- Clone 'cima879905' >
- Transcript 'Cisavi.CG.ENS81.R1.7...' >
- Transcript 'Cisavi.CG.ENS81.R17....' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1645747-1662899.15375.t
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
R0 [1,647,759 / 1,662,899]
>Cisavi.CG.ENS81.R0.1645747-1662899.15375.p
SEAELNTRKLVTQMNRKKKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILSDK
DVVAMARTGSGKTAAFLIPMFEKLQVTQSGAGARALLLSPTRELALQTFKFVKELGKYTS
LRTACILGGDSMSEQFSAMHENPDVIIATPGRLMHVLVEMELRLSNMHYVVFDEADRLFE
LGFQEHLREILRRLPEDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKLA
FLHLREDDKLPILIHLLRNVFKETEQSVVFVPTKHHVEYVKDVLQLLGMSCSYVYSSLDQ
TARKINIAKFRNKKTMVLIVTDVAARGLDIPMLDNVVNYSFPAKSKLFVHRVGRVARAGR
TGTAYSLVCQDELAYAIDLHLFLGRPLNFAKSGHTYQVWDNVYGAVSQRVVDEEQATLEN
FRKNSTLQELLKISQNAYNKNSFVGHPYFTNIYIQKRTFFTVYNVLVQDSDKSEEARLNL
LSSVRQYKPNSTIFEIGATTKSSGAVVMKKTRKRNMKFVELHREKVKKLSEKNEQEFSKP
EINDTDEKPIEEETLKSAFTTIVRPSNKMREFSESKKKKKRRASNFKDNDFYIDYKPKDY
NTEAGLSIGESRTNFAKEASNLTLDLIGDEDKMLRQQKLQQKVWDRKKKRFVNAQDSSGL
GKKKIRTESGAVISSTYKKNIYQEWKKKTKLNDRNEDSHRSDGTSGRWQSGKRNNTVGKQ
QNSKSKVKSELKRPEQILKQRKLQAQKKKNRQNRGRKQRR
>Cisavi.CG.ENS81.R0.1645747-1662899.15375.t
AGGGGGAGGTTGATTTAGATATTGAACCATCCAGTTCCACCACAAAGAAGGGCGGACAGG
GCGACATCAATGAGTTGTTGTCCATCCTGGATGATGGCTACACCTCTGAGGCGGAACTTA
ATACGAGGAAACTCGTCACTCAAATGAATCGTAAAAAAAAGAAATCTGGAGGTTTCCAGT
CAATGGGTTTATCCCATTCAGTATTCAAAGGTGTAATTCGAAAAGGTTACAAAGTGCCAA
CACCCATTCAGAGAAAGTGTATACCTCTTATTTTGAGCGATAAAGATGTGGTAGCAATGG
CGCGGACTGGCAGTGGGAAAACTGCTGCGTTTCTTATTCCCATGTTCGAAAAGTTACAAG
TCACCCAAAGTGGAGCAGGTGCAAGGGCATTGCTGCTGTCACCTACCAGGGAGCTTGCTC
TGCAGACTTTCAAGTTTGTCAAAGAGCTTGGAAAGTACACATCCCTACGAACGGCTTGTA
TTTTGGGGGGTGACAGTATGAGCGAGCAGTTTTCTGCGATGCATGAAAATCCGGATGTAA
TTATCGCTACCCCTGGACGACTAATGCATGTGCTCGTGGAAATGGAACTGCGATTGTCCA
ATATGCACTACGTGGTGTTTGATGAAGCTGATCGGTTATTTGAGCTGGGTTTTCAAGAGC
ATCTTCGTGAAATTTTGCGCCGGTTACCTGAAGATCGTCAGACTTTGTTATTCTCTGCCA
CTCTTCCGAAACAACTAGTGGAATTCGCAAAAGCAGGTTTAAACGACCCTACACTGGTTA
GACTCGATCTCGATTCAAAATTAAGTGATCAACTAAAGTTAGCCTTCCTCCATTTGCGGG
AAGATGACAAACTTCCAATTCTTATTCATCTTCTCCGCAATGTGTTCAAAGAAACCGAGC
AATCAGTCGTCTTTGTACCAACCAAACATCATGTAGAATATGTCAAGGATGTATTACAAC
TGCTGGGCATGAGCTGCTCTTACGTTTACAGCAGCCTCGACCAGACGGCTCGGAAAATTA
ACATTGCAAAGTTCCGGAACAAGAAGACAATGGTGTTGATTGTTACGGATGTGGCAGCGA
GAGGACTTGACATTCCGATGTTGGATAACGTGGTCAATTACTCCTTTCCTGCCAAATCTA
AACTTTTTGTCCACAGAGTGGGCCGGGTAGCGAGAGCGGGTCGTACGGGAACTGCTTACT
CCCTCGTGTGTCAGGATGAGCTTGCTTACGCCATTGATCTACATCTTTTTCTTGGTCGAC
CGTTAAACTTCGCAAAATCCGGACACACATACCAGGTTTGGGACAACGTATACGGGGCAG
TGTCGCAGAGAGTGGTGGATGAAGAACAAGCCACTCTGGAAAACTTTAGGAAAAACAGCA
CCTTGCAAGAGCTGCTTAAAATCTCCCAAAATGCGTACAATAAAAATAGTTTTGTTGGCC
ATCCATATTTTACCAATATATATATACAAAAAAGAACTTTTTTTACAGTTTATAATGTAC
TGGTACAAGATTCTGACAAATCTGAAGAGGCCAGGTTGAATTTATTGTCAAGTGTTCGTC
AATATAAACCAAATTCTACGATTTTTGAAATTGGGGCAACCACGAAAAGCTCTGGGGCTG
TTGTGATGAAGAAAACGCGGAAACGAAACATGAAGTTTGTCGAACTGCACCGGGAAAAAG
TGAAAAAACTAAGCGAGAAAAATGAACAAGAATTTTCAAAACCGGAAATTAACGATACCG
ATGAAAAACCCATTGAAGAAGAAACTTTGAAGAGCGCATTTACTACAATAGTGCGACCTA
GCAACAAAATGAGAGAATTTTCAGAGTCGAAAAAAAAGAAAAAAAGAAGAGCTTCAAATT
TTAAAGACAACGATTTTTATATTGACTACAAGCCAAAGGACTATAACACTGAAGCTGGTT
TGAGCATAGGGGAAAGTCGAACGAACTTTGCGAAAGAAGCATCCAATCTTACTCTGGATC
TTATTGGAGATGAGGACAAAATGCTTCGGCAGCAAAAATTGCAACAAAAGGTTTGGGATA
GGAAGAAAAAGCGATTTGTAAATGCCCAGGATTCTTCGGGATTGGGAAAGAAGAAGATCA
GGACCGAAAGTGGAGCAGTCATCTCCTCCACATACAAGAAGAACATCTACCAGGAGTGGA
AGAAGAAAACGAAATTGAACGATCGGAATGAAGATTCCCATCGAAGTGATGGCACCAGTG
GAAGATGGCAATCTGGAAAAAGAAACAATACAGTTGGAAAGCAACAAAACTCAAAATCGA
AAGTTAAATCTGAACTAAAGCGACCAGAACAGATTTTAAAACAACGTAAATTGCAAGCGC
AAAAGAAGAAAAATCGACAAAATAGAGGAAGAAAACAAAGACGTTAG
PANTHER |
DDX54/DBP10 (IPR033517) - T[3-645] 2.0E-158 |
ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[22-50] 9.745 |
SMART |
Helicase_ATP-bd (IPR014001) - T[41-237] 1.4E-58 |
Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[46-211] 1.3E-50 |
ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[53-225] 32.697 |
SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[92-377] 1.71E-66 |
ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[171-179] . |
CDD |
Helicase_C (IPR001650) - T[246-367] 3.58393E-32 |
Pfam |
Helicase_C (IPR001650) - T[249-359] 2.7E-22 |
ProSiteProfiles |
Helicase_C (IPR001650) - T[252-404] 17.57 |
SMART |
Helicase_C (IPR001650) - T[278-359] 1.0E-23 |
ProDom |
DBP10_C (IPR012541) - T[615-697] 4.0E-14 |
Pfam |
DBP10_C (IPR012541) - T[625-688] 8.3E-18 |
SMART |
DBP10_C (IPR012541) - T[625-688] 1.6E-26 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
DDX46_HUMAN | 36.872 % | 249 | 3.23E-70 |
DDX27_HUMAN | 37.853 % | 257 | 1.68E-74 |
DDX54_HUMAN | 49.681 % | 712 | 0 |