- Transcript 'KH2012:KH.L41.13.v1....' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1645747-1662899.15376.t
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
R0 [1,648,394 / 1,652,592]
Amino acid sequence
Length: 339
>Cisavi.CG.ENS81.R0.1645747-1662899.15376.p
NWMGPLMNFIDWRLSHSVFKGVIRKGYKVPTPIQRKCIPLILSDKDVVAMARTGSGKTAA
FLIPMFEKLQVTQSGAGARALLLSPTRELALQTFKFVKELGKYTSLRTACILGGDSMSEQ
FSAMHENPDVIIATPGRLMHVLVEMELRLSNMHYVVFDEADRLFELGFQEHLREILRRLP
EDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLKLAFLHLREDDKLPILIH
LLRNVFKETEQSVVFVPTKHHVEYVKDVLQLLGMSCSYVYSSLDQTARKINIAKFRNKKT
MVLIVTDVAARGLDIPMLDNVVNYSFPAKSKLFVHRVGK
Nucleotide sequence
Length: 1,017
>Cisavi.CG.ENS81.R0.1645747-1662899.15376.t
AATTGGATGGGTCCACTGATGAACTTTATAGATTGGCGTTTATCCCATTCAGTATTCAAA
GGTGTAATTCGAAAAGGTTACAAAGTGCCAACACCCATTCAGAGAAAGTGTATACCTCTT
ATTTTGAGCGATAAAGATGTGGTAGCAATGGCGCGGACTGGCAGTGGGAAAACTGCTGCG
TTTCTTATTCCCATGTTCGAAAAGTTACAAGTCACCCAAAGTGGAGCAGGTGCAAGGGCA
TTGCTGCTGTCACCTACCAGGGAGCTTGCTCTGCAGACTTTCAAGTTTGTCAAAGAGCTT
GGAAAGTACACATCCCTACGAACGGCTTGTATTTTGGGGGGTGACAGTATGAGCGAGCAG
TTTTCTGCGATGCATGAAAATCCGGATGTAATTATCGCTACCCCTGGACGACTAATGCAT
GTGCTCGTGGAAATGGAACTGCGATTGTCCAATATGCACTACGTGGTGTTTGATGAAGCT
GATCGGTTATTTGAGCTGGGTTTTCAAGAGCATCTTCGTGAAATTTTGCGCCGGTTACCT
GAAGATCGTCAGACTTTGTTATTCTCTGCCACTCTTCCGAAACAACTAGTGGAATTCGCA
AAAGCAGGTTTAAACGACCCTACACTGGTTAGACTCGATCTCGATTCAAAATTAAGTGAT
CAACTAAAGTTAGCCTTCCTCCATTTGCGGGAAGATGACAAACTTCCAATTCTTATTCAT
CTTCTCCGCAATGTGTTCAAAGAAACCGAGCAATCAGTCGTCTTTGTACCAACCAAACAT
CATGTAGAATATGTCAAGGATGTATTACAACTGCTGGGCATGAGCTGCTCTTACGTTTAC
AGCAGCCTCGACCAGACGGCTCGGAAAATTAACATTGCAAAGTTCCGGAACAAGAAGACA
ATGGTGTTGATTGTTACGGATGTGGCAGCGAGAGGACTTGACATTCCGATGTTGGATAAC
GTGGTCAATTACTCCTTTCCTGCCAAATCTAAACTTTTTGTCCACAGAGTGGGTAAG
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[3-211] 9.69E-66 - T[149-339] 1.01E-40 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[7-35] 8.882 |
| PANTHER |
DDX54/DBP10 (IPR033517) - T[9-338] 1.8E-136 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[26-222] 1.4E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[31-196] 2.5E-51 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[38-210] 32.697 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[156-164] . |
| CDD |
Helicase_C (IPR001650) - T[231-338] 2.58787E-25 |
| Pfam |
Helicase_C (IPR001650) - T[234-338] 7.6E-19 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[237-339] 13.9 |
| SMART |
Helicase_C (IPR001650) - T[263-339] 1.5E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX46_HUMAN | 35.484 % | 215 | 6.81E-63 |
| DDX27_HUMAN | 35.799 % | 222 | 2.6E-66 |
| DDX54_HUMAN | 66.566 % | 466 | 8.41E-159 |