Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R0.1663547-1665481.15519.t

Possible name(s)

EXOSC4; EXOSC5; IQCA1

Gene model

Cisavi.CG.ENS81.R0.1663547-1665481

Location

R0 [1,663,546 / 1,665,481]

Sequences

Amino acid sequence

Length: 235

>Cisavi.CG.ENS81.R0.1663547-1665481.15519.p
MKDATNISVELPPTPPRKFNCEMNVLKNTDGSALYSEGDTEVMVGVYGPADLKENKQEVH
EALVDVDFRPKHGSPTLAEKYLMQFIQGVCENAIMLTLHPRTVFAIIVQIMQDQGSLLSC
AINATCMALQDAGIAMKYMPVAVTVAIKSEVHSDIEDPTDVIIVNPNLKEETESFAVLTY
VFDNVKQNLLCTHTRGPMLPKQHERCLETARGATERVLTFFRESITQKVAAGLEI

Nucleotide sequence

Length: 902

>Cisavi.CG.ENS81.R0.1663547-1665481.15519.t
TTATAATAGGAATTAACATGAAAGATGCAACAAATATTTCTGTGGAATTACCACCAACAC
CACCACGCAAGTTTAATTGTGAAATGAATGTTTTGAAGAATACTGATGGCTCTGCCCTTT
ATTCAGAAGGTGACACCGAGGTTATGGTTGGAGTGTACGGACCTGCAGATCTCAAAGAAA
ACAAGCAAGAAGTCCATGAAGCCTTGGTTGATGTCGATTTCCGTCCAAAGCACGGCAGCC
CAACTCTAGCGGAAAAGTATCTGATGCAGTTTATCCAGGGTGTTTGTGAGAATGCCATAA
TGTTGACGCTTCATCCACGAACTGTTTTTGCAATCATTGTTCAAATTATGCAAGACCAGG
GCTCTTTACTTTCCTGTGCTATTAATGCCACGTGTATGGCACTACAAGACGCTGGCATTG
CCATGAAGTACATGCCTGTGGCTGTAACCGTAGCCATAAAATCTGAAGTCCACAGTGACA
TTGAGGACCCTACGGATGTTATTATCGTAAACCCAAATTTAAAAGAAGAAACCGAATCGT
TTGCCGTCCTGACATACGTGTTTGACAATGTTAAACAGAATCTGCTGTGCACGCACACCC
GAGGACCTATGTTACCAAAGCAACACGAAAGATGTCTCGAAACCGCACGAGGTGCTACTG
AACGCGTCTTAACCTTTTTTAGAGAATCGATCACTCAAAAAGTGGCTGCTGGATTAGAAA
TTTGAAAAAAAAGGATTAATGAATCGAGCGGTATGCTACAAATACATCCAATTTATTACC
CAACCCAAGGGTTACCATAGTTTATTCGGTTCATCTGGCCTTCAGAAAAGATCAAGCAAT
TGATATGGGGTCTTTTAGACAGATTTTTTAGGATTTTTAATGCTGTATTTCTATATATTA
AG

InterProScan

Gene3D	PNPase/RNase_PH_dom_sf (IPR027408) - T[16-231] 8.8E-53
SUPERFAMILY	Ribosomal_S5_D2-typ_fold (IPR020568) - T[16-134] 4.66E-28
Pfam	ExoRNase_PH_dom1 (IPR001247) - T[17-134] 1.0E-21
SUPERFAMILY	ExoRNase_PH_dom2_sf (IPR036345) - T[136-229] 2.29E-13
Pfam	ExoRNase_PH_dom2 (IPR015847) - T[139-211] 6.0E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EXOS5_HUMAN	38.326 %	164	2.01E-50