- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1706014-1723939.15666.t
Possible name(s)
NOTCH1; NOTCH2; NOTCH3
Gene model
Location
R0 [1,706,013 / 1,717,531]
Amino acid sequence
Length: 231
>Cisavi.CG.ENS81.R0.1706014-1723939.15666.p
GACTDGVNSYTCTCTAGWQGTNCDSNIDDCAANPCVNGACTDGVNSYTCTCTAGWQGTNC
DQDINECSATNNCAVCQNLVPSYFCVCEISSYEGILCTWAVIGTTTYRVPATTTTTSRIA
AIAICAGLDEGGGFLGEPLAANLPTILTKVVARSTFVSGFMWLNVVRQSGSTWVYGATGT
VATTNFEFEANVLDNCAVMRVSDFKWIIVSCTSFTADILCQRAITGKVVSP
Nucleotide sequence
Length: 840
>Cisavi.CG.ENS81.R0.1706014-1723939.15666.t
ATGGAGCTTGCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGG
GAACCAACTGTGATTCAAATATAGATGATTGCGCTGCTAATCCTTGTGTGAATGGAGCTT
GCACTGATGGTGTTAACTCGTATACCTGCACTTGTACTGCTGGATGGCAGGGAACCAACT
GTGATCAAGATATTAATGAATGTTCCGCGACAAATAATTGTGCCGTTTGCCAAAATTTGG
TTCCTTCGTATTTCTGTGTCTGTGAAATATCAAGCTACGAAGGAATTTTATGCACATGGG
CGGTTATCGGTACAACGACATATCGGGTGCCTGCCACCACCACTACCACCAGCCGAATCG
CTGCAATCGCTATTTGTGCTGGTCTTGATGAAGGGGGTGGTTTCTTAGGTGAACCCCTTG
CTGCCAACTTGCCAACTATTCTCACAAAAGTTGTCGCCAGAAGCACATTTGTGTCTGGTT
TCATGTGGCTTAATGTGGTTCGACAATCAGGATCAACATGGGTGTATGGAGCAACCGGTA
CTGTCGCTACCACCAACTTTGAATTTGAGGCGAATGTGTTGGACAACTGTGCAGTGATGA
GAGTCAGTGATTTCAAATGGATCATTGTATCTTGCACCAGCTTCACCGCAGATATTTTGT
GCCAACGCGCAATTACCGGCAAAGTAGTGTCTCCTTAAACGTATTAAATTTTCTATTTTT
ATTTATTTCGTTTTGCAACTGTTGCCCATACTCGACTGCCAATTGTGAATATTATGTTTT
TTTTTATTTGCGTGAACAGAATTTTAAACATAATAAAAATATGATCGAGTGTCAAACATA
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[1-24] 0.12 - T[26-61] 1.0E-9 - T[63-98] 0.0071 |
| SMART |
EGF-like_dom (IPR000742) - T[1-24] 72.0 - T[29-61] 1.2E-5 - T[66-98] 23.0 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[1-24] 13.121 - T[26-61] 18.666 - T[63-98] 10.51 |
| Pfam |
EGF-like_CS (IPR013032) - T[1-18] 4.8E-4 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[3-14] . - T[40-51] . - T[76-87] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[12-23] . - T[12-23] . - T[49-60] . - T[49-60] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[26-49] . |
| Pfam |
EGF-like_dom (IPR000742) - T[30-58] 1.5E-5 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[113-224] 2.95E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOTC2_HUMAN | 45.833 % | 89.4 | 2.29E-20 |
| NOTC1_HUMAN | 43.333 % | 87 | 1.13E-19 |
| CRUM1_HUMAN | 39.252 % | 85.1 | 5.3E-19 |