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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R183...' > 
  3. Transcript 'Cisavi.CG.ENS81.R79....' > 
  4. Transcript 'Harore.CG.MTP2014.S2...' > 
  5. Transcript 'Cisavi.CG.ENS81.R0.1...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R0.1667459-1675427.15525.t

Possible name(s)

ABCD2; ABCD3; ABCD4

Gene model

Cisavi.CG.ENS81.R0.1667459-1675427

Location

R0 [1,672,492 / 1,675,427]

Sequences

Amino acid sequence

Length: 213

>Cisavi.CG.ENS81.R0.1667459-1675427.15525.p
MINTPGKSATLLQNLSVCLSEGKNILVTGPTGSGKTSLLRILAGLWPVESGSLKRYLNFG
TGGVMFLPQKPYLTEGTLQDQVLYPMQESSTLINDVENNNKIKEIIDEVGLSDLFYNNSD
SVERRELNWSDKLSPGEAQRLAFARLFYHSPKLAVLDEPTSGLDTAMTDNLFLSCIKRKI
TYFTVGHGSTLQKHHDVELRFYGDGDWSIITLL

Nucleotide sequence

Length: 800

>Cisavi.CG.ENS81.R0.1667459-1675427.15525.t
GTTTACTTCTCTGTTGACAATGTTATGATTAACACTCCTGGCAAAAGTGCAACGCTTCTG
CAAAATCTGTCTGTCTGTTTATCGGAAGGCAAGAATATTTTGGTCACTGGACCCACCGGT
TCTGGGAAGACTTCCCTTCTTAGGATCCTAGCCGGATTGTGGCCGGTTGAATCTGGAAGT
TTGAAGAGATATTTGAACTTTGGAACTGGAGGTGTTATGTTTTTGCCGCAAAAACCTTAT
CTGACAGAAGGAACTTTGCAAGACCAGGTTCTTTATCCGATGCAAGAATCATCCACTCTT
ATAAACGATGTTGAAAATAACAATAAAATAAAAGAAATAATAGATGAAGTTGGACTAAGC
GATTTGTTCTATAACAATTCCGATTCAGTTGAAAGGAGAGAGTTGAACTGGAGTGATAAG
CTTTCACCAGGAGAAGCCCAACGTTTGGCCTTTGCTCGGCTGTTCTACCACAGCCCAAAG
CTGGCAGTATTGGATGAACCAACAAGTGGGCTAGATACAGCAATGACGGACAATTTATTC
CTGTCGTGCATCAAGCGGAAAATCACATATTTCACTGTCGGCCACGGGAGTACTTTGCAA
AAGCATCATGATGTGGAATTACGCTTCTATGGAGACGGAGATTGGTCAATAATCACCCTA
CTTTAGACTAAAACGTATGGATGTATTAGGTGCAATAAAAATATGATTTCTTGTGTTTTA
AATTTCCTTTCTTGATTTTAAAATATGATTTATTGGTAAAGTGCCATGGCTGTATTTTTA
ATTGTCTTTTTCGCTGTACT

InterProScan

ProSiteProfiles
ABC_transporter-like (IPR003439) - T[2-212] 12.078
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[7-199] 2.11E-30
Pfam
ABC_transporter-like (IPR003439) - T[12-161] 2.9E-21
SMART
AAA+_ATPase (IPR003593) - T[21-206] 1.1E-9
ProSitePatterns
ABC_transporter_CS (IPR017871) - T[133-147] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ABCD4_HUMAN 42.18 % 177 1.24E-52
ABCD3_HUMAN 39.024 % 144 5.97E-40
ABCD1_HUMAN 35.545 % 129 1.55E-34