- Transcript 'KH2012:KH.C2.686.v1....' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1645747-1662899.15371.t
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
R0 [1,645,746 / 1,662,890]
Amino acid sequence
Length: 754
>Cisavi.CG.ENS81.R0.1645747-1662899.15371.p
SEAELNTRKLVTQMNRKKKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILSDK
DVVAMARTGSGKTAAFLIPMFEKLQVTQSGAGARALLLSPTRELALQTFKFVKELGKYTS
LRTACILGGDSMSEQFSAMHENPDVIIATPGRLMHVLVEMELRLSNMHYVVFDEADRLFE
LGFQEHLREILRRLPEDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKLA
FLHLREDDKLPILIHLLRNVFKETEQSVVFVPTKHHVEYVKDVLQLLGMSCSYVYSSLDQ
TARKINIAKFRNKKTMVLIVTDVAARGLDIPMLDNVVNYSFPAKSKLFVHRVGRVARAGR
TGTAYSLVCQDELAYAIDLHLFLGRPLNFAKSGHTYQVWDNVYGAVSQRVVDEEQATLEN
FRKNSTLQELLKISQNAYNEPAHKQCISIPNSIYCASKYTYIYIFSDKSEEARLNLLSSV
RQYKPNSTIFEIGATTKSSGAVVMKKTRKRNMKFVELHREKVKKLSEKNEQEFSKPEIND
TDEKPIEEETLKSAFTTIVRPSNKMREFSESKKKKKRRASNFKDNDFYIDYKPKDYNTEA
GLSIGESRTNFAKEASNLTLDLIGDEDKMLRQQKLQQKVWDRKKKRFVNAQDSSGLGKKK
IRTESGAVISSTYKKNIYQEWKKKTKLNDRNEDSHRSDGTSGRWQSGKRNNTVGKQQNSK
SKVKSELKRPEQILKQRKLQAQKKKNRQNRGRKQ
Nucleotide sequence
Length: 2,442
>Cisavi.CG.ENS81.R0.1645747-1662899.15371.t
GAACTGCTTGCTGATGAAAAGTTCGCAGGAAAATTTAACATAAACATGAAAAAAGAAGAC
ATTCCATCGGATAGCGAGGGGGAGGTTGATTTAGATATTGAACCATCCAGTTCCACCACA
AAGAAGGGCGGACAGGGCGACATCAATGAGTTGTTGTCCATCCTGGATGATGGCTACACC
TCTGAGGCGGAACTTAATACGAGGAAACTCGTCACTCAAATGAATCGTAAAAAAAAGAAA
TCTGGAGGTTTCCAGTCAATGGGTTTATCCCATTCAGTATTCAAAGGTGTAATTCGAAAA
GGTTACAAAGTGCCAACACCCATTCAGAGAAAGTGTATACCTCTTATTTTGAGCGATAAA
GATGTGGTAGCAATGGCGCGGACTGGCAGTGGGAAAACTGCTGCGTTTCTTATTCCCATG
TTCGAAAAGTTACAAGTCACCCAAAGTGGAGCAGGTGCAAGGGCATTGCTGCTGTCACCT
ACCAGGGAGCTTGCTCTGCAGACTTTCAAGTTTGTCAAAGAGCTTGGAAAGTACACATCC
CTACGAACGGCTTGTATTTTGGGGGGTGACAGTATGAGCGAGCAGTTTTCTGCGATGCAT
GAAAATCCGGATGTAATTATCGCTACCCCTGGACGACTAATGCATGTGCTCGTGGAAATG
GAACTGCGATTGTCCAATATGCACTACGTGGTGTTTGATGAAGCTGATCGGTTATTTGAG
CTGGGTTTTCAAGAGCATCTTCGTGAAATTTTGCGCCGGTTACCTGAAGATCGTCAGACT
TTGTTATTCTCTGCCACTCTTCCGAAACAACTAGTGGAATTCGCAAAAGCAGGTTTAAAC
GACCCTACACTGGTTAGACTCGATCTCGATTCAAAATTAAGTGATCAACTAAAGTTAGCC
TTCCTCCATTTGCGGGAAGATGACAAACTTCCAATTCTTATTCATCTTCTCCGCAATGTG
TTCAAAGAAACCGAGCAATCAGTCGTCTTTGTACCAACCAAACATCATGTAGAATATGTC
AAGGATGTATTACAACTGCTGGGCATGAGCTGCTCTTACGTTTACAGCAGCCTCGACCAG
ACGGCTCGGAAAATTAACATTGCAAAGTTCCGGAACAAGAAGACAATGGTGTTGATTGTT
ACGGATGTGGCAGCGAGAGGACTTGACATTCCGATGTTGGATAACGTGGTCAATTACTCC
TTTCCTGCCAAATCTAAACTTTTTGTCCACAGAGTGGGCCGGGTAGCGAGAGCGGGTCGT
ACGGGAACTGCTTACTCCCTCGTGTGTCAGGATGAGCTTGCTTACGCCATTGATCTACAT
CTTTTTCTTGGTCGACCGTTAAACTTCGCAAAATCCGGACACACATACCAGGTTTGGGAC
AACGTATACGGGGCAGTGTCGCAGAGAGTGGTGGATGAAGAACAAGCCACTCTGGAAAAC
TTTAGGAAAAACAGCACCTTGCAAGAGCTGCTTAAAATCTCCCAAAATGCGTACAATGAA
CCAGCACATAAACAATGCATCTCGATTCCAAATTCTATATATTGTGCATCTAAGTATACT
TATATCTATATATTTTCTGACAAATCTGAAGAGGCCAGGTTGAATTTATTGTCAAGTGTT
CGTCAATATAAACCAAATTCTACGATTTTTGAAATTGGGGCAACCACGAAAAGCTCTGGG
GCTGTTGTGATGAAGAAAACGCGGAAACGAAACATGAAGTTTGTCGAACTGCACCGGGAA
AAAGTGAAAAAACTAAGCGAGAAAAATGAACAAGAATTTTCAAAACCGGAAATTAACGAT
ACCGATGAAAAACCCATTGAAGAAGAAACTTTGAAGAGCGCATTTACTACAATAGTGCGA
CCTAGCAACAAAATGAGAGAATTTTCAGAGTCGAAAAAAAAGAAAAAAAGAAGAGCTTCA
AATTTTAAAGACAACGATTTTTATATTGACTACAAGCCAAAGGACTATAACACTGAAGCT
GGTTTGAGCATAGGGGAAAGTCGAACGAACTTTGCGAAAGAAGCATCCAATCTTACTCTG
GATCTTATTGGAGATGAGGACAAAATGCTTCGGCAGCAAAAATTGCAACAAAAGGTTTGG
GATAGGAAGAAAAAGCGATTTGTAAATGCCCAGGATTCTTCGGGATTGGGAAAGAAGAAG
ATCAGGACCGAAAGTGGAGCAGTCATCTCCTCCACATACAAGAAGAACATCTACCAGGAG
TGGAAGAAGAAAACGAAATTGAACGATCGGAATGAAGATTCCCATCGAAGTGATGGCACC
AGTGGAAGATGGCAATCTGGAAAAAGAAACAATACAGTTGGAAAGCAACAAAACTCAAAA
TCGAAAGTTAAATCTGAACTAAAGCGACCAGAACAGATTTTAAAACAACGTAAATTGCAA
GCGCAAAAGAAGAAAAATCGACAAAATAGAGGAAGAAAACAA
| PANTHER |
DDX54/DBP10 (IPR033517) - T[3-637] 2.4E-159 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[22-50] 9.745 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[41-237] 1.4E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[46-211] 1.3E-50 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[53-225] 32.697 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[92-377] 1.67E-66 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[171-179] . |
| CDD |
Helicase_C (IPR001650) - T[246-367] 2.57206E-32 |
| Pfam |
Helicase_C (IPR001650) - T[249-359] 2.7E-22 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[252-404] 17.57 |
| SMART |
Helicase_C (IPR001650) - T[278-359] 1.0E-23 |
| ProDom |
DBP10_C (IPR012541) - T[611-693] 3.0E-14 |
| SMART |
DBP10_C (IPR012541) - T[621-684] 1.6E-26 |
| Pfam |
DBP10_C (IPR012541) - T[621-684] 8.2E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX46_HUMAN | 36.872 % | 248 | 4.03E-70 |
| DDX27_HUMAN | 37.853 % | 257 | 1.58E-74 |
| DDX54_HUMAN | 50.512 % | 723 | 0 |