- Clone 'cien42709' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- EST 'AHC0AAA225YO24_RM1' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1645747-1662899.15373.t
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
R0 [1,645,763 / 1,662,890]
>Cisavi.CG.ENS81.R0.1645747-1662899.15373.p
TSEAELNTRKLVTQMNRKKKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILSD
KDVVAMARTGSGKTAAFLIPMFEKLQVTQSGAGARALLLSPTRELALQTFKFVKELGKYT
SLRTACILGGDSMSEQFSAMHENPDVIIATPGRLMHVLVEMELRLSNMHYVVFDEADRLF
ELGFQEHLREILRRLPEDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKL
AFLHLREDDKLPILIHLLRNVFKETEQSVVFVPTKHHVEYVKDVLQLLGMSCSYVYSSLD
QTARKINIAKFRNKKTMVLIVTDVAARGLDIPMLDNVVNYSFPAKSKLFVHRVGRVARAG
RTGTAYSLVCQDELAYAIDLHLFLGRPLNFAKSGHTYQVWDNVYGAVSQRVVDEEQATLE
NFRKNSTLQELLKISQNAYNEPAHKQCISIPNSIYFFNVFVLIILGNSSLYESSDKSEEA
RLNLLSSVRQYKPNSTIFEIGATTKSSGAVVMKKTRKRNMKFVELHREKVKKLSEKNEQE
FSKPEINDTDEKPIEEETLKSAFTTIVRPSNKMREFSESKKKKKRRASNFKDNDFYIDYK
PKDYNTEAGLSIGESRTNFAKEASNLTLDLIGDEDKMLRQQKLQQKVWDRKKKRFVNAQD
SSGLGKKKIRTESGAVISSTYKKNIYQEWKKKTKLNDRNEDSHRSDGTSGRWQSGKRNNT
VGKQQNSKSKVKSELKRPEQILKQRKLQAQKKKNRQNRGRKQ
>Cisavi.CG.ENS81.R0.1645747-1662899.15373.t
AAAGTTCGCAGGAAAATTTAACATAAACATGAAAAAAGAAGACATTCCATCGGATAGCGA
GGGGGAGGTTGATTTAGATATTGAACCATCCAGTTCCACCACAAAGAAGGGCGGACAGGG
CGACATCAATGAGTTGTTGTCCATCCTGGATGATGGCTACACCTCTGAGGCGGAACTTAA
TACGAGGAAACTCGTCACTCAAATGAATCGTAAAAAAAAGAAATCTGGAGGTTTCCAGTC
AATGGGTTTATCCCATTCAGTATTCAAAGGTGTAATTCGAAAAGGTTACAAAGTGCCAAC
ACCCATTCAGAGAAAGTGTATACCTCTTATTTTGAGCGATAAAGATGTGGTAGCAATGGC
GCGGACTGGCAGTGGGAAAACTGCTGCGTTTCTTATTCCCATGTTCGAAAAGTTACAAGT
CACCCAAAGTGGAGCAGGTGCAAGGGCATTGCTGCTGTCACCTACCAGGGAGCTTGCTCT
GCAGACTTTCAAGTTTGTCAAAGAGCTTGGAAAGTACACATCCCTACGAACGGCTTGTAT
TTTGGGGGGTGACAGTATGAGCGAGCAGTTTTCTGCGATGCATGAAAATCCGGATGTAAT
TATCGCTACCCCTGGACGACTAATGCATGTGCTCGTGGAAATGGAACTGCGATTGTCCAA
TATGCACTACGTGGTGTTTGATGAAGCTGATCGGTTATTTGAGCTGGGTTTTCAAGAGCA
TCTTCGTGAAATTTTGCGCCGGTTACCTGAAGATCGTCAGACTTTGTTATTCTCTGCCAC
TCTTCCGAAACAACTAGTGGAATTCGCAAAAGCAGGTTTAAACGACCCTACACTGGTTAG
ACTCGATCTCGATTCAAAATTAAGTGATCAACTAAAGTTAGCCTTCCTCCATTTGCGGGA
AGATGACAAACTTCCAATTCTTATTCATCTTCTCCGCAATGTGTTCAAAGAAACCGAGCA
ATCAGTCGTCTTTGTACCAACCAAACATCATGTAGAATATGTCAAGGATGTATTACAACT
GCTGGGCATGAGCTGCTCTTACGTTTACAGCAGCCTCGACCAGACGGCTCGGAAAATTAA
CATTGCAAAGTTCCGGAACAAGAAGACAATGGTGTTGATTGTTACGGATGTGGCAGCGAG
AGGACTTGACATTCCGATGTTGGATAACGTGGTCAATTACTCCTTTCCTGCCAAATCTAA
ACTTTTTGTCCACAGAGTGGGCCGGGTAGCGAGAGCGGGTCGTACGGGAACTGCTTACTC
CCTCGTGTGTCAGGATGAGCTTGCTTACGCCATTGATCTACATCTTTTTCTTGGTCGACC
GTTAAACTTCGCAAAATCCGGACACACATACCAGGTTTGGGACAACGTATACGGGGCAGT
GTCGCAGAGAGTGGTGGATGAAGAACAAGCCACTCTGGAAAACTTTAGGAAAAACAGCAC
CTTGCAAGAGCTGCTTAAAATCTCCCAAAATGCGTACAATGAACCAGCACATAAACAATG
CATCTCGATTCCAAATTCTATATATTTTTTTAATGTTTTTGTTTTGATCATTCTTGGCAA
CTCTTCACTATATGAAAGTTCTGACAAATCTGAAGAGGCCAGGTTGAATTTATTGTCAAG
TGTTCGTCAATATAAACCAAATTCTACGATTTTTGAAATTGGGGCAACCACGAAAAGCTC
TGGGGCTGTTGTGATGAAGAAAACGCGGAAACGAAACATGAAGTTTGTCGAACTGCACCG
GGAAAAAGTGAAAAAACTAAGCGAGAAAAATGAACAAGAATTTTCAAAACCGGAAATTAA
CGATACCGATGAAAAACCCATTGAAGAAGAAACTTTGAAGAGCGCATTTACTACAATAGT
GCGACCTAGCAACAAAATGAGAGAATTTTCAGAGTCGAAAAAAAAGAAAAAAAGAAGAGC
TTCAAATTTTAAAGACAACGATTTTTATATTGACTACAAGCCAAAGGACTATAACACTGA
AGCTGGTTTGAGCATAGGGGAAAGTCGAACGAACTTTGCGAAAGAAGCATCCAATCTTAC
TCTGGATCTTATTGGAGATGAGGACAAAATGCTTCGGCAGCAAAAATTGCAACAAAAGGT
TTGGGATAGGAAGAAAAAGCGATTTGTAAATGCCCAGGATTCTTCGGGATTGGGAAAGAA
GAAGATCAGGACCGAAAGTGGAGCAGTCATCTCCTCCACATACAAGAAGAACATCTACCA
GGAGTGGAAGAAGAAAACGAAATTGAACGATCGGAATGAAGATTCCCATCGAAGTGATGG
CACCAGTGGAAGATGGCAATCTGGAAAAAGAAACAATACAGTTGGAAAGCAACAAAACTC
AAAATCGAAAGTTAAATCTGAACTAAAGCGACCAGAACAGATTTTAAAACAACGTAAATT
GCAAGCGCAAAAGAAGAAAAATCGACAAAATAGAGGAAGAAAACAA
PANTHER |
DDX54/DBP10 (IPR033517) - T[3-649] 4.9E-158 |
ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[23-51] 9.745 |
SMART |
Helicase_ATP-bd (IPR014001) - T[42-238] 1.4E-58 |
Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[47-212] 1.3E-50 |
ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[54-226] 32.697 |
SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[93-378] 1.72E-66 |
ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[172-180] . |
CDD |
Helicase_C (IPR001650) - T[247-368] 2.71326E-32 |
Pfam |
Helicase_C (IPR001650) - T[250-360] 2.7E-22 |
ProSiteProfiles |
Helicase_C (IPR001650) - T[253-405] 17.57 |
SMART |
Helicase_C (IPR001650) - T[279-360] 1.0E-23 |
ProDom |
DBP10_C (IPR012541) - T[619-718] 2.0E-14 |
Pfam |
DBP10_C (IPR012541) - T[629-692] 8.3E-18 |
SMART |
DBP10_C (IPR012541) - T[629-692] 1.6E-26 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
DDX46_HUMAN | 36.872 % | 248 | 3.69E-70 |
DDX27_HUMAN | 37.853 % | 257 | 1.99E-74 |
DDX54_HUMAN | 50.83 % | 731 | 0 |