Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 688

>Cisavi.CG.ENS81.R0.1645747-1662899.15374.p
KKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILSDKDVVAMARTGSGKTAAFL
IPMFEKLQVTQSGAGARALLLSPTRELALQTFKFVKELGKYTSLRTACILGGDSMSEQFS
AMHENPDVIIATPGRLMHVLVEMELRLSNMHYVVFDEADRLFELGFQEHLREILRRLPED
RQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKLAFLHLREDDKLPILIHLL
RNVFKETEQSVVFVPTKHHVEYVKDVLQLLGMSCSYVYSSLDQTARKINIAKFRNKKTMV
LIVTDVAARGLDIPMLDNVVNYSFPAKSKLFVHRVGRVARAGRTGTAYSLVCQDELAYAI
DLHLFLGRPLNFAKSGHTYQGMLDKLVVDEEQATLENFRKNSTLQELLKISQNAYNKNSF
VGHPYFTNIYIQKRTFFTVYNVLVQEYTAIFQYCCHANQDFRSNSWTWNKKCMYNSDKSE
EARLNLLSSVRQYKPNSTIFEIGATTKSSGAVVMKKTRKRNMKFVELHREKVKKLSEKNE
QEFSKPEINDTDEKPIEEETLKKKRRASNFKDNDFYIDYKPKDYNTEAGIGESRTNFAKE
ASNLTLDLIGDEDKMLRQQKLQQKVWDRKKKRFVNAQDSSGLGKKKIRTESGAVISSTYK
KNIYQEWKKKTKLNDRNEDSHRSDGTSG

Nucleotide sequence

Length: 2,265

>Cisavi.CG.ENS81.R0.1645747-1662899.15374.t
AAATTTAACATAAACATGAAAAAAGAAGACATTCCATCGGATAGCGAGGGGGAGGTTGAT
TTAGATATTGAACCATCCAGTTCCACCACAAAGAAGGGCGGACAGGGCGACATCAATGAG
TTGTTGTCCATCCTGGATGATGGCTACACCTCTGAGGCGGAACTTAATACGAGGAAACTC
GTCACTCAAATGAATCGTAAAAAAAAGAAATCTGGAGGTTTCCAGTCAATGGGTTTATCC
CATTCAGTATTCAAAGGTGTAATTCGAAAAGGTTACAAAGTGCCAACACCCATTCAGAGA
AAGTGTATACCTCTTATTTTGAGCGATAAAGATGTGGTAGCAATGGCGCGGACTGGCAGT
GGGAAAACTGCTGCGTTTCTTATTCCCATGTTCGAAAAGTTACAAGTCACCCAAAGTGGA
GCAGGTGCAAGGGCATTGCTGCTGTCACCTACCAGGGAGCTTGCTCTGCAGACTTTCAAG
TTTGTCAAAGAGCTTGGAAAGTACACATCCCTACGAACGGCTTGTATTTTGGGGGGTGAC
AGTATGAGCGAGCAGTTTTCTGCGATGCATGAAAATCCGGATGTAATTATCGCTACCCCT
GGACGACTAATGCATGTGCTCGTGGAAATGGAACTGCGATTGTCCAATATGCACTACGTG
GTGTTTGATGAAGCTGATCGGTTATTTGAGCTGGGTTTTCAAGAGCATCTTCGTGAAATT
TTGCGCCGGTTACCTGAAGATCGTCAGACTTTGTTATTCTCTGCCACTCTTCCGAAACAA
CTAGTGGAATTCGCAAAAGCAGGTTTAAACGACCCTACACTGGTTAGACTCGATCTCGAT
TCAAAATTAAGTGATCAACTAAAGTTAGCCTTCCTCCATTTGCGGGAAGATGACAAACTT
CCAATTCTTATTCATCTTCTCCGCAATGTGTTCAAAGAAACCGAGCAATCAGTCGTCTTT
GTACCAACCAAACATCATGTAGAATATGTCAAGGATGTATTACAACTGCTGGGCATGAGC
TGCTCTTACGTTTACAGCAGCCTCGACCAGACGGCTCGGAAAATTAACATTGCAAAGTTC
CGGAACAAGAAGACAATGGTGTTGATTGTTACGGATGTGGCAGCGAGAGGACTTGACATT
CCGATGTTGGATAACGTGGTCAATTACTCCTTTCCTGCCAAATCTAAACTTTTTGTCCAC
AGAGTGGGCCGGGTAGCGAGAGCGGGTCGTACGGGAACTGCTTACTCCCTCGTGTGTCAG
GATGAGCTTGCTTACGCCATTGATCTACATCTTTTTCTTGGTCGACCGTTAAACTTCGCA
AAATCCGGACACACATACCAGGGTATGTTAGACAAGTTAGTGGTGGATGAAGAACAAGCC
ACTCTGGAAAACTTTAGGAAAAACAGCACCTTGCAAGAGCTGCTTAAAATCTCCCAAAAT
GCGTACAATAAAAATAGTTTTGTTGGCCATCCATATTTTACCAATATATATATACAAAAA
AGAACTTTTTTTACAGTTTATAATGTACTGGTACAAGAGTACACTGCAATATTCCAATAT
TGTTGTCATGCCAACCAAGATTTCCGTTCAAATTCATGGACATGGAATAAAAAATGCATG
TACAATTCTGACAAATCTGAAGAGGCCAGGTTGAATTTATTGTCAAGTGTTCGTCAATAT
AAACCAAATTCTACGATTTTTGAAATTGGGGCAACCACGAAAAGCTCTGGGGCTGTTGTG
ATGAAGAAAACGCGGAAACGAAACATGAAGTTTGTCGAACTGCACCGGGAAAAAGTGAAA
AAACTAAGCGAGAAAAATGAACAAGAATTTTCAAAACCGGAAATTAACGATACCGATGAA
AAACCCATTGAAGAAGAAACTTTGAAGAAAAAAAGAAGAGCTTCAAATTTTAAAGACAAC
GATTTTTATATTGACTACAAGCCAAAGGACTATAACACTGAAGCTGGCATAGGGGAAAGT
CGAACGAACTTTGCGAAAGAAGCATCCAATCTTACTCTGGATCTTATTGGAGATGAGGAC
AAAATGCTTCGGCAGCAAAAATTGCAACAAAAGGTTTGGGATAGGAAGAAAAAGCGATTT
GTAAATGCCCAGGATTCTTCGGGATTGGGAAAGAAGAAGATCAGGACCGAAAGTGGAGCA
GTCATCTCCTCCACATACAAGAAGAACATCTACCAGGAGTGGAAGAAGAAAACGAAATTG
AACGATCGGAATGAAGATTCCCATCGAAGTGATGGCACCAGTGGA

InterProScan

PANTHER	DDX54/DBP10 (IPR033517) - T[1-622] 3.0E-157
ProSiteProfiles	RNA_helicase_DEAD_Q_motif (IPR014014) - T[5-33] 9.745
SMART	Helicase_ATP-bd (IPR014001) - T[24-220] 1.4E-58
Pfam	DEAD/DEAH_box_helicase_dom (IPR011545) - T[29-194] 1.1E-50
ProSiteProfiles	Helicase_ATP-bd (IPR014001) - T[36-208] 32.697
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[75-360] 1.37E-66
ProSitePatterns	RNA-helicase_DEAD-box_CS (IPR000629) - T[154-162] .
CDD	Helicase_C (IPR001650) - T[229-350] 1.80113E-32
Pfam	Helicase_C (IPR001650) - T[232-342] 2.3E-22
ProSiteProfiles	Helicase_C (IPR001650) - T[235-387] 17.814
SMART	Helicase_C (IPR001650) - T[261-342] 1.0E-23
ProDom	DBP10_C (IPR012541) - T[597-688] 2.0E-14
SMART	DBP10_C (IPR012541) - T[607-670] 1.6E-26
Pfam	DBP10_C (IPR012541) - T[607-670] 7.3E-18