- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C10.87.v1....' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1681130-1688442.15610.t
Possible name(s)
KHDRBS2; QKI; SF1
Gene model
Location
R0 [1,681,129 / 1,688,442]
Amino acid sequence
Length: 578
>Cisavi.CG.ENS81.R0.1681130-1688442.15610.p
PAGAPPASTDDRGRPRKKRSRWSSAAVKTEIPGMPTSVSANLTPQQQKAYIVQLQIEDVS
RKLKLGDLGIPANPEDRSPSPEPIYNGEGKRMNTREYRTRKKLEEERHRLIIHMQDINPE
FKPPMDYKPPQARVSERVMIPQDMNPNINFVGLLIGPRGNTLKKIEKDSNCKIMIRGKGS
VKEGKIGRKDGQPLPGEDEPLHALVSSSTIECVKKAVTEINKIIKQGIEQPEEDNDLRKL
QLMELAKLNGTLREDLMPKERAWLKPENQNITNTTVCTKCGGRGHLVQDCRADHPSNQLQ
QMDAGGNVDRAKMDSEYQSLMAELGEGPPSGDGNNGGSARGGFNNFQGGQNRFQSQRAPW
MAPRPRFGGPGGPRQRFNNSNRGGYGNRPSMMNQGGPPPWMQSGPYGGQGAPNQWAPPGG
MNQSYGGGDVPPWMQQPDGSGSMMGPPMGFSADGSNSGGNYFNQPPPPPPGNAPQPPPPP
SSGANSNAPPWQQWGGDQGDQSKNQSSSGNQGGDCKYILVHIGGAPPMPSGPGPVPPPPP
GGQSSGQDGMGGMDYSMGMNMGMMNYGMPPAPPPPPPQ
Nucleotide sequence
Length: 2,027
>Cisavi.CG.ENS81.R0.1681130-1688442.15610.t
TTTTATAAAACATGCCAAGGAGTCAAAGCAACAGTTTTACCGGCGCCAATGCAATTCCCC
TTGGATCGAGGAACAAAGCAATCGGTGCTAAAAGAGGATTCACTTCATCCCCTCCCAGAC
ACGAGGAACCAAAGAAACCAATGGGATCATTGGCTGCCAGCACAAATGCCACACTCGCGT
TAAAAGCAGCCCAAGCCGCGGCTGCTAATCTGGCCAAACTTGCGCAAAGGAATGCTGCTA
CAGCTGGCAATGATGGAAACAAATGGACGCCTGCTCAGAACCAACCAAATCCTGCTGGTG
CACCTCCGGCAAGTACAGATGATCGTGGAAGACCCAGGAAGAAGAGGAGCAGATGGAGTA
GTGCTGCCGTCAAAACTGAGATTCCTGGCATGCCGACCTCTGTCTCAGCCAACCTCACTC
CACAACAGCAGAAAGCTTATATAGTTCAGCTACAGATCGAGGACGTATCAAGAAAACTCA
AGTTGGGCGATCTAGGAATCCCTGCGAACCCCGAGGACAGGTCCCCGTCTCCGGAGCCGA
TCTATAATGGGGAGGGGAAGAGGATGAATACAAGGGAGTATCGGACAAGGAAGAAACTGG
AAGAAGAGCGACACAGACTGATCATCCACATGCAGGACATCAACCCTGAGTTTAAACCAC
CTATGGATTACAAGCCGCCACAAGCTCGAGTCAGTGAGAGAGTTATGATTCCACAAGATA
TGAATCCAAATATCAACTTTGTTGGTTTGCTCATCGGACCCAGGGGAAATACCCTGAAGA
AAATTGAAAAAGATAGCAACTGCAAGATCATGATTCGAGGCAAAGGGTCGGTGAAAGAGG
GAAAGATAGGAAGAAAGGATGGCCAGCCACTTCCTGGCGAGGATGAGCCACTTCATGCAC
TTGTATCCTCCAGTACTATCGAATGTGTGAAGAAAGCCGTCACTGAAATCAACAAGATCA
TTAAACAGGGTATAGAGCAGCCGGAAGAAGACAACGATTTGCGGAAACTTCAGCTCATGG
AGCTCGCCAAGTTGAATGGCACCCTGCGTGAAGACTTGATGCCAAAAGAGCGAGCGTGGT
TGAAACCAGAGAACCAGAACATCACAAACACCACGGTGTGCACCAAGTGTGGTGGACGTG
GTCACTTGGTGCAAGATTGCCGAGCAGATCACCCAAGCAACCAGCTGCAACAGATGGACG
CTGGTGGGAATGTGGACCGTGCTAAAATGGACAGCGAGTATCAATCGCTCATGGCCGAGT
TGGGTGAAGGACCCCCATCGGGGGATGGAAACAATGGAGGGTCCGCTCGTGGTGGGTTCA
ACAACTTTCAAGGAGGTCAGAATCGATTCCAGAGTCAGCGCGCTCCGTGGATGGCCCCCC
GGCCTCGTTTTGGTGGCCCGGGTGGCCCTCGACAGAGGTTTAATAATTCGAATCGTGGTG
GTTATGGAAACAGGCCATCTATGATGAATCAAGGGGGACCTCCACCTTGGATGCAGTCGG
GACCATATGGTGGTCAGGGGGCGCCCAACCAGTGGGCTCCTCCTGGAGGCATGAACCAAT
CTTATGGGGGTGGTGATGTGCCCCCATGGATGCAGCAACCTGATGGCAGTGGGAGCATGA
TGGGGCCACCGATGGGTTTCTCTGCCGATGGTAGCAATTCCGGGGGTAATTATTTCAATC
AGCCCCCACCACCACCCCCAGGAAATGCACCACAGCCACCGCCCCCACCAAGTTCTGGCG
CCAACTCCAATGCTCCCCCGTGGCAACAGTGGGGTGGGGATCAAGGGGACCAGTCGAAGA
ACCAAAGCAGCAGCGGCAACCAGGGTGGTGATTGTAAGTATATCCTTGTTCACATTGGTG
GCGCTCCCCCAATGCCCAGTGGACCCGGCCCGGTACCCCCTCCACCCCCTGGCGGTCAAA
GTTCGGGTCAGGATGGCATGGGTGGGATGGATTACTCTATGGGGATGAATATGGGGATGA
TGAATTACGGGATGCCCCCTGCCCCACCACCACCTCCACCACAATAA
| PANTHER |
BBP/SF1 (IPR031150) - T[12-492] 1.1E-153 - T[524-576] 1.1E-153 |
| Pfam |
SF1-HH (IPR032570) - T[19-128] 7.5E-40 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[72-258] 3.3E-52 |
| SMART |
KH_dom (IPR004087) - T[132-225] 2.5E-12 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[134-251] 5.86E-25 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[136-221] 3.3E-8 |
| SMART |
Znf_CCHC (IPR001878) - T[276-292] 0.0068 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[277-291] 9.158 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF01_HUMAN | 66.667 % | 432 | 5.61E-145 |
| QKI_HUMAN | 37.879 % | 88.6 | 4.55E-19 |