR5
Gene model
Location
R0 [1,058,030 / 1,067,676]
Amino acid sequence
Length: 629
>Cisavi.CG.ENS81.R0.1058031-1067676.13590.p
MMKRSRTEHIQNAVLNYLKHRNYTDSETTFKQNFKFEETLQEMTTRVLRSHAVSNTDSIS
FSVGCLDEYFLSFQDLKTFVEKLSKQQKESKLKDILFPIFVQSFFELLLADRSTECRAYL
RRFSGLFSQSHQLVVKQLESLSIPLDQSNFDLISGIRKEHEKVVLSDNDQSSLKTFLKTQ
DNLLLLKIINDRIQILDPELDDQLNLVNKDFAKKDSSPHKAQPSTAPQAKVKVTPLKTRA
QDLQPIIISPPSVPTTTTVTPTKPSIAPPVDTMLSDLTIEDARKVIDAVRNSPPTIKELS
LVRFNAEGLIHATPSNDHSFISTGFENSTIKLWRQGVRVPDSRSSLPDVSHVNLGCDDLE
DVKERLTQKTQRDIAAINDERVVTLRGHSGPVYDSCFTSDNRFLLSCAEDSTVRLWDLQD
MRNKVLYEGHNQPVWCIGMSAYDLYFATGSADHTARLWSVDRTFPLRSFAGHQDSVEAVA
FHGNCSYLATADRVVRVWDVNSGKSVRVMTGHWAPVMSLAFSSNGRMLASAGADYRVRLW
DVASGSLMKEMRAHTDTVYSLAFNYDGSLLASCGADSSVYCWNTASIQATGDQKNQHLVA
QWSLNASMNNLLKLNFISNNKLFCYGNVL
Nucleotide sequence
Length: 2,063
>Cisavi.CG.ENS81.R0.1058031-1067676.13590.t
TGCAGGTACCAGTTTTGCATACGTAGCGAGTACCAATTGTAGGTCAAGGCTGTAGACGAC
ATTTTTTAAATATAATTAAACTGCACTAATGACGTGGTAAAACATATGATGAAACGCTCA
CGAACGGAACACATACAAAACGCCGTGTTGAATTATTTAAAGCATCGGAATTATACAGAC
TCGGAAACAACTTTCAAACAGAACTTCAAATTTGAGGAAACCTTGCAAGAAATGACCACT
AGGGTCCTTCGAAGCCATGCGGTATCAAACACAGACAGCATTTCGTTTTCTGTTGGTTGC
CTTGATGAATATTTCCTTTCTTTTCAAGATCTCAAAACCTTTGTAGAAAAATTAAGTAAA
CAACAAAAAGAATCAAAACTGAAAGATATTCTATTTCCAATATTCGTCCAATCATTTTTC
GAACTCTTGTTGGCTGATCGGTCAACCGAATGCAGAGCATATTTACGTCGATTTTCTGGA
CTTTTTAGCCAATCACACCAGCTTGTTGTTAAGCAACTTGAAAGCTTAAGCATCCCTCTT
GATCAGAGTAATTTTGACCTGATAAGTGGGATTCGCAAGGAGCACGAGAAGGTGGTTTTA
AGTGACAATGATCAGTCAAGTTTAAAAACCTTCCTTAAAACCCAAGACAACCTTTTACTC
TTAAAAATAATCAACGATAGAATTCAAATATTAGACCCAGAGTTAGATGACCAATTAAAT
TTGGTCAACAAAGATTTTGCCAAAAAAGATTCTTCCCCACACAAAGCTCAACCCAGTACT
GCCCCTCAAGCCAAGGTTAAAGTAACCCCGCTAAAAACCCGAGCTCAGGATCTCCAACCA
ATTATAATCAGTCCTCCCTCCGTTCCCACGACGACAACCGTCACCCCCACCAAACCCTCA
ATAGCGCCTCCAGTGGATACTATGCTCAGTGACCTCACAATCGAAGACGCTCGGAAAGTA
ATCGACGCCGTAAGGAATTCACCTCCAACTATTAAGGAGCTTTCACTTGTCAGGTTCAAT
GCTGAAGGGTTGATCCACGCCACCCCATCTAACGACCACAGTTTCATATCCACAGGATTT
GAAAACTCCACCATAAAGTTATGGAGACAAGGAGTGCGGGTTCCGGACTCCCGTTCCTCC
CTCCCTGACGTCTCCCACGTCAACCTCGGCTGCGACGATCTCGAGGATGTGAAGGAGAGG
TTGACGCAGAAGACTCAGCGCGACATCGCCGCGATAAACGACGAGCGAGTCGTGACGTTG
CGCGGACACAGCGGCCCTGTGTACGATTCGTGTTTCACAAGCGACAATCGGTTCCTTCTC
TCTTGTGCCGAAGATTCGACAGTGCGTTTGTGGGATCTTCAGGATATGAGGAACAAAGTT
CTATATGAAGGACACAACCAACCCGTCTGGTGCATTGGAATGAGTGCATACGATCTTTAT
TTCGCCACTGGTTCCGCTGACCACACAGCCCGGTTGTGGTCAGTTGATCGGACATTCCCC
CTCCGGTCATTCGCCGGTCACCAGGACAGCGTGGAAGCCGTCGCATTCCACGGGAACTGT
AGTTACCTAGCAACTGCTGACCGAGTGGTGAGGGTGTGGGACGTGAATAGCGGGAAGTCT
GTTCGGGTGATGACCGGCCACTGGGCGCCAGTGATGAGCTTGGCGTTCTCGAGCAATGGA
CGGATGTTGGCAAGTGCTGGGGCTGATTACAGGGTTCGACTGTGGGACGTCGCATCTGGG
AGTTTAATGAAGGAGATGCGAGCGCACACCGACACCGTGTATTCACTGGCTTTCAACTAC
GATGGCTCTCTACTGGCATCGTGCGGCGCCGATAGTTCGGTGTATTGTTGGAATACTGCA
TCCATCCAAGCCACAGGGGACCAGAAGAATCAACACTTGGTAGCGCAATGGAGTCTTAAC
GCTTCAATGAACAATTTGTTAAAATTGAATTTCATATCAAATAATAAATTATTTTGTTAC
GGGAACGTTTTGTAATGTGTGTTTCAGTCATAACGTGTCTTACTCTGCAATTTCTTGATT
ATTTTTTAAAATAAAAAACATGG
| ProSiteProfiles |
LisH (IPR006594) - T[6-38] 7.522 |
| Gene3D |
TFIID_NTD2_sf (IPR037264) - T[45-197] 1.8E-18 |
| SUPERFAMILY |
TFIID_NTD2_sf (IPR037264) - T[53-195] 2.62E-22 |
| CDD |
TFIID_NTD2 (IPR007582) - T[66-195] 6.19102E-22 |
| Pfam |
TFIID_NTD2 (IPR007582) - T[68-192] 2.0E-18 |
| SMART |
WD40_repeat (IPR001680) - T[295-334] 48.0 - T[378-417] 1.8E-9 - T[420-459] 6.5E-5 - T[462-499] 4.4E-5 - T[502-541] 7.0E-8 - T[544-583] 2.4E-9 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[312-337] 1.41E-64 - T[379-594] 1.41E-64 |
| Pfam |
WD40_repeat (IPR001680) - T[383-417] 2.2E-6 - T[427-459] 2.1E-4 - T[465-499] 1.5E-5 - T[503-541] 1.5E-7 - T[546-583] 1.1E-5 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[385-426] 14.452 - T[427-468] 11.845 - T[469-508] 11.511 - T[509-550] 16.357 - T[551-592] 13.015 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[385-592] 51.544 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[404-418] 5.6E-7 - T[446-460] 5.6E-7 - T[528-542] 5.6E-7 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[404-418] . - T[486-500] . - T[528-542] . |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[465-627] 2.4E-42 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 28.641 % | 107 | 1.37E-25 |
| TAF5_HUMAN | 32.163 % | 247 | 3.92E-72 |
| TAF5L_HUMAN | 34.537 % | 339 | 1.04E-108 |